LLPS-Mua-0271
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Replication protein A subunit |
| Ensembl Gene: | GSMUA_AchrUn_randomG18650_001 |
| Ensembl Protein: | GSMUA_AchrUn_randomP18650_001 |
| Organism: | Musa acuminata |
| Taxa ID: | 214687 |
| LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Others | Predicted from orthologs | (View) |
▼ FUNCTION
| Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | GSMUA_AchrUn_randomT18650_001 | GSMUA_AchrUn_randomP18650_001 |
| UniProt | M0UAC4, M0UAC4_MUSAM |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAAVDLTQGA IAAISEGRAE EGARPVVQVW DVKLMNGLVK SGALQKYSIV QLNEFICNVI 60 61 QNRRIIIVIN LEVLVSSSNG IGEPKLYDNV SLNPKSEPMT NNSSFGGSYV QPAYQQPPPL 120 121 YTNRGPIAKN EAPARIIPIS ALNPYQGRWT IKARVTTKSE LRRYNNPRGE GKVFSFDLLD 180 181 SDGGEIRVTC FNVVADQFYD QIEVGKVYLI SKGSLKPAQK SFNHLNNEYE IFLEAQSVIQ 240 241 PCLEEDNTIP KQQFNFRPIN EIEGLENNTM VDVIGIVVSI NPSLSIMRKN GTETNKQTLQ 300 301 LKDMSGRIVE MTMWGKFCSI EGQQLQHMCD SGVCPVLAIK TGRVSDFNGK SVTTIGSSQL 360 361 FINPDFPEAH RLRDWYNREG KSMTAASISR ETTTTGRNDV RKTVSQIKDE GLGRSEKPDW 420 421 ITVKATITFI KVDNFCYTAC PLMVGDRPCN KKVNNNGDGT WHCDRCDQSF PECDYRYLLQ 480 481 FQIQDHTGMT WVTAFQECGE EILGVTAKEL YLLKYEEQDD LKFAEIIRTV LFHQYLFKLK 540 541 VKEETFSDEQ RVKSTVVKAE KINPSSESKY LLGLIEKLSS EDPSASKGTY GTSASTSGMA 600 601 NITYGTGESN FGNIHSGQSV GGGFSSTGSN ICFKCQQPGH WASECPGMGA AGSAYGDGGS 660 661 SGRYTNTRQH VGGF 674 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGCGG TGGATCTGAC GCAGGGGGCA ATAGCGGCGA TTTCGGAGGG GCGGGCGGAG 60 61 GAGGGTGCCA GGCCGGTGGT GCAGGTGTGG GACGTGAAGC TGATGAACGG ACTCGTTAAG 120 121 TCGGGGGCAC TGCAGAAGTA CTCCATCGTT CAGCTCAACG AGTTCATCTG TAACGTCATC 180 181 CAGAACCGCA GAATCATTAT TGTTATCAAC TTGGAAGTCC TTGTCAGCAG TAGTAATGGA 240 241 ATTGGAGAAC CAAAATTGTA TGATAATGTT TCTCTTAATC CCAAGTCAGA GCCTATGACA 300 301 AACAACTCAT CTTTTGGTGG TTCTTATGTT CAGCCTGCTT ATCAGCAACC CCCACCGCTG 360 361 TACACAAATA GAGGGCCTAT AGCCAAGAAT GAAGCTCCTG CTCGCATTAT TCCTATTTCT 420 421 GCTTTGAATC CTTACCAGGG CAGATGGACA ATTAAGGCAA GAGTGACAAC CAAGAGTGAA 480 481 CTTCGGCGCT ACAATAATCC TAGGGGGGAA GGGAAAGTCT TCTCTTTTGA TCTCCTGGAT 540 541 TCAGATGGTG GAGAAATACG TGTTACTTGC TTTAACGTGG TAGCCGACCA GTTCTATGAT 600 601 CAGATTGAAG TGGGGAAAGT GTACTTGATC TCCAAAGGAA GCTTGAAGCC TGCGCAGAAG 660 661 AGCTTTAATC ATCTGAACAA TGAATATGAA ATATTTTTAG AGGCTCAATC AGTGATCCAA 720 721 CCATGTTTAG AGGAAGATAA CACCATCCCA AAGCAACAGT TCAACTTTCG GCCGATAAAT 780 781 GAAATTGAAG GCTTGGAAAA CAATACCATG GTTGATGTTA TTGGCATCGT GGTGTCAATA 840 841 AATCCCTCGC TTTCGATAAT GAGAAAAAAT GGCACAGAAA CCAATAAACA AACTCTCCAA 900 901 TTAAAGGATA TGTCAGGTCG TATTGTGGAA ATGACTATGT GGGGTAAGTT CTGCAGCATA 960 961 GAGGGTCAGC AACTTCAACA TATGTGTGAC TCTGGTGTAT GTCCTGTATT GGCCATTAAA 1020 1021 ACTGGGAGAG TCAGTGATTT TAATGGGAAG TCAGTAACTA CTATTGGCTC AAGCCAACTA 1080 1081 TTTATAAATC CTGATTTTCC CGAGGCTCAC AGATTGAGAG ACTGGTATAA TAGAGAAGGG 1140 1141 AAGAGTATGA CTGCTGCTTC AATATCCAGG GAGACAACAA CCACGGGTAG GAATGATGTT 1200 1201 AGGAAGACAG TCTCACAGAT TAAGGATGAG GGTTTAGGAC GATCCGAGAA ACCTGACTGG 1260 1261 ATAACCGTAA AGGCAACCAT CACGTTCATA AAGGTTGACA ATTTCTGCTA TACAGCTTGT 1320 1321 CCATTGATGG TAGGGGATAG GCCATGCAAT AAGAAGGTTA ACAACAATGG TGATGGCACT 1380 1381 TGGCATTGTG ATCGTTGTGA TCAGAGTTTT CCTGAGTGTG ATTATAGGTA TCTGCTCCAG 1440 1441 TTTCAGATCC AGGATCATAC AGGTATGACC TGGGTTACAG CATTCCAAGA ATGTGGTGAG 1500 1501 GAGATATTGG GTGTCACTGC AAAGGAGCTG TACTTGTTGA AATATGAAGA ACAAGATGAT 1560 1561 TTAAAGTTTG CTGAAATTAT TCGGACAGTG CTCTTCCATC AATATTTATT CAAGTTGAAA 1620 1621 GTTAAGGAGG AGACATTTAG TGATGAACAG CGTGTGAAAT CAACTGTTGT CAAAGCTGAG 1680 1681 AAAATAAACC CATCGTCTGA GAGCAAGTAT CTTTTGGGTC TGATTGAGAA GCTTTCGAGT 1740 1741 GAAGATCCCA GTGCATCTAA AGGAACGTAT GGAACTTCTG CCTCAACTTC TGGAATGGCT 1800 1801 AATATTACCT ATGGTACTGG TGAATCTAAC TTTGGCAATA TCCATTCTGG CCAGTCCGTA 1860 1861 GGTGGTGGAT TCTCAAGTAC TGGTTCCAAC ATTTGTTTCA AATGCCAACA GCCTGGGCAC 1920 1921 TGGGCTAGTG AATGCCCTGG GATGGGTGCT GCCGGATCAG CATATGGGGA TGGTGGTTCA 1980 1981 TCAGGAAGAT ACACCAACAC CAGGCAACAT GTTGGTGGTT TCTAA 2025 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nucleus | |
Molecular Function | DNA binding | |
Molecular Function | Zinc ion binding | |
Biological Process | DNA recombination | |
Biological Process | DNA repair | |
Biological Process | DNA replication |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Cus-1067 | Cucumis sativus | 70.78 | 0.0 | 768 |
| LLPS-Sol-1754 | Solanum lycopersicum | 69.96 | 0.0 | 736 |
| LLPS-Amt-1759 | Amborella trichopoda | 69.04 | 0.0 | 805 |
| LLPS-Sot-0830 | Solanum tuberosum | 67.58 | 0.0 | 735 |
| LLPS-Pot-0363 | Populus trichocarpa | 67.25 | 0.0 | 687 |
| LLPS-Mae-2184 | Manihot esculenta | 66.91 | 0.0 | 785 |
| LLPS-Viv-1323 | Vitis vinifera | 66.79 | 0.0 | 770 |
| LLPS-Nia-1951 | Nicotiana attenuata | 64.13 | 0.0 | 748 |
| LLPS-Org-0575 | Oryza glaberrima | 62.92 | 0.0 | 624 |
| LLPS-Prp-0739 | Prunus persica | 62.52 | 0.0 | 718 |
| LLPS-Phv-1011 | Phaseolus vulgaris | 59.84 | 0.0 | 735 |
| LLPS-Hea-1594 | Helianthus annuus | 59.45 | 0.0 | 707 |
| LLPS-Gor-1320 | Gossypium raimondii | 59.39 | 0.0 | 727 |
| LLPS-Thc-0010 | Theobroma cacao | 59.35 | 0.0 | 710 |
| LLPS-Hov-2002 | Hordeum vulgare | 59.13 | 0.0 | 599 |
| LLPS-Php-0546 | Physcomitrella patens | 59.03 | 0.0 | 679 |
| LLPS-Coc-0265 | Corchorus capsularis | 58.65 | 0.0 | 706 |
| LLPS-Vir-0947 | Vigna radiata | 58.52 | 0.0 | 727 |
| LLPS-Arl-0924 | Arabidopsis lyrata | 58.04 | 0.0 | 716 |
| LLPS-Via-0324 | Vigna angularis | 57.46 | 0.0 | 725 |
| LLPS-Brn-3420 | Brassica napus | 57.23 | 0.0 | 699 |
| LLPS-Brr-0539 | Brassica rapa | 57.02 | 0.0 | 679 |
| LLPS-Bro-0936 | Brassica oleracea | 56.87 | 0.0 | 702 |
| LLPS-Glm-1725 | Glycine max | 56.59 | 0.0 | 702 |
| LLPS-Art-2667 | Arabidopsis thaliana | 56.09 | 0.0 | 718 |
| LLPS-Met-0240 | Medicago truncatula | 55.33 | 0.0 | 689 |
| LLPS-Tra-1124 | Triticum aestivum | 55.13 | 0.0 | 654 |
| LLPS-Orp-0129 | Oryza punctata | 54.96 | 0.0 | 642 |
| LLPS-Orm-1141 | Oryza meridionalis | 54.94 | 0.0 | 637 |
| LLPS-Sob-1229 | Sorghum bicolor | 54.58 | 0.0 | 620 |
| LLPS-Orni-0152 | Oryza nivara | 54.55 | 0.0 | 638 |
| LLPS-Orgl-0012 | Oryza glumaepatula | 54.4 | 0.0 | 635 |
| LLPS-Ori-0108 | Oryza indica | 54.38 | 0.0 | 636 |
| LLPS-Ors-0337 | Oryza sativa | 54.38 | 0.0 | 637 |
| LLPS-Orr-0507 | Oryza rufipogon | 54.38 | 0.0 | 637 |
| LLPS-Orbr-0768 | Oryza brachyantha | 54.21 | 0.0 | 635 |
| LLPS-Lep-0367 | Leersia perrieri | 53.5 | 0.0 | 623 |
| LLPS-Tru-0307 | Triticum urartu | 52.8 | 0.0 | 605 |
| LLPS-Sem-0369 | Selaginella moellendorffii | 51.48 | 0.0 | 630 |
| LLPS-Brd-0627 | Brachypodium distachyon | 50.63 | 0.0 | 613 |
| LLPS-Sei-0671 | Setaria italica | 50.53 | 0.0 | 635 |
| LLPS-Zem-1599 | Zea mays | 50.44 | 0.0 | 577 |
| LLPS-Chr-1159 | Chlamydomonas reinhardtii | 44.59 | 9e-124 | 397 |
| LLPS-Orn-0158 | Oreochromis niloticus | 40.62 | 3e-110 | 353 |
| LLPS-Asm-1079 | Astyanax mexicanus | 40.59 | 1e-112 | 358 |
| LLPS-Ten-1736 | Tetraodon nigroviridis | 40.56 | 4e-113 | 360 |
| LLPS-Icp-1761 | Ictalurus punctatus | 40.22 | 2e-108 | 348 |
| LLPS-Orl-0857 | Oryzias latipes | 40.17 | 3e-109 | 351 |
| LLPS-Tar-1295 | Takifugu rubripes | 40.04 | 3e-110 | 352 |
| LLPS-Scm-1636 | Scophthalmus maximus | 39.96 | 5e-106 | 343 |
| LLPS-Gaa-3531 | Gasterosteus aculeatus | 39.73 | 6e-110 | 351 |
| LLPS-Maf-0483 | Macaca fascicularis | 39.69 | 2e-86 | 287 |
| LLPS-Pof-0060 | Poecilia formosa | 39.64 | 3e-108 | 347 |
| LLPS-Anp-0087 | Anas platyrhynchos | 39.48 | 8e-50 | 189 |
| LLPS-Xim-0841 | Xiphophorus maculatus | 39.06 | 1e-110 | 353 |
| LLPS-Sah-0553 | Sarcophilus harrisii | 39.01 | 4e-103 | 334 |
| LLPS-Ova-0601 | Ovis aries | 38.8 | 1e-104 | 338 |
| LLPS-Fuv-1140 | Fusarium verticillioides | 38.41 | 8e-95 | 310 |
| LLPS-Fuo-0495 | Fusarium oxysporum | 38.36 | 1e-93 | 307 |
| LLPS-Loa-0590 | Loxodonta africana | 38.29 | 3e-105 | 340 |
| LLPS-Scf-1687 | Scleropages formosus | 38.26 | 5e-110 | 353 |
| LLPS-Paa-0243 | Papio anubis | 38.22 | 4e-107 | 345 |
| LLPS-Mam-0979 | Macaca mulatta | 38.22 | 2e-107 | 345 |
| LLPS-Leo-1707 | Lepisosteus oculatus | 38.16 | 9e-110 | 351 |
| LLPS-Dar-1129 | Danio rerio | 38.1 | 7e-115 | 364 |
| LLPS-Fus-0597 | Fusarium solani | 38.08 | 5e-95 | 313 |
| LLPS-Spr-0542 | Sporisorium reilianum | 38.07 | 8e-96 | 315 |
| LLPS-Man-3192 | Macaca nemestrina | 38.02 | 1e-104 | 338 |
| LLPS-Mum-0649 | Mus musculus | 37.93 | 3e-103 | 335 |
| LLPS-Mod-2017 | Monodelphis domestica | 37.89 | 5e-100 | 326 |
| LLPS-Mea-2410 | Mesocricetus auratus | 37.88 | 6e-105 | 338 |
| LLPS-Orb-0134 | Oryza barthii | 37.82 | 2e-94 | 311 |
| LLPS-Caf-1061 | Canis familiaris | 37.81 | 1e-100 | 327 |
| LLPS-Mal-1377 | Mandrillus leucophaeus | 37.73 | 2e-98 | 321 |
| LLPS-Map-0347 | Magnaporthe poae | 37.64 | 5e-86 | 289 |
| LLPS-Cea-3759 | Cercocebus atys | 37.5 | 6e-52 | 186 |
| LLPS-Lac-0499 | Latimeria chalumnae | 37.47 | 2e-100 | 323 |
| LLPS-Trr-0291 | Trichoderma reesei | 37.31 | 2e-100 | 326 |
| LLPS-Beb-0304 | Beauveria bassiana | 37.2 | 2e-93 | 308 |
| LLPS-Sus-1256 | Sus scrofa | 37.14 | 1e-103 | 335 |
| LLPS-Scj-0876 | Schizosaccharomyces japonicus | 37.14 | 3e-95 | 313 |
| LLPS-Orc-3239 | Oryctolagus cuniculus | 37.07 | 7e-99 | 324 |
| LLPS-Urm-0968 | Ursus maritimus | 37.06 | 2e-99 | 324 |
| LLPS-Aon-0319 | Aotus nancymaae | 37.02 | 6e-109 | 349 |
| LLPS-Xet-0535 | Xenopus tropicalis | 36.95 | 3e-100 | 327 |
| LLPS-Sac-0155 | Saccharomyces cerevisiae | 36.77 | 2e-97 | 319 |
| LLPS-Myl-3156 | Myotis lucifugus | 36.71 | 2e-108 | 348 |
| LLPS-Ict-0468 | Ictidomys tridecemlineatus | 36.71 | 2e-93 | 308 |
| LLPS-Aim-0113 | Ailuropoda melanoleuca | 36.59 | 2e-97 | 319 |
| LLPS-Miv-0787 | Microbotryum violaceum | 36.54 | 6e-91 | 302 |
| LLPS-Pes-1573 | Pelodiscus sinensis | 36.44 | 4e-104 | 336 |
| LLPS-Meg-2212 | Meleagris gallopavo | 36.4 | 3e-100 | 326 |
| LLPS-Ran-0924 | Rattus norvegicus | 36.39 | 2e-54 | 203 |
| LLPS-Caj-0447 | Callithrix jacchus | 36.32 | 3e-106 | 343 |
| LLPS-Trv-0330 | Trichoderma virens | 35.96 | 1e-104 | 337 |
| LLPS-Pug-0164 | Puccinia graminis | 35.88 | 4e-87 | 292 |
| LLPS-Ora-1071 | Ornithorhynchus anatinus | 35.78 | 3e-98 | 321 |
| LLPS-Asg-0858 | Ashbya gossypii | 35.57 | 5e-90 | 301 |
| LLPS-Cog-0191 | Colletotrichum gloeosporioides | 35.34 | 7e-98 | 320 |
| LLPS-Scs-0400 | Sclerotinia sclerotiorum | 35.18 | 2e-87 | 292 |
| LLPS-Bot-0263 | Bos taurus | 35.12 | 1e-106 | 343 |
| LLPS-Eqc-0026 | Equus caballus | 35.04 | 4e-103 | 334 |
| LLPS-Crn-0057 | Cryptococcus neoformans | 34.95 | 2e-102 | 332 |
| LLPS-Scp-1351 | Schizosaccharomyces pombe | 34.95 | 2e-92 | 305 |
| LLPS-Tum-0581 | Tuber melanosporum | 34.93 | 3e-94 | 310 |
| LLPS-Asfu-0132 | Aspergillus fumigatus | 34.93 | 5e-91 | 300 |
| LLPS-Dio-0054 | Dipodomys ordii | 34.88 | 1e-105 | 340 |
| LLPS-Asn-0287 | Aspergillus nidulans | 34.84 | 6e-93 | 306 |
| LLPS-Gaga-0016 | Gallus gallus | 34.77 | 2e-101 | 329 |
| LLPS-Dac-1369 | Daucus carota | 34.76 | 3e-90 | 295 |
| LLPS-Tag-0806 | Taeniopygia guttata | 34.73 | 5e-102 | 331 |
| LLPS-Gog-0016 | Gorilla gorilla | 34.7 | 2e-107 | 345 |
| LLPS-Ast-1115 | Aspergillus terreus | 34.67 | 3e-93 | 307 |
| LLPS-Fia-0204 | Ficedula albicollis | 34.62 | 3e-100 | 327 |
| LLPS-Cogr-0836 | Colletotrichum graminicola | 34.57 | 4e-100 | 326 |
| LLPS-Tut-1019 | Tursiops truncatus | 34.56 | 3e-101 | 329 |
| LLPS-Coo-0303 | Colletotrichum orbiculare | 34.55 | 1e-95 | 314 |
| LLPS-Cii-0323 | Ciona intestinalis | 34.45 | 2e-100 | 327 |
| LLPS-Cap-0034 | Cavia porcellus | 34.39 | 5e-104 | 336 |
| LLPS-Kop-0355 | Komagataella pastoris | 34.37 | 6e-91 | 302 |
| LLPS-Fec-2495 | Felis catus | 34.35 | 2e-103 | 335 |
| LLPS-Ved-1377 | Verticillium dahliae | 34.27 | 2e-91 | 303 |
| LLPS-Rhb-3846 | Rhinopithecus bieti | 34.24 | 5e-108 | 347 |
| LLPS-Pat-1154 | Pan troglodytes | 34.24 | 8e-108 | 346 |
| LLPS-Pap-0418 | Pan paniscus | 34.24 | 8e-108 | 346 |
| LLPS-Hos-3885 | Homo sapiens | 34.24 | 3e-108 | 348 |
| LLPS-Cas-0226 | Carlito syrichta | 34.19 | 4e-102 | 331 |
| LLPS-Gas-0495 | Galdieria sulphuraria | 34.14 | 9e-76 | 262 |
| LLPS-Aso-0183 | Aspergillus oryzae | 34.14 | 2e-91 | 303 |
| LLPS-Fud-1093 | Fukomys damarensis | 34.08 | 5e-101 | 328 |
| LLPS-Anc-1670 | Anolis carolinensis | 34.08 | 3e-88 | 294 |
| LLPS-Nol-2708 | Nomascus leucogenys | 34.03 | 2e-108 | 348 |
| LLPS-Nec-0225 | Neurospora crassa | 33.99 | 3e-96 | 316 |
| LLPS-Usm-0421 | Ustilago maydis | 33.96 | 2e-97 | 319 |
| LLPS-Mup-0934 | Mustela putorius furo | 33.92 | 3e-100 | 327 |
| LLPS-Dos-1028 | Dothistroma septosporum | 33.65 | 7e-99 | 323 |
| LLPS-Put-0400 | Puccinia triticina | 33.62 | 1e-78 | 269 |
| LLPS-Gag-0155 | Gaeumannomyces graminis | 33.59 | 1e-92 | 307 |
| LLPS-Asc-0381 | Aspergillus clavatus | 33.5 | 4e-90 | 299 |
| LLPS-Yal-0248 | Yarrowia lipolytica | 33.49 | 2e-77 | 265 |
| LLPS-Blg-0094 | Blumeria graminis | 33.45 | 4e-89 | 297 |
| LLPS-Asf-0202 | Aspergillus flavus | 33.42 | 2e-62 | 218 |
| LLPS-Nef-0725 | Neosartorya fischeri | 33.33 | 4e-93 | 307 |
| LLPS-Abg-0399 | Absidia glauca | 33.27 | 4e-80 | 273 |
| LLPS-Drm-0278 | Drosophila melanogaster | 33.23 | 5e-94 | 310 |
| LLPS-Scc-0168 | Schizosaccharomyces cryophilus | 33.22 | 2e-89 | 298 |
| LLPS-Cym-0542 | Cyanidioschyzon merolae | 32.72 | 2e-73 | 256 |
| LLPS-Asni-0427 | Aspergillus niger | 32.63 | 6e-89 | 296 |
| LLPS-Osl-1070 | Ostreococcus lucimarinus | 32.59 | 2e-63 | 226 |
| LLPS-Mao-0186 | Magnaporthe oryzae | 32.58 | 8e-92 | 304 |
| LLPS-Mel-0017 | Melampsora laricipopulina | 32.55 | 8e-87 | 288 |
| LLPS-Zyt-0166 | Zymoseptoria tritici | 32.38 | 2e-92 | 306 |
| LLPS-Phn-0638 | Phaeosphaeria nodorum | 31.99 | 1e-84 | 284 |
| LLPS-Chs-0622 | Chlorocebus sabaeus | 31.95 | 5e-78 | 266 |
| LLPS-Pyt-0998 | Pyrenophora teres | 31.1 | 7e-81 | 274 |
| LLPS-Cae-0062 | Caenorhabditis elegans | 30.2 | 9e-52 | 195 |
| LLPS-Lem-0311 | Leptosphaeria maculans | 30.0 | 2e-79 | 271 |
| LLPS-Chc-0201 | Chondrus crispus | 29.19 | 1e-62 | 226 |