• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Ors-0337
RPA1A

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Replication protein A 70 kDa DNA-binding subunit A
Gene Name: RPA1A, RPA70A, Os02g0776800, LOC_Os02g53680, OJ1534_E09.2, OsJ_08582, OSJNBb0013K01.36
Ensembl Gene: Os02g0776800
Ensembl Protein: Os02t0776800-01
Organism: Oryza sativa
Taxa ID: 39947
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Chromatin, Nucleolus, OthersPredicted from orthologs(View)

▼ FUNCTION


Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Plays an essential role in meiotic and somatic DNA repair, but is dispensable for DNA replication and homologous recombination. Is essential for normal progression through meiosis in pollen mother cells. Is involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.

▼ SEQUENCE


Protein Sequence (FASTA)
1     MAMARLTPNG  VAAALAGDTN  LKPVLQIVEL  RGVQVNGAGV  TRGERFRAVV  SDGTAASSAL  60
61    FAAQLSDHAR  SGALRRGSIV  QLSEYVINEV  GPRRIIVILN  LEVLVSECEI  IGNPTALSET  120
121   GSPIPNPTRV  EQFNGAPQYG  LMAGNSSNTT  TKPSDNVPLF  QNSMAGNSSN  FATRPSDKVP  180
181   VFQPTVQPSY  RPAPNYKNHG  AIMKNEAPAR  IIPISALNPY  QGRWAIKARV  TAKGDIRRYH  240
241   NAKGDGKVFS  FDLLDSDGGE  IRVTCFNALL  DRFYEVVEVG  KVYVVSRGNL  RPAQKNYNHL  300
301   NNEWEILLEN  GSTVDLCPDE  NSSIPTQRFD  FRPINEIEDA  QNNAILDIIG  VVTSVNPCTT  360
361   IQRKNGMETQ  KRTMNLKDMS  GRSVEVTMWG  DFCNREGSQL  QGMVERGIFP  VLAVKAGKVS  420
421   DFSGKSVGTI  SSTQLFINPD  SAEAHSLRQW  FDSGGRDAST  QSISRDITPG  ASRNEIRKTV  480
481   AQIKDEGLGM  GDKPDWITVK  ATVIFFKNES  FFYTACPNMI  GDRQCNKKVT  KSTNGNWTCD  540
541   KCDREFEECD  YRYLLQFQIQ  DHSGTAWVTA  FQEAGQELLG  CSATELNALK  EREDPRFADT  600
601   MLNCLFQEYL  LRLKVKEESY  GDERKVKNTA  VKVEKVDPSG  ESKFLLDLIS  KSSALH  656
Nucleotide CDS Sequence (FASTA)
1     ATGGCGATGG  CGAGGCTGAC  GCCGAACGGC  GTGGCGGCGG  CGCTGGCGGG  GGACACGAAC  60
61    CTGAAGCCGG  TGCTGCAGAT  CGTCGAGCTG  CGGGGCGTCC  AGGTCAACGG  CGCGGGCGTC  120
121   ACGCGCGGGG  AGAGGTTCCG  GGCGGTGGTC  TCCGACGGCA  CCGCCGCGTC  CTCCGCGCTC  180
181   TTCGCCGCGC  AGCTCAGCGA  CCACGCCCGA  TCCGGCGCCC  TCCGACGCGG  CAGCATTGTG  240
241   CAGCTCAGCG  AGTACGTCAT  CAACGAAGTC  GGCCCCAGAA  GGATTATTGT  CATTCTGAAC  300
301   CTGGAAGTTC  TTGTTTCGGA  GTGTGAGATA  ATTGGGAATC  CTACAGCGCT  TTCAGAAACT  360
361   GGATCTCCTA  TCCCAAATCC  GACAAGAGTA  GAGCAATTTA  ACGGAGCACC  TCAATATGGT  420
421   TTGATGGCAG  GGAACTCATC  AAATACAACC  ACAAAGCCTA  GTGACAATGT  TCCATTGTTC  480
481   CAAAATTCGA  TGGCAGGAAA  CTCCTCTAAC  TTTGCCACTA  GGCCCAGTGA  CAAAGTTCCG  540
541   GTCTTCCAAC  CAACAGTCCA  GCCATCTTAT  CGCCCTGCAC  CTAATTACAA  AAACCATGGA  600
601   GCAATCATGA  AAAATGAAGC  CCCTGCTAGA  ATAATCCCCA  TATCTGCTTT  AAATCCTTAT  660
661   CAAGGCCGCT  GGGCTATCAA  GGCTAGAGTT  ACTGCCAAGG  GAGATATCCG  CCGATACCAT  720
721   AATGCTAAAG  GTGATGGGAA  AGTATTCTCT  TTTGACTTGC  TTGATTCTGA  TGGGGGAGAG  780
781   ATACGGGTGA  CATGCTTCAA  TGCTCTTCTT  GATCGATTCT  ATGAAGTTGT  GGAAGTTGGT  840
841   AAGGTCTATG  TGGTATCAAG  AGGAAACTTG  AGACCTGCAC  AGAAGAACTA  TAACCATCTT  900
901   AACAATGAGT  GGGAGATTTT  ATTGGAGAAT  GGATCAACTG  TGGATCTTTG  TCCTGATGAG  960
961   AACAGTTCCA  TTCCCACCCA  GCGGTTTGAC  TTCAGACCGA  TCAATGAAAT  TGAGGATGCC  1020
1021  CAGAACAATG  CTATCCTTGA  CATCATAGGT  GTTGTTACAT  CGGTCAATCC  TTGCACCACA  1080
1081  ATACAGAGGA  AAAATGGCAT  GGAAACTCAG  AAAAGAACTA  TGAACCTGAA  GGATATGTCT  1140
1141  GGTCGAAGTG  TTGAGGTAAC  CATGTGGGGT  GACTTTTGCA  ACAGAGAAGG  CTCACAGCTT  1200
1201  CAAGGAATGG  TTGAACGTGG  GATCTTTCCT  GTGCTGGCTG  TCAAAGCAGG  AAAAGTGAGT  1260
1261  GATTTCAGTG  GCAAGTCTGT  CGGCACAATT  TCTTCAACTC  AGCTCTTCAT  CAACCCTGAT  1320
1321  TCTGCTGAAG  CTCATAGTCT  CAGGCAATGG  TTTGATAGTG  GAGGAAGAGA  TGCTTCTACT  1380
1381  CAGTCCATAT  CCAGAGATAT  CACGCCTGGA  GCATCAAGGA  ATGAGATCCG  AAAGACAGTA  1440
1441  GCACAGATCA  AGGATGAAGG  TCTTGGAATG  GGGGACAAAC  CTGACTGGAT  TACGGTGAAA  1500
1501  GCCACCGTTA  TATTCTTCAA  GAATGAGTCC  TTCTTCTACA  CAGCTTGCCC  TAACATGATT  1560
1561  GGCGACAGGC  AGTGCAATAA  GAAGGTGACA  AAGAGTACTA  ATGGCAATTG  GACCTGTGAC  1620
1621  AAATGCGATA  GGGAGTTTGA  AGAGTGCGAC  TACAGGTATC  TCCTGCAGTT  TCAGATTCAA  1680
1681  GATCACTCGG  GAACAGCTTG  GGTGACAGCA  TTCCAGGAGG  CTGGGCAGGA  GTTGCTTGGC  1740
1741  TGCTCGGCAA  CAGAGCTCAA  CGCACTTAAG  GAGCGCGAGG  ACCCTCGGTT  TGCAGACACC  1800
1801  ATGCTCAATT  GCTTGTTTCA  GGAATATCTG  CTCAGGCTGA  AGGTCAAAGA  AGAATCATAC  1860
1861  GGCGATGAGC  GCAAAGTGAA  GAACACCGCG  GTCAAAGTGG  AGAAGGTTGA  TCCTTCGGGT  1920
1921  GAAAGTAAAT  TTCTGCTGGA  TTTGATCTCC  AAGTCCTCGG  CGCTACATTA  G  1971

▼ KEYWORD


ID
Family
Complete proteome
DNA damage
DNA recombination
DNA repair
DNA replication
DNA-binding
Metal-binding
Nucleus
Reference proteome
Zinc
Zinc-finger

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
DNA replication factor A complex
Cellular Component
Nuclear chromatin
Cellular Component
Nuclear chromosome, telomeric region
Molecular Function
Damaged DNA binding
Molecular Function
Metal ion binding
Molecular Function
Sequence-specific DNA binding
Molecular Function
Single-stranded DNA binding
Molecular Function
Single-stranded telomeric DNA binding
Biological Process
Chiasma assembly
Biological Process
DNA repair
Biological Process
DNA unwinding involved in DNA replication
Biological Process
DNA-dependent DNA replication
Biological Process
Double-strand break repair via homologous recombination
Biological Process
Male meiosis I
Biological Process
Male meiotic nuclear division
Biological Process
Meiotic cell cycle
Biological Process
Nucleotide-excision repair
Biological Process
Pollen development
Biological Process
Telomere maintenance
Biological Process
Telomere maintenance via telomerase

▼ KEGG



▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Orr-0507Oryza rufipogon100.00.01308
LLPS-Orni-0152Oryza nivara99.540.01304
LLPS-Org-0575Oryza glaberrima99.470.01139
LLPS-Orgl-0012Oryza glumaepatula99.390.01293
LLPS-Ori-0108Oryza indica99.390.01302
LLPS-Orm-1141Oryza meridionalis99.090.01290
LLPS-Orp-0129Oryza punctata96.480.01261
LLPS-Orbr-0768Oryza brachyantha90.180.01179
LLPS-Lep-0367Leersia perrieri88.840.01169
LLPS-Sei-0671Setaria italica74.960.0 983
LLPS-Tru-0307Triticum urartu74.70.0 897
LLPS-Sob-0913Sorghum bicolor74.160.0 975
LLPS-Zem-0194Zea mays73.70.0 967
LLPS-Tra-2682Triticum aestivum73.390.0 966
LLPS-Hov-1219Hordeum vulgare73.320.0 970
LLPS-Brd-0627Brachypodium distachyon72.260.0 931
LLPS-Viv-0054Vitis vinifera60.650.0 786
LLPS-Sol-0330Solanum lycopersicum60.120.0 785
LLPS-Nia-1582Nicotiana attenuata59.660.0 783
LLPS-Brn-3420Brassica napus59.630.0 768
LLPS-Arl-2024Arabidopsis lyrata59.510.0 768
LLPS-Bro-0936Brassica oleracea59.180.0 768
LLPS-Gor-1320Gossypium raimondii59.170.0 781
LLPS-Hea-1965Helianthus annuus59.070.0 764
LLPS-Thc-0010Theobroma cacao58.710.0 749
LLPS-Art-0079Arabidopsis thaliana58.680.0 770
LLPS-Cus-0490Cucumis sativus58.590.0 761
LLPS-Mae-0180Manihot esculenta58.380.0 766
LLPS-Prp-0002Prunus persica58.310.0 758
LLPS-Coc-0265Corchorus capsularis58.280.0 734
LLPS-Mua-1271Musa acuminata58.150.0 724
LLPS-Via-0127Vigna angularis58.020.0 742
LLPS-Phv-1120Phaseolus vulgaris57.870.0 730
LLPS-Glm-1196Glycine max57.720.0 731
LLPS-Met-0240Medicago truncatula57.410.0 723
LLPS-Vir-1567Vigna radiata56.330.0 702
LLPS-Pot-0363Populus trichocarpa56.190.0 739
LLPS-Amt-0003Amborella trichopoda54.130.0 654
LLPS-Php-0546Physcomitrella patens48.930.0 630
LLPS-Sot-0830Solanum tuberosum48.380.0 600
LLPS-Sem-0369Selaginella moellendorffii48.230.0 610
LLPS-Brr-2944Brassica rapa44.130.0 578
LLPS-Chr-1159Chlamydomonas reinhardtii41.912e-107 353
LLPS-Cea-3759Cercocebus atys39.111e-51 184
LLPS-Ran-0924Rattus norvegicus37.741e-31 135
LLPS-Anp-0087Anas platyrhynchos37.385e-30 130
LLPS-Lac-0499Latimeria chalumnae37.051e-86 286
LLPS-Cym-0542Cyanidioschyzon merolae36.512e-1068.2
LLPS-Tag-0806Taeniopygia guttata35.667e-104 335
LLPS-Scj-0876Schizosaccharomyces japonicus35.651e-89 298
LLPS-Fia-0204Ficedula albicollis35.553e-105 339
LLPS-Pes-1573Pelodiscus sinensis35.131e-111 355
LLPS-Meg-2212Meleagris gallopavo35.021e-104 337
LLPS-Gaa-3531Gasterosteus aculeatus34.941e-108 348
LLPS-Dac-1369Daucus carota34.731e-84 280
LLPS-Xim-0841Xiphophorus maculatus34.674e-109 349
LLPS-Gaga-0016Gallus gallus34.554e-105 338
LLPS-Orn-0158Oreochromis niloticus34.451e-108 348
LLPS-Orl-0608Oryzias latipes34.43e-105 338
LLPS-Ten-1736Tetraodon nigroviridis34.397e-106 341
LLPS-Mea-2410Mesocricetus auratus34.331e-107 345
LLPS-Spr-0542Sporisorium reilianum34.268e-108 346
LLPS-Asm-1079Astyanax mexicanus34.14e-104 335
LLPS-Scf-1687Scleropages formosus34.091e-104 338
LLPS-Fud-1093Fukomys damarensis34.062e-103 334
LLPS-Sus-1256Sus scrofa33.92e-106 342
LLPS-Loa-0590Loxodonta africana33.787e-101 328
LLPS-Maf-0483Macaca fascicularis33.762e-83 278
LLPS-Leo-1707Lepisosteus oculatus33.744e-105 338
LLPS-Crn-0057Cryptococcus neoformans33.71e-96 317
LLPS-Dar-1129Danio rerio33.693e-107 344
LLPS-Icp-1761Ictalurus punctatus33.645e-104 335
LLPS-Mam-0979Macaca mulatta33.642e-105 339
LLPS-Dio-0054Dipodomys ordii33.595e-107 344
LLPS-Cap-0034Cavia porcellus33.595e-105 338
LLPS-Man-3192Macaca nemestrina33.557e-97 316
LLPS-Sah-0553Sarcophilus harrisii33.549e-105 338
LLPS-Eqc-0026Equus caballus33.546e-102 330
LLPS-Usm-0421Ustilago maydis33.547e-107 343
LLPS-Paa-0243Papio anubis33.496e-105 338
LLPS-Bot-0263Bos taurus33.485e-108 346
LLPS-Xet-0535Xenopus tropicalis33.484e-106 341
LLPS-Tar-1295Takifugu rubripes33.441e-102 332
LLPS-Aon-0319Aotus nancymaae33.385e-107 343
LLPS-Ora-1071Ornithorhynchus anatinus33.387e-100 325
LLPS-Tut-1019Tursiops truncatus33.332e-99 323
LLPS-Map-0347Magnaporthe poae33.333e-72 251
LLPS-Cii-0323Ciona intestinalis33.333e-98 320
LLPS-Pof-0060Poecilia formosa33.331e-100 326
LLPS-Caj-0447Callithrix jacchus33.284e-103 334
LLPS-Myl-3156Myotis lucifugus33.238e-104 335
LLPS-Ova-0601Ovis aries33.181e-105 340
LLPS-Nol-2708Nomascus leucogenys33.189e-109 348
LLPS-Cas-0226Carlito syrichta33.183e-103 334
LLPS-Aim-0113Ailuropoda melanoleuca33.128e-98 320
LLPS-Pap-0418Pan paniscus33.085e-106 341
LLPS-Hos-3885Homo sapiens33.081e-106 343
LLPS-Osl-1070Ostreococcus lucimarinus33.041e-62 224
LLPS-Ict-0468Ictidomys tridecemlineatus32.975e-86 288
LLPS-Pat-1154Pan troglodytes32.932e-105 340
LLPS-Mod-2017Monodelphis domestica32.939e-105 338
LLPS-Mup-0934Mustela putorius furo32.876e-100 325
LLPS-Caf-1061Canis familiaris32.872e-101 329
LLPS-Urm-0968Ursus maritimus32.874e-99 323
LLPS-Fec-2495Felis catus32.833e-104 336
LLPS-Asg-0858Ashbya gossypii32.823e-71 250
LLPS-Mum-0649Mus musculus32.724e-98 321
LLPS-Tum-0581Tuber melanosporum32.74e-100 325
LLPS-Rhb-3846Rhinopithecus bieti32.681e-104 337
LLPS-Mal-1377Mandrillus leucophaeus32.673e-89 296
LLPS-Trv-0330Trichoderma virens32.662e-95 313
LLPS-Fuv-1140Fusarium verticillioides32.651e-86 288
LLPS-Orc-3239Oryctolagus cuniculus32.651e-98 323
LLPS-Mao-0186Magnaporthe oryzae32.64e-90 299
LLPS-Drm-0278Drosophila melanogaster32.571e-89 297
LLPS-Gog-0016Gorilla gorilla32.483e-105 338
LLPS-Fuo-0495Fusarium oxysporum32.481e-85 285
LLPS-Scm-1636Scophthalmus maximus32.42e-102 333
LLPS-Anc-1670Anolis carolinensis32.36e-86 288
LLPS-Trr-0291Trichoderma reesei32.291e-94 310
LLPS-Beb-0304Beauveria bassiana32.299e-91 300
LLPS-Fus-0597Fusarium solani32.032e-91 303
LLPS-Pug-0164Puccinia graminis31.83e-90 300
LLPS-Blg-0094Blumeria graminis31.721e-85 287
LLPS-Pyt-0998Pyrenophora teres31.611e-77 265
LLPS-Gag-0155Gaeumannomyces graminis31.65e-86 288
LLPS-Scs-0400Sclerotinia sclerotiorum31.568e-78 266
LLPS-Asc-0381Aspergillus clavatus31.559e-82 276
LLPS-Mel-0017Melampsora laricipopulina31.524e-84 280
LLPS-Gas-0495Galdieria sulphuraria31.51e-93 309
LLPS-Dos-1028Dothistroma septosporum31.474e-92 305
LLPS-Zyt-0166Zymoseptoria tritici31.425e-91 302
LLPS-Lem-0311Leptosphaeria maculans31.352e-85 286
LLPS-Ved-1377Verticillium dahliae31.312e-85 287
LLPS-Scc-0168Schizosaccharomyces cryophilus31.242e-94 310
LLPS-Phn-0638Phaeosphaeria nodorum31.232e-84 283
LLPS-Cog-0191Colletotrichum gloeosporioides31.182e-88 294
LLPS-Ast-1115Aspergillus terreus31.093e-83 280
LLPS-Cogr-0836Colletotrichum graminicola30.966e-90 298
LLPS-Sac-0155Saccharomyces cerevisiae30.939e-82 277
LLPS-Coo-0303Colletotrichum orbiculare30.877e-88 293
LLPS-Kop-0355Komagataella pastoris30.792e-89 298
LLPS-Nec-0225Neurospora crassa30.783e-90 300
LLPS-Asn-0287Aspergillus nidulans30.754e-87 291
LLPS-Asni-0427Aspergillus niger30.623e-82 278
LLPS-Aso-0183Aspergillus oryzae30.552e-85 286
LLPS-Asf-0202Aspergillus flavus30.543e-54 196
LLPS-Asfu-0132Aspergillus fumigatus30.482e-77 263
LLPS-Put-0400Puccinia triticina30.481e-77 266
LLPS-Nef-0725Neosartorya fischeri30.412e-81 276
LLPS-Miv-0787Microbotryum violaceum30.315e-81 275
LLPS-Orb-0134Oryza barthii29.581e-82 280
LLPS-Chc-0201Chondrus crispus29.441e-71 250
LLPS-Scp-1351Schizosaccharomyces pombe29.23e-94 310
LLPS-Yal-0248Yarrowia lipolytica29.142e-63 226
LLPS-Chs-0622Chlorocebus sabaeus29.119e-73 251
LLPS-Abg-0399Absidia glauca28.384e-77 264
LLPS-Cae-0062Caenorhabditis elegans26.092e-44 172