LLPS-Prp-0002
PRUPE_7G202500
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Replication protein A subunit |
| Gene Name: | PRUPE_7G202500, PRUPE_ppa002611mg |
| Ensembl Gene: | PRUPE_7G202500 |
| Ensembl Protein: | ONH97636 |
| Organism: | Prunus persica |
| Taxa ID: | 3760 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nucleolus, Others | Predicted from orthologs | (View) |
▼ FUNCTION
| Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ONH97636 | ONH97636 |
| UniProt | M5W1M6, M5W1M6_PRUPE | |
| GeneBank | KB639097, CM007657 | EMJ03133.1, ONH97636.1 |
| RefSeq | XM_007201872.1 | XP_007201934.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPVQLTPNAI AAISAGDLNS KPLVQVIDIK LLGTQERYRF IVSDAVSCQH AMVATQLNDR 60 61 IKTSQVKKGS IIQLTDYISN YFQNHKIIVV LNMETIILDS EIIGDPKPYV ESGSTAQKAL 120 121 PNNNFEHSVR DSNNHMISQE SVRNVQSLRP TSHSGTSLNR GPNLRPTFHS ENSVHNVPNF 180 181 RPTVQPPYQP PPQYKNHGSI VKNEAPARII PINALNPYQG RWAIKARVTA KGDPRRYNNA 240 241 RGDGKVFSFD LLDSEGGEIR VTCFNAVLDR FYDTIEVGRV YLISKGSLKP AQKNFNHLKN 300 301 DWEITLDASS TVELCPDEDG SIPEQKFSFR HISEIENVDS NSIVDIIGIV ISVNPSVPIM 360 361 RKNGMETQRR IVNLRDWSGK SVELTLWGDV CNREGQRLED MLASGLFPVL AVKAGKINDF 420 421 SGKSVGTIHS TQLFINPDIP DSHSLREWFD QGGKDTASVS ISKDIVPGGS KNEIRKTVSQ 480 481 IKDEGLGRSD KPDWVTVKAT ISFIKTDSFC YTACPLMIGD RQCNKKVSRS GNRGWQCDRC 540 541 DQEFEECDYR YLLQAQIQDN TGLTWATAFQ ESGEEILGCS AKDLYLLKEQ DDARFGDIVR 600 601 SSIFNQFLFK LKIKEETYGD EQKVKITVVK ADKVNYSSES KYMLDMILKF SR 652 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCGGTGC AACTGACGCC GAACGCGATC GCGGCGATCT CAGCCGGCGA CTTGAACTCG 60 61 AAGCCATTGG TGCAGGTAAT CGATATTAAG CTCCTCGGCA CGCAGGAGAG GTACCGTTTC 120 121 ATAGTCTCCG ATGCCGTTTC GTGTCAGCAC GCCATGGTCG CTACGCAGCT CAACGACCGA 180 181 ATCAAGACCA GCCAAGTCAA GAAAGGTTCC ATCATCCAGC TCACCGATTA CATTTCCAAC 240 241 TACTTCCAGA ACCACAAGAT TATTGTAGTG CTGAACATGG AAACTATCAT ACTGGACTCT 300 301 GAGATTATTG GGGATCCAAA ACCATATGTT GAATCTGGTT CAACTGCTCA AAAGGCATTG 360 361 CCTAATAACA ATTTTGAGCA CTCAGTCAGG GATAGCAATA ACCATATGAT TTCTCAAGAA 420 421 TCTGTACGCA ATGTGCAGAG TCTCAGACCT ACTTCTCATT CAGGGACCTC TCTTAACCGT 480 481 GGCCCGAATC TCAGACCTAC TTTTCATTCT GAAAACTCTG TTCACAATGT GCCAAATTTC 540 541 CGACCTACTG TCCAACCTCC TTACCAGCCA CCTCCACAGT ACAAAAATCA TGGTTCAATC 600 601 GTAAAGAACG AGGCACCGGC ACGGATCATT CCTATTAATG CTCTGAATCC TTATCAGGGA 660 661 AGGTGGGCTA TCAAGGCAAG GGTCACAGCA AAAGGGGATC CCCGTCGGTA TAATAATGCT 720 721 CGAGGAGATG GTAAGGTTTT CTCTTTCGAT CTCCTTGACT CTGAAGGAGG GGAAATACGA 780 781 GTGACCTGCT TCAATGCTGT TCTTGACCGC TTCTACGATA CTATTGAGGT TGGTAGAGTT 840 841 TACTTGATTT CAAAGGGTAG CTTGAAACCT GCCCAGAAGA ATTTCAACCA TCTGAAAAAC 900 901 GACTGGGAGA TAACGTTGGA TGCAAGTTCA ACTGTGGAGC TCTGCCCTGA TGAAGATGGT 960 961 TCTATACCAG AGCAGAAGTT TTCCTTCAGG CATATTAGTG AAATTGAGAA TGTTGATAGT 1020 1021 AATTCTATCG TTGACATTAT TGGTATTGTG ATATCTGTCA ACCCTTCTGT CCCTATTATG 1080 1081 AGGAAGAATG GTATGGAAAC TCAGAGAAGA ATTGTGAATC TAAGGGATTG GTCAGGCAAG 1140 1141 AGCGTTGAGC TAACCCTTTG GGGAGATGTC TGCAACAGGG AAGGTCAAAG GCTTGAAGAT 1200 1201 ATGTTGGCTT CTGGGTTATT TCCAGTTTTA GCTGTCAAAG CTGGGAAGAT TAATGATTTT 1260 1261 AGTGGGAAGT CCGTAGGAAC AATTCATTCT ACACAGCTGT TCATAAACCC AGATATCCCT 1320 1321 GACTCTCATA GCTTGAGAGA GTGGTTTGAT CAAGGGGGCA AGGATACTGC GTCTGTGTCG 1380 1381 ATTTCAAAAG ACATTGTTCC AGGAGGAAGT AAGAATGAGA TACGCAAAAC TGTTTCTCAG 1440 1441 ATCAAGGATG AAGGTCTTGG AAGATCAGAT AAGCCGGATT GGGTCACTGT GAAGGCCACG 1500 1501 ATATCTTTCA TTAAAACAGA TTCTTTCTGT TACACAGCTT GCCCATTGAT GATTGGAGAT 1560 1561 AGGCAGTGTA ACAAAAAAGT GTCAAGGTCA GGAAACAGAG GATGGCAGTG TGACAGGTGC 1620 1621 GATCAAGAAT TTGAGGAGTG TGATTATAGA TATCTGCTTC AAGCCCAAAT TCAAGACAAT 1680 1681 ACTGGTTTGA CCTGGGCAAC AGCTTTCCAG GAATCTGGGG AAGAGATCTT GGGTTGCTCA 1740 1741 GCAAAGGACT TGTACTTGTT GAAAGAGCAG GATGATGCAA GATTTGGAGA CATAGTTCGG 1800 1801 AGCAGTATAT TTAACCAATT CCTTTTCAAG CTTAAAATCA AAGAGGAGAC GTACGGTGAC 1860 1861 GAGCAGAAGG TGAAGATCAC GGTCGTTAAG GCAGATAAGG TGAACTATTC TTCAGAGAGC 1920 1921 AAGTACATGC TTGACATGAT TTTGAAGTTT TCTAGGTAA 1959 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nucleus | |
Molecular Function | DNA binding | |
Molecular Function | Metal ion binding | |
Biological Process | DNA recombination | |
Biological Process | DNA repair | |
Biological Process | DNA replication | |
Biological Process | Male meiotic nuclear division | |
Biological Process | Pollen development |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Vir-1567 | Vigna radiata | 78.78 | 0.0 | 759 |
| LLPS-Viv-0054 | Vitis vinifera | 73.77 | 0.0 | 944 |
| LLPS-Thc-0010 | Theobroma cacao | 71.63 | 0.0 | 909 |
| LLPS-Coc-0265 | Corchorus capsularis | 71.47 | 0.0 | 898 |
| LLPS-Cus-0490 | Cucumis sativus | 71.15 | 0.0 | 932 |
| LLPS-Mae-0180 | Manihot esculenta | 70.85 | 0.0 | 929 |
| LLPS-Pot-0363 | Populus trichocarpa | 70.06 | 0.0 | 915 |
| LLPS-Gor-1320 | Gossypium raimondii | 69.68 | 0.0 | 917 |
| LLPS-Glm-1196 | Glycine max | 69.14 | 0.0 | 882 |
| LLPS-Via-0127 | Vigna angularis | 68.94 | 0.0 | 893 |
| LLPS-Met-0240 | Medicago truncatula | 68.29 | 0.0 | 884 |
| LLPS-Phv-1120 | Phaseolus vulgaris | 68.13 | 0.0 | 875 |
| LLPS-Sol-0330 | Solanum lycopersicum | 67.58 | 0.0 | 883 |
| LLPS-Art-0079 | Arabidopsis thaliana | 67.17 | 0.0 | 869 |
| LLPS-Arl-2024 | Arabidopsis lyrata | 67.02 | 0.0 | 866 |
| LLPS-Nia-1582 | Nicotiana attenuata | 66.41 | 0.0 | 863 |
| LLPS-Brn-3420 | Brassica napus | 65.18 | 0.0 | 853 |
| LLPS-Hea-1965 | Helianthus annuus | 64.71 | 0.0 | 844 |
| LLPS-Bro-0936 | Brassica oleracea | 64.63 | 0.0 | 852 |
| LLPS-Org-0575 | Oryza glaberrima | 62.04 | 0.0 | 681 |
| LLPS-Php-0546 | Physcomitrella patens | 59.96 | 0.0 | 565 |
| LLPS-Amt-0003 | Amborella trichopoda | 59.54 | 0.0 | 736 |
| LLPS-Mua-1271 | Musa acuminata | 59.51 | 0.0 | 735 |
| LLPS-Orgl-0012 | Oryza glumaepatula | 58.36 | 0.0 | 747 |
| LLPS-Orr-0507 | Oryza rufipogon | 58.31 | 0.0 | 748 |
| LLPS-Ors-0337 | Oryza sativa | 58.31 | 0.0 | 748 |
| LLPS-Orni-0152 | Oryza nivara | 58.31 | 0.0 | 747 |
| LLPS-Ori-0108 | Oryza indica | 58.31 | 0.0 | 748 |
| LLPS-Orm-1141 | Oryza meridionalis | 57.85 | 0.0 | 746 |
| LLPS-Orp-0129 | Oryza punctata | 57.66 | 0.0 | 751 |
| LLPS-Orbr-0768 | Oryza brachyantha | 57.38 | 0.0 | 736 |
| LLPS-Sob-0913 | Sorghum bicolor | 56.11 | 0.0 | 716 |
| LLPS-Zem-0194 | Zea mays | 56.04 | 0.0 | 714 |
| LLPS-Lep-0367 | Leersia perrieri | 55.21 | 0.0 | 723 |
| LLPS-Sei-0671 | Setaria italica | 55.17 | 0.0 | 746 |
| LLPS-Brd-0627 | Brachypodium distachyon | 54.53 | 0.0 | 685 |
| LLPS-Tru-0307 | Triticum urartu | 54.39 | 0.0 | 641 |
| LLPS-Tra-2578 | Triticum aestivum | 53.91 | 3e-162 | 499 |
| LLPS-Hov-0072 | Hordeum vulgare | 53.83 | 1e-163 | 506 |
| LLPS-Sem-0369 | Selaginella moellendorffii | 50.99 | 0.0 | 648 |
| LLPS-Sot-0830 | Solanum tuberosum | 50.64 | 0.0 | 656 |
| LLPS-Brr-2944 | Brassica rapa | 46.02 | 0.0 | 610 |
| LLPS-Chr-1159 | Chlamydomonas reinhardtii | 41.77 | 1e-105 | 348 |
| LLPS-Gog-0016 | Gorilla gorilla | 40.55 | 2e-94 | 309 |
| LLPS-Mal-1377 | Mandrillus leucophaeus | 39.02 | 2e-84 | 283 |
| LLPS-Cea-3759 | Cercocebus atys | 38.96 | 1e-48 | 176 |
| LLPS-Drm-0278 | Drosophila melanogaster | 37.73 | 6e-83 | 280 |
| LLPS-Orb-0134 | Oryza barthii | 37.55 | 1e-84 | 285 |
| LLPS-Dac-1369 | Daucus carota | 36.64 | 3e-85 | 281 |
| LLPS-Aso-0183 | Aspergillus oryzae | 36.36 | 7e-77 | 263 |
| LLPS-Anc-1670 | Anolis carolinensis | 36.3 | 2e-74 | 257 |
| LLPS-Ran-0924 | Rattus norvegicus | 36.02 | 4e-28 | 124 |
| LLPS-Nol-2708 | Nomascus leucogenys | 36.0 | 1e-110 | 353 |
| LLPS-Fus-0597 | Fusarium solani | 35.7 | 3e-80 | 273 |
| LLPS-Pap-0418 | Pan paniscus | 35.69 | 3e-107 | 344 |
| LLPS-Hos-3885 | Homo sapiens | 35.69 | 3e-108 | 347 |
| LLPS-Lac-0499 | Latimeria chalumnae | 35.62 | 9e-81 | 271 |
| LLPS-Pat-1154 | Pan troglodytes | 35.54 | 3e-107 | 344 |
| LLPS-Bot-0263 | Bos taurus | 35.33 | 3e-106 | 341 |
| LLPS-Sac-0155 | Saccharomyces cerevisiae | 35.27 | 3e-84 | 283 |
| LLPS-Gag-0155 | Gaeumannomyces graminis | 35.27 | 6e-78 | 267 |
| LLPS-Fud-1093 | Fukomys damarensis | 35.23 | 5e-105 | 338 |
| LLPS-Fia-0204 | Ficedula albicollis | 35.2 | 5e-102 | 330 |
| LLPS-Fec-2495 | Felis catus | 35.05 | 1e-106 | 343 |
| LLPS-Tag-0806 | Taeniopygia guttata | 35.0 | 3e-103 | 333 |
| LLPS-Cas-0226 | Carlito syrichta | 34.95 | 6e-105 | 338 |
| LLPS-Aon-0319 | Aotus nancymaae | 34.94 | 2e-106 | 342 |
| LLPS-Caf-1061 | Canis familiaris | 34.9 | 2e-103 | 334 |
| LLPS-Fuv-1140 | Fusarium verticillioides | 34.88 | 3e-80 | 271 |
| LLPS-Pes-1573 | Pelodiscus sinensis | 34.82 | 4e-103 | 333 |
| LLPS-Cap-0034 | Cavia porcellus | 34.8 | 5e-109 | 349 |
| LLPS-Mup-0934 | Mustela putorius furo | 34.74 | 2e-103 | 334 |
| LLPS-Dio-0054 | Dipodomys ordii | 34.74 | 2e-109 | 350 |
| LLPS-Mea-2410 | Mesocricetus auratus | 34.74 | 2e-105 | 339 |
| LLPS-Loa-0590 | Loxodonta africana | 34.64 | 9e-102 | 330 |
| LLPS-Rhb-3846 | Rhinopithecus bieti | 34.63 | 1e-106 | 342 |
| LLPS-Aim-0113 | Ailuropoda melanoleuca | 34.61 | 3e-101 | 328 |
| LLPS-Urm-0968 | Ursus maritimus | 34.59 | 5e-101 | 328 |
| LLPS-Ten-1736 | Tetraodon nigroviridis | 34.5 | 3e-109 | 349 |
| LLPS-Mam-0979 | Macaca mulatta | 34.35 | 3e-104 | 336 |
| LLPS-Orc-3239 | Oryctolagus cuniculus | 34.35 | 1e-101 | 330 |
| LLPS-Gaa-3531 | Gasterosteus aculeatus | 34.35 | 1e-106 | 342 |
| LLPS-Paa-0243 | Papio anubis | 34.34 | 2e-104 | 337 |
| LLPS-Meg-2212 | Meleagris gallopavo | 34.31 | 5e-100 | 325 |
| LLPS-Asg-0858 | Ashbya gossypii | 34.3 | 4e-77 | 266 |
| LLPS-Gaga-0016 | Gallus gallus | 34.24 | 5e-102 | 330 |
| LLPS-Eqc-0026 | Equus caballus | 34.19 | 6e-100 | 325 |
| LLPS-Tut-1019 | Tursiops truncatus | 34.19 | 3e-103 | 333 |
| LLPS-Maf-0483 | Macaca fascicularis | 34.17 | 9e-83 | 276 |
| LLPS-Asm-1079 | Astyanax mexicanus | 34.09 | 9e-109 | 348 |
| LLPS-Myl-3156 | Myotis lucifugus | 34.07 | 2e-105 | 339 |
| LLPS-Caj-0447 | Callithrix jacchus | 34.01 | 7e-103 | 333 |
| LLPS-Pof-0060 | Poecilia formosa | 34.0 | 4e-100 | 325 |
| LLPS-Icp-1761 | Ictalurus punctatus | 33.99 | 1e-110 | 353 |
| LLPS-Orn-0158 | Oreochromis niloticus | 33.94 | 3e-108 | 347 |
| LLPS-Sah-0553 | Sarcophilus harrisii | 33.9 | 4e-103 | 333 |
| LLPS-Mod-2017 | Monodelphis domestica | 33.89 | 3e-105 | 339 |
| LLPS-Asf-0202 | Aspergillus flavus | 33.85 | 2e-55 | 199 |
| LLPS-Xim-0841 | Xiphophorus maculatus | 33.85 | 7e-104 | 335 |
| LLPS-Anp-0087 | Anas platyrhynchos | 33.81 | 1e-26 | 119 |
| LLPS-Put-0400 | Puccinia triticina | 33.79 | 5e-75 | 259 |
| LLPS-Xet-0535 | Xenopus tropicalis | 33.74 | 1e-102 | 332 |
| LLPS-Ora-1071 | Ornithorhynchus anatinus | 33.69 | 6e-97 | 317 |
| LLPS-Orl-0608 | Oryzias latipes | 33.59 | 1e-101 | 329 |
| LLPS-Scs-0400 | Sclerotinia sclerotiorum | 33.56 | 3e-69 | 243 |
| LLPS-Dar-1129 | Danio rerio | 33.54 | 6e-114 | 361 |
| LLPS-Ova-0601 | Ovis aries | 33.54 | 1e-102 | 332 |
| LLPS-Ict-0468 | Ictidomys tridecemlineatus | 33.49 | 1e-88 | 295 |
| LLPS-Tar-1295 | Takifugu rubripes | 33.49 | 3e-105 | 338 |
| LLPS-Man-3192 | Macaca nemestrina | 33.38 | 6e-97 | 317 |
| LLPS-Scf-1687 | Scleropages formosus | 33.38 | 4e-107 | 345 |
| LLPS-Sus-1256 | Sus scrofa | 33.38 | 9e-103 | 332 |
| LLPS-Map-0347 | Magnaporthe poae | 33.33 | 2e-72 | 252 |
| LLPS-Mum-0649 | Mus musculus | 32.78 | 2e-95 | 314 |
| LLPS-Leo-1707 | Lepisosteus oculatus | 32.73 | 2e-105 | 339 |
| LLPS-Spr-0542 | Sporisorium reilianum | 32.72 | 2e-99 | 324 |
| LLPS-Scj-0876 | Schizosaccharomyces japonicus | 32.63 | 2e-07 | 58.5 |
| LLPS-Crn-0057 | Cryptococcus neoformans | 32.33 | 5e-98 | 320 |
| LLPS-Trr-0291 | Trichoderma reesei | 32.29 | 5e-96 | 314 |
| LLPS-Gas-0495 | Galdieria sulphuraria | 32.28 | 2e-92 | 306 |
| LLPS-Trv-0330 | Trichoderma virens | 32.24 | 2e-93 | 307 |
| LLPS-Dos-1028 | Dothistroma septosporum | 31.82 | 1e-89 | 298 |
| LLPS-Cii-0323 | Ciona intestinalis | 31.76 | 2e-102 | 332 |
| LLPS-Yal-0248 | Yarrowia lipolytica | 31.74 | 3e-65 | 231 |
| LLPS-Pug-0164 | Puccinia graminis | 31.63 | 7e-85 | 285 |
| LLPS-Osl-1070 | Ostreococcus lucimarinus | 31.61 | 4e-67 | 236 |
| LLPS-Chs-0622 | Chlorocebus sabaeus | 31.23 | 2e-76 | 261 |
| LLPS-Usm-0421 | Ustilago maydis | 31.07 | 4e-99 | 323 |
| LLPS-Cym-0542 | Cyanidioschyzon merolae | 30.98 | 3e-78 | 268 |
| LLPS-Fuo-0495 | Fusarium oxysporum | 30.97 | 1e-82 | 277 |
| LLPS-Tum-0581 | Tuber melanosporum | 30.92 | 9e-90 | 298 |
| LLPS-Scm-1636 | Scophthalmus maximus | 30.75 | 3e-95 | 314 |
| LLPS-Coo-0303 | Colletotrichum orbiculare | 30.69 | 2e-88 | 294 |
| LLPS-Zyt-0166 | Zymoseptoria tritici | 30.41 | 5e-92 | 305 |
| LLPS-Mao-0186 | Magnaporthe oryzae | 30.38 | 3e-88 | 294 |
| LLPS-Ved-1377 | Verticillium dahliae | 30.22 | 2e-84 | 284 |
| LLPS-Beb-0304 | Beauveria bassiana | 30.22 | 6e-89 | 295 |
| LLPS-Kop-0355 | Komagataella pastoris | 30.11 | 3e-82 | 278 |
| LLPS-Asn-0287 | Aspergillus nidulans | 30.11 | 8e-86 | 287 |
| LLPS-Asni-0427 | Aspergillus niger | 30.09 | 1e-83 | 281 |
| LLPS-Cog-0191 | Colletotrichum gloeosporioides | 30.06 | 3e-85 | 286 |
| LLPS-Nef-0725 | Neosartorya fischeri | 30.0 | 1e-81 | 276 |
| LLPS-Scc-0168 | Schizosaccharomyces cryophilus | 29.97 | 2e-88 | 295 |
| LLPS-Pyt-0998 | Pyrenophora teres | 29.88 | 2e-75 | 259 |
| LLPS-Ast-1115 | Aspergillus terreus | 29.81 | 3e-74 | 256 |
| LLPS-Miv-0787 | Microbotryum violaceum | 29.8 | 1e-93 | 308 |
| LLPS-Cogr-0836 | Colletotrichum graminicola | 29.6 | 3e-87 | 291 |
| LLPS-Asfu-0132 | Aspergillus fumigatus | 29.53 | 6e-70 | 243 |
| LLPS-Blg-0094 | Blumeria graminis | 29.26 | 2e-78 | 268 |
| LLPS-Asc-0381 | Aspergillus clavatus | 29.11 | 3e-79 | 270 |
| LLPS-Abg-0399 | Absidia glauca | 29.09 | 3e-77 | 265 |
| LLPS-Lem-0311 | Leptosphaeria maculans | 29.06 | 2e-75 | 259 |
| LLPS-Chc-0201 | Chondrus crispus | 28.91 | 5e-73 | 254 |
| LLPS-Scp-1351 | Schizosaccharomyces pombe | 28.81 | 2e-87 | 292 |
| LLPS-Nec-0225 | Neurospora crassa | 28.73 | 3e-86 | 288 |
| LLPS-Phn-0638 | Phaeosphaeria nodorum | 28.59 | 1e-74 | 256 |
| LLPS-Cae-0062 | Caenorhabditis elegans | 28.57 | 3e-43 | 169 |
| LLPS-Mel-0017 | Melampsora laricipopulina | 27.87 | 1e-74 | 255 |