DrLLPS - Data resource of LLPS

LLPS-Caj-1959
LSM5

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	U6 snRNA-associated Sm-like protein LSm5
Gene Name:	LSM5
Ensembl Gene:	ENSCJAG00000047379.1
Ensembl Protein:	ENSCJAP00000056628.1
Organism:	Callithrix jacchus
Taxa ID:	9483
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
P-body	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Saccharomyces cerevisiae	LLPS-Sac-0285	P40089	Client	P-body	51.22	4e-19	82.0

▼ FUNCTION

Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ENSCJAT00000079295.1	ENSCJAP00000056628.1
Ensembl	ENSCJAT00000017786.2	ENSCJAP00000016823.2
UniProt		A0A2R8MZY3, A0A2R8MZY3_CALJA

▼ SEQUENCE

Protein Sequence (FASTA)
1 MVKCPVGRKY FPDLACRGKI ARERDPRGLL DRTLGLRLVE SVRAAEKAEA RFSKSSHRLR 60 61 TQATSGVAMA ANATTNPSQL LPLELVDKCI GSRIHIVMKS DKEIVGTLLG FDDFVNMVLE 120 121 DVTEFEITPE GRRITKLDQI LLNGNNITML VPGGEGPEV 159
Nucleotide CDS Sequence (FASTA)
1 ATGGCGGCTA ACGCTACTAC CAACCCGTCG CAGCTGCTGC CGTTAGAGCT TGTGGACAAA 60 61 TGTATTGGAT CAAGAATTCA CATTGTTATG AAGAGTGATA AGGAAATTGT TGGCACTCTT 120 121 CTAGGATTTG ATGACTTTGT CAGTATCCTT TTAAAAGTGA AATTACACCG GAAGGAAGAA 180 181 GGATTACTAA ATTAG 195

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0507	mRNA processing
KW-0508	mRNA splicing
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0687	Ribonucleoprotein
KW-0694	RNA-binding
KW-0747	Spliceosome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005681	Cellular Component	Spliceosomal complex
GO:0003723	Molecular Function	RNA binding
GO:0006397	Biological Process	MRNA processing
GO:0008380	Biological Process	RNA splicing

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Nol-1059	Nomascus leucogenys	100.0	2e-59	186
LLPS-Ict-2066	Ictidomys tridecemlineatus	100.0	2e-59	186
LLPS-Cas-1382	Carlito syrichta	100.0	2e-59	186
LLPS-Cap-2955	Cavia porcellus	100.0	2e-59	186
LLPS-Orc-1433	Oryctolagus cuniculus	100.0	2e-59	186
LLPS-Fia-2712	Ficedula albicollis	100.0	3e-47	155
LLPS-Rhb-2768	Rhinopithecus bieti	100.0	2e-59	186
LLPS-Otg-2650	Otolemur garnettii	100.0	2e-59	186
LLPS-Pes-1665	Pelodiscus sinensis	100.0	4e-46	152
LLPS-Man-0158	Macaca nemestrina	100.0	2e-59	186
LLPS-Loa-3155	Loxodonta africana	100.0	2e-59	186
LLPS-Anp-0652	Anas platyrhynchos	100.0	4e-46	152
LLPS-Hos-1835	Homo sapiens	100.0	2e-59	186
LLPS-Urm-0890	Ursus maritimus	100.0	9e-59	186
LLPS-Pap-2526	Pan paniscus	100.0	2e-59	186
LLPS-Pat-0895	Pan troglodytes	100.0	2e-59	186
LLPS-Fec-0702	Felis catus	100.0	2e-59	186
LLPS-Mal-1589	Mandrillus leucophaeus	100.0	2e-59	186
LLPS-Paa-1565	Papio anubis	100.0	2e-59	186
LLPS-Myl-2656	Myotis lucifugus	100.0	2e-59	186
LLPS-Ova-0909	Ovis aries	100.0	2e-59	186
LLPS-Aim-2592	Ailuropoda melanoleuca	100.0	2e-59	186
LLPS-Ran-0520	Rattus norvegicus	100.0	2e-59	186
LLPS-Dio-1888	Dipodomys ordii	100.0	2e-59	186
LLPS-Bot-1025	Bos taurus	100.0	2e-59	186
LLPS-Tut-0806	Tursiops truncatus	100.0	2e-59	186
LLPS-Fud-0218	Fukomys damarensis	100.0	2e-59	186
LLPS-Gog-1067	Gorilla gorilla	100.0	2e-59	186
LLPS-Cea-0657	Cercocebus atys	100.0	2e-59	186
LLPS-Mum-3948	Mus musculus	100.0	2e-59	186
LLPS-Maf-2662	Macaca fascicularis	100.0	2e-59	186
LLPS-Mea-1035	Mesocricetus auratus	100.0	2e-59	186
LLPS-Gaga-0143	Gallus gallus	98.9	5e-59	185
LLPS-Caf-3272	Canis familiaris	98.9	3e-58	183
LLPS-Meg-0190	Meleagris gallopavo	98.9	5e-59	185
LLPS-Aon-3380	Aotus nancymaae	98.9	8e-59	184
LLPS-Sus-0121	Sus scrofa	98.7	1e-47	156
LLPS-Tag-2207	Taeniopygia guttata	96.7	1e-57	181
LLPS-Mam-0114	Macaca mulatta	96.7	9e-58	182
LLPS-Poa-4486	Pongo abelii	96.7	1e-57	181
LLPS-Anc-2158	Anolis carolinensis	96.67	7e-34	120
LLPS-Lac-2117	Latimeria chalumnae	95.6	2e-57	181
LLPS-Gaa-0324	Gasterosteus aculeatus	95.6	5e-57	180
LLPS-Ten-1182	Tetraodon nigroviridis	95.4	1e-54	174
LLPS-Xet-1921	Xenopus tropicalis	95.12	4e-49	159
LLPS-Ere-0696	Erinaceus europaeus	94.74	8e-31	112
LLPS-Dar-0709	Danio rerio	94.51	7e-56	177
LLPS-Pof-0082	Poecilia formosa	94.51	2e-56	178
LLPS-Scf-3471	Scleropages formosus	94.51	3e-56	178
LLPS-Leo-1421	Lepisosteus oculatus	94.51	6e-56	177
LLPS-Icp-1580	Ictalurus punctatus	93.41	1e-55	176
LLPS-Cis-0832	Ciona savignyi	90.48	8e-50	161
LLPS-Cii-1238	Ciona intestinalis	88.76	4e-50	162
LLPS-Tar-1013	Takifugu rubripes	87.95	1e-43	147
LLPS-Orl-2666	Oryzias latipes	87.25	3e-57	183
LLPS-Mup-3550	Mustela putorius furo	87.07	6e-64	201
LLPS-Eqc-3453	Equus caballus	85.71	6e-47	154
LLPS-Xim-0733	Xiphophorus maculatus	84.62	3e-48	157
LLPS-Asm-1594	Astyanax mexicanus	81.91	8e-45	149
LLPS-Drm-1010	Drosophila melanogaster	81.4	5e-44	147
LLPS-Hea-1511	Helianthus annuus	81.01	1e-40	138
LLPS-Prp-0937	Prunus persica	80.0	1e-40	138
LLPS-Cus-0567	Cucumis sativus	80.0	3e-40	137
LLPS-Pot-0099	Populus trichocarpa	79.27	6e-41	139
LLPS-Org-1178	Oryza glaberrima	79.03	6e-27	102
LLPS-Viv-0837	Vitis vinifera	79.01	2e-40	137
LLPS-Coc-0518	Corchorus capsularis	78.75	2e-39	135
LLPS-Mae-1618	Manihot esculenta	78.75	2e-39	135
LLPS-Phv-2507	Phaseolus vulgaris	78.75	9e-40	135
LLPS-Gor-2142	Gossypium raimondii	78.75	2e-39	134
LLPS-Vir-0984	Vigna radiata	78.75	9e-40	135
LLPS-Met-0170	Medicago truncatula	78.75	2e-39	135
LLPS-Via-1005	Vigna angularis	78.75	9e-40	135
LLPS-Thc-0968	Theobroma cacao	78.75	2e-39	135
LLPS-Tru-1522	Triticum urartu	78.69	1e-26	101
LLPS-Mua-1049	Musa acuminata	77.78	1e-39	135
LLPS-Glm-0575	Glycine max	77.5	3e-39	134
LLPS-Sem-1325	Selaginella moellendorffii	77.11	1e-39	135
LLPS-Art-2427	Arabidopsis thaliana	76.25	1e-38	132
LLPS-Arl-1995	Arabidopsis lyrata	76.25	7e-39	133
LLPS-Abg-1384	Absidia glauca	76.25	3e-37	129
LLPS-Amt-0758	Amborella trichopoda	75.51	2e-19	82.4
LLPS-Sol-0254	Solanum lycopersicum	75.32	1e-32	129
LLPS-Trr-1271	Trichoderma reesei	75.0	2e-34	122
LLPS-Coo-0296	Colletotrichum orbiculare	75.0	5e-34	120
LLPS-Asn-1165	Aspergillus nidulans	75.0	5e-35	125
LLPS-Sot-0955	Solanum tuberosum	74.42	7e-41	138
LLPS-Fus-0306	Fusarium solani	74.07	1e-34	122
LLPS-Cogr-1131	Colletotrichum graminicola	73.75	6e-34	120
LLPS-Trv-1108	Trichoderma virens	73.75	8e-34	120
LLPS-Nec-0441	Neurospora crassa	73.75	3e-34	121
LLPS-Tum-0199	Tuber melanosporum	73.75	5e-34	121
LLPS-Cae-1122	Caenorhabditis elegans	73.63	2e-44	148
LLPS-Zem-0066	Zea mays	73.56	1e-40	138
LLPS-Orm-0856	Oryza meridionalis	73.56	1e-40	138
LLPS-Orr-0559	Oryza rufipogon	73.56	1e-40	138
LLPS-Sob-1690	Sorghum bicolor	73.56	1e-40	138
LLPS-Orbr-2170	Oryza brachyantha	73.56	1e-40	138
LLPS-Orp-1853	Oryza punctata	73.56	1e-40	138
LLPS-Ors-1347	Oryza sativa	73.56	1e-40	138
LLPS-Brd-1237	Brachypodium distachyon	73.56	1e-40	138
LLPS-Lep-1120	Leersia perrieri	73.56	1e-40	138
LLPS-Orgl-0233	Oryza glumaepatula	73.56	1e-40	138
LLPS-Orni-0528	Oryza nivara	73.56	1e-40	138
LLPS-Orb-1807	Oryza barthii	73.56	1e-40	138
LLPS-Ori-0964	Oryza indica	73.56	1e-40	138
LLPS-Bro-2383	Brassica oleracea	73.26	7e-39	133
LLPS-Brr-1725	Brassica rapa	73.26	7e-39	133
LLPS-Tra-1102	Triticum aestivum	73.26	3e-40	137
LLPS-Brn-1565	Brassica napus	73.26	7e-39	133
LLPS-Fuv-0096	Fusarium verticillioides	72.84	4e-34	121
LLPS-Asfu-1082	Aspergillus fumigatus	72.5	1e-33	120
LLPS-Asf-1355	Aspergillus flavus	72.5	5e-34	120
LLPS-Asc-1296	Aspergillus clavatus	72.5	3e-34	121
LLPS-Hov-0897	Hordeum vulgare	72.04	4e-40	138
LLPS-Nef-1335	Neosartorya fischeri	71.67	2e-20	85.1
LLPS-Ved-0622	Verticillium dahliae	71.25	9e-33	117
LLPS-Spr-1331	Sporisorium reilianum	71.25	1e-34	123
LLPS-Usm-0548	Ustilago maydis	71.25	7e-35	124
LLPS-Ast-0586	Aspergillus terreus	71.25	6e-33	118
LLPS-Gas-0063	Galdieria sulphuraria	70.51	1e-31	115
LLPS-Sei-1880	Setaria italica	70.41	6e-42	145
LLPS-Dos-0847	Dothistroma septosporum	70.13	6e-29	107
LLPS-Beb-1032	Beauveria bassiana	70.0	9e-32	115
LLPS-Scs-0835	Sclerotinia sclerotiorum	70.0	2e-31	114
LLPS-Gag-0908	Gaeumannomyces graminis	70.0	3e-32	116
LLPS-Osl-0398	Ostreococcus lucimarinus	69.57	2e-35	124
LLPS-Map-0932	Magnaporthe poae	69.51	1e-32	117
LLPS-Zyt-0225	Zymoseptoria tritici	68.83	1e-29	109
LLPS-Mao-1394	Magnaporthe oryzae	68.75	5e-32	115
LLPS-Asni-1218	Aspergillus niger	67.86	1e-17	77.4
LLPS-Blg-0349	Blumeria graminis	67.5	1e-31	115
LLPS-Miv-0016	Microbotryum violaceum	66.27	1e-29	110
LLPS-Pug-0677	Puccinia graminis	65.75	6e-29	109
LLPS-Dac-1866	Daucus carota	65.59	6e-35	124
LLPS-Php-0590	Physcomitrella patens	62.81	5e-43	147
LLPS-Lem-0416	Leptosphaeria maculans	61.73	1e-25	99.4
LLPS-Crn-0805	Cryptococcus neoformans	61.73	6e-30	110
LLPS-Ora-2255	Ornithorhynchus anatinus	61.33	3e-27	103
LLPS-Phn-0239	Phaeosphaeria nodorum	60.49	2e-24	96.7
LLPS-Scm-3458	Scophthalmus maximus	60.44	2e-25	98.2
LLPS-Yal-0424	Yarrowia lipolytica	59.3	3e-24	95.9
LLPS-Scj-0516	Schizosaccharomyces japonicus	59.21	5e-23	92.4
LLPS-Mod-3518	Monodelphis domestica	57.45	6e-21	87.4
LLPS-Scp-1037	Schizosaccharomyces pombe	56.96	4e-22	90.1
LLPS-Scc-0912	Schizosaccharomyces cryophilus	55.7	9e-22	89.4
LLPS-Pyt-0195	Pyrenophora teres	55.06	7e-22	89.7
LLPS-Kop-0427	Komagataella pastoris	52.7	1e-15	73.2
LLPS-Sac-0285	Saccharomyces cerevisiae	51.22	7e-19	82.0
LLPS-Pytr-1282	Pyrenophora triticirepentis	49.33	9e-11	59.7
LLPS-Asg-0446	Ashbya gossypii	48.1	1e-18	80.9
LLPS-Cym-0422	Cyanidioschyzon merolae	43.9	1e-16	76.3
LLPS-Nia-0082	Nicotiana attenuata	31.58	2e-06	49.7

LLPS-Caj-1959LSM5

Protein Sequence

Nucleotide Sequence

LLPS-Caj-1959
LSM5