DrLLPS - Data resource of LLPS

LLPS-Abg-1384
ABSGL_03865.1 scaffold 4679

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	U6 snRNA-associated Sm-like protein LSm5
Gene Name:	ABSGL_03865.1 scaffold 4679, LSM5
Ensembl Gene:	SAL98336
Ensembl Protein:	SAL98336
Organism:	Absidia glauca
Taxa ID:	4829
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
P-body	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Saccharomyces cerevisiae	LLPS-Sac-0285	P40089	Client	P-body	45.88	4e-19	80.1

▼ FUNCTION

Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	SAL98336	SAL98336
UniProt		A0A168MDE0, A0A168MDE0_ABSGL
GeneBank	LT552064	SAL98336.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MATSQLLPLE LIDKCIGSRI WVVMKSEKEF TGKLLGFDDF VNMVLEDVTE YENTQDGYKT 60 61 HKLDQILLNG NNICALIPGG TGPV 84

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0507	mRNA processing
KW-0508	mRNA splicing
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0687	Ribonucleoprotein
KW-0694	RNA-binding
KW-0747	Spliceosome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005681	Cellular Component	Spliceosomal complex
GO:0003723	Molecular Function	RNA binding
GO:0006397	Biological Process	MRNA processing
GO:0008380	Biological Process	RNA splicing

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Anc-2158	Anolis carolinensis	85.11	2e-21	85.5
LLPS-Xet-1921	Xenopus tropicalis	78.57	2e-32	114
LLPS-Dar-0709	Danio rerio	76.25	2e-37	127
LLPS-Meg-0190	Meleagris gallopavo	76.25	8e-38	128
LLPS-Hos-1835	Homo sapiens	76.25	8e-38	127
LLPS-Urm-0890	Ursus maritimus	76.25	3e-36	125
LLPS-Pap-2526	Pan paniscus	76.25	8e-38	127
LLPS-Pat-0895	Pan troglodytes	76.25	8e-38	127
LLPS-Pof-0082	Poecilia formosa	76.25	1e-37	127
LLPS-Fec-0702	Felis catus	76.25	8e-38	127
LLPS-Lac-2117	Latimeria chalumnae	76.25	2e-37	127
LLPS-Man-0158	Macaca nemestrina	76.25	8e-38	127
LLPS-Loa-3155	Loxodonta africana	76.25	8e-38	127
LLPS-Otg-2650	Otolemur garnettii	76.25	8e-38	127
LLPS-Orc-1433	Oryctolagus cuniculus	76.25	8e-38	127
LLPS-Rhb-2768	Rhinopithecus bieti	76.25	8e-38	127
LLPS-Ten-1182	Tetraodon nigroviridis	76.25	1e-37	127
LLPS-Caf-3272	Canis familiaris	76.25	8e-38	127
LLPS-Cap-2955	Cavia porcellus	76.25	8e-38	127
LLPS-Cas-1382	Carlito syrichta	76.25	8e-38	127
LLPS-Gaga-0143	Gallus gallus	76.25	8e-38	128
LLPS-Nol-1059	Nomascus leucogenys	76.25	8e-38	127
LLPS-Ict-2066	Ictidomys tridecemlineatus	76.25	8e-38	127
LLPS-Tag-2207	Taeniopygia guttata	76.25	7e-38	128
LLPS-Mum-3948	Mus musculus	76.25	8e-38	127
LLPS-Maf-2662	Macaca fascicularis	76.25	8e-38	127
LLPS-Cii-1238	Ciona intestinalis	76.25	3e-39	131
LLPS-Mea-1035	Mesocricetus auratus	76.25	8e-38	127
LLPS-Orl-2666	Oryzias latipes	76.25	8e-36	124
LLPS-Leo-1421	Lepisosteus oculatus	76.25	2e-37	127
LLPS-Cis-0832	Ciona savignyi	76.25	4e-39	131
LLPS-Cea-0657	Cercocebus atys	76.25	8e-38	127
LLPS-Aon-3380	Aotus nancymaae	76.25	7e-38	128
LLPS-Gog-1067	Gorilla gorilla	76.25	8e-38	127
LLPS-Fud-0218	Fukomys damarensis	76.25	8e-38	127
LLPS-Caj-1959	Callithrix jacchus	76.25	2e-37	129
LLPS-Icp-1580	Ictalurus punctatus	76.25	2e-37	127
LLPS-Tut-0806	Tursiops truncatus	76.25	8e-38	127
LLPS-Gaa-0324	Gasterosteus aculeatus	76.25	1e-37	127
LLPS-Dio-1888	Dipodomys ordii	76.25	8e-38	127
LLPS-Scf-3471	Scleropages formosus	76.25	2e-37	127
LLPS-Bot-1025	Bos taurus	76.25	8e-38	127
LLPS-Ran-0520	Rattus norvegicus	76.25	8e-38	127
LLPS-Mal-1589	Mandrillus leucophaeus	76.25	8e-38	127
LLPS-Paa-1565	Papio anubis	76.25	8e-38	127
LLPS-Myl-2656	Myotis lucifugus	76.25	8e-38	127
LLPS-Ova-0909	Ovis aries	76.25	8e-38	127
LLPS-Mup-3550	Mustela putorius furo	76.25	7e-36	126
LLPS-Aim-2592	Ailuropoda melanoleuca	76.25	8e-38	127
LLPS-Dos-0847	Dothistroma septosporum	75.64	2e-33	116
LLPS-Usm-0548	Ustilago maydis	74.68	1e-35	122
LLPS-Spr-1331	Sporisorium reilianum	74.68	2e-35	122
LLPS-Amt-0758	Amborella trichopoda	74.47	9e-18	75.5
LLPS-Gas-0063	Galdieria sulphuraria	74.36	1e-35	122
LLPS-Anp-0652	Anas platyrhynchos	74.32	5e-33	115
LLPS-Pes-1665	Pelodiscus sinensis	74.32	5e-33	115
LLPS-Fia-2712	Ficedula albicollis	74.32	1e-32	114
LLPS-Tum-0199	Tuber melanosporum	74.07	2e-36	124
LLPS-Gag-0908	Gaeumannomyces graminis	73.81	2e-34	119
LLPS-Mam-0114	Macaca mulatta	73.75	1e-36	125
LLPS-Sus-0121	Sus scrofa	73.33	4e-33	116
LLPS-Trr-1271	Trichoderma reesei	73.17	9e-36	122
LLPS-Sol-0254	Solanum lycopersicum	72.86	1e-27	111
LLPS-Coo-0296	Colletotrichum orbiculare	72.84	7e-35	120
LLPS-Blg-0349	Blumeria graminis	72.84	4e-34	118
LLPS-Drm-1010	Drosophila melanogaster	72.73	2e-35	122
LLPS-Ast-0586	Aspergillus terreus	72.62	2e-35	121
LLPS-Poa-4486	Pongo abelii	72.5	6e-36	123
LLPS-Pug-0677	Puccinia graminis	72.22	4e-32	114
LLPS-Trv-1108	Trichoderma virens	71.95	4e-35	120
LLPS-Asfu-1082	Aspergillus fumigatus	71.95	3e-35	121
LLPS-Cogr-1131	Colletotrichum graminicola	71.95	2e-35	121
LLPS-Asn-1165	Aspergillus nidulans	71.95	2e-35	122
LLPS-Sem-1325	Selaginella moellendorffii	71.79	1e-33	117
LLPS-Zyt-0225	Zymoseptoria tritici	71.79	9e-32	112
LLPS-Beb-1032	Beauveria bassiana	71.6	5e-35	120
LLPS-Fus-0306	Fusarium solani	71.6	1e-34	119
LLPS-Map-0932	Magnaporthe poae	71.43	2e-34	119
LLPS-Mao-1394	Magnaporthe oryzae	71.43	1e-33	117
LLPS-Ved-0622	Verticillium dahliae	70.73	3e-34	118
LLPS-Asc-1296	Aspergillus clavatus	70.73	2e-35	121
LLPS-Nec-0441	Neurospora crassa	70.73	5e-35	120
LLPS-Asf-1355	Aspergillus flavus	70.73	7e-35	120
LLPS-Tar-1013	Takifugu rubripes	70.67	1e-27	103
LLPS-Viv-0837	Vitis vinifera	70.51	1e-33	117
LLPS-Art-2427	Arabidopsis thaliana	70.51	4e-33	115
LLPS-Gor-2142	Gossypium raimondii	70.51	2e-33	116
LLPS-Pot-0099	Populus trichocarpa	70.51	2e-33	117
LLPS-Mae-1618	Manihot esculenta	70.51	2e-33	116
LLPS-Phv-1406	Phaseolus vulgaris	70.51	1e-33	117
LLPS-Coc-0518	Corchorus capsularis	70.51	2e-33	116
LLPS-Prp-0937	Prunus persica	70.51	2e-33	116
LLPS-Hea-1018	Helianthus annuus	70.51	9e-33	116
LLPS-Mua-1049	Musa acuminata	70.51	2e-33	116
LLPS-Thc-0968	Theobroma cacao	70.51	2e-33	116
LLPS-Via-1005	Vigna angularis	70.51	1e-33	117
LLPS-Met-0170	Medicago truncatula	70.51	2e-33	116
LLPS-Arl-1995	Arabidopsis lyrata	70.51	3e-33	116
LLPS-Vir-0984	Vigna radiata	70.51	1e-33	117
LLPS-Fuv-0096	Fusarium verticillioides	70.37	3e-34	118
LLPS-Ors-1347	Oryza sativa	70.0	2e-34	119
LLPS-Orp-1853	Oryza punctata	70.0	2e-34	119
LLPS-Sob-1690	Sorghum bicolor	70.0	2e-34	119
LLPS-Orbr-2170	Oryza brachyantha	70.0	2e-34	119
LLPS-Orr-0559	Oryza rufipogon	70.0	2e-34	119
LLPS-Orm-0856	Oryza meridionalis	70.0	2e-34	119
LLPS-Zem-0066	Zea mays	70.0	2e-34	119
LLPS-Orb-1807	Oryza barthii	70.0	2e-34	119
LLPS-Ori-0964	Oryza indica	70.0	2e-34	119
LLPS-Orni-0528	Oryza nivara	70.0	2e-34	119
LLPS-Orgl-0233	Oryza glumaepatula	70.0	2e-34	119
LLPS-Lep-1120	Leersia perrieri	70.0	2e-34	119
LLPS-Sot-0955	Solanum tuberosum	70.0	2e-34	119
LLPS-Hov-0897	Hordeum vulgare	70.0	6e-34	119
LLPS-Sei-1880	Setaria italica	70.0	1e-33	120
LLPS-Tra-1102	Triticum aestivum	70.0	2e-34	119
LLPS-Brd-1237	Brachypodium distachyon	70.0	2e-34	119
LLPS-Cus-0567	Cucumis sativus	69.88	7e-34	117
LLPS-Scm-3458	Scophthalmus maximus	69.77	4e-13	63.5
LLPS-Scs-0835	Sclerotinia sclerotiorum	69.51	1e-32	114
LLPS-Brr-1725	Brassica rapa	69.23	1e-31	112
LLPS-Bro-2383	Brassica oleracea	69.23	1e-31	112
LLPS-Glm-0575	Glycine max	69.23	4e-33	115
LLPS-Brn-1565	Brassica napus	69.23	1e-31	112
LLPS-Cae-1122	Caenorhabditis elegans	68.54	5e-36	123
LLPS-Php-0590	Physcomitrella patens	67.5	2e-31	114
LLPS-Nef-1335	Neosartorya fischeri	67.21	7e-20	81.3
LLPS-Org-1178	Oryza glaberrima	66.67	8e-21	83.6
LLPS-Tru-1522	Triticum urartu	66.67	8e-21	83.6
LLPS-Ere-0696	Erinaceus europaeus	66.67	1e-19	80.5
LLPS-Scj-0516	Schizosaccharomyces japonicus	66.67	2e-28	103
LLPS-Xim-0733	Xiphophorus maculatus	66.25	3e-30	108
LLPS-Phn-0239	Phaeosphaeria nodorum	65.85	5e-31	110
LLPS-Lem-0416	Leptosphaeria maculans	65.85	4e-31	110
LLPS-Crn-0805	Cryptococcus neoformans	65.43	4e-32	113
LLPS-Miv-0016	Microbotryum violaceum	65.06	3e-31	110
LLPS-Osl-0398	Ostreococcus lucimarinus	64.2	3e-30	108
LLPS-Scp-1037	Schizosaccharomyces pombe	64.0	9e-28	102
LLPS-Asm-1594	Astyanax mexicanus	63.86	7e-27	100
LLPS-Asni-1218	Aspergillus niger	63.79	3e-17	74.3
LLPS-Eqc-3453	Equus caballus	63.75	5e-28	102
LLPS-Yal-0424	Yarrowia lipolytica	63.64	1e-25	96.7
LLPS-Scc-0912	Schizosaccharomyces cryophilus	61.33	7e-26	97.1
LLPS-Dac-1866	Daucus carota	60.44	8e-30	107
LLPS-Pyt-0195	Pyrenophora teres	57.78	3e-27	100
LLPS-Ora-2255	Ornithorhynchus anatinus	56.76	5e-26	97.4
LLPS-Asg-0446	Ashbya gossypii	53.16	3e-24	92.8
LLPS-Pytr-1282	Pyrenophora triticirepentis	52.86	1e-13	65.5
LLPS-Sac-0285	Saccharomyces cerevisiae	45.88	4e-19	80.1
LLPS-Kop-0427	Komagataella pastoris	44.59	2e-14	67.4
LLPS-Cym-0422	Cyanidioschyzon merolae	43.42	1e-20	84.0
LLPS-Mod-3518	Monodelphis domestica	37.35	7e-07	47.4

LLPS-Abg-1384ABSGL_03865.1 scaffold 4679

Protein Sequence

Nucleotide Sequence

LLPS-Abg-1384
ABSGL_03865.1 scaffold 4679