LLPS-Xim-2863
EIF3D
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Eukaryotic translation initiation factor 3 subunit D |
Gene Name: | EIF3D, EIF3S7 |
Ensembl Gene: | ENSXMAG00000000954.2 |
Ensembl Protein: | ENSXMAP00000000942.2 |
Organism: | Xiphophorus maculatus |
Taxa ID: | 8083 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule | Predicted from orthologs | (View) |
▼ FUNCTION
mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSXMAT00000000945.2 | ENSXMAP00000000942.2 |
Ensembl | ENSXMAT00000031578.1 | ENSXMAP00000022155.1 |
Ensembl | ENSXMAT00000031693.1 | ENSXMAP00000031584.1 |
UniProt | A0A3B5QJ69, A0A3B5QJ69_XIPMA |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAKFHAPVIQ DNPSGWGPCA VPEKFKDMPY QPFSKGDRLG KVADWTGATY QDKRYTNKYS 60 61 SQFGGGSQYA YFHEEDETSF QLVDTAKTQK TAYQRNRMRF AQRNLRRDKD RRNLTQFNMQ 120 121 TLPKSAKQKE RDRMRLQKKF QKQFGVRQKW DQKSQAQLKP RDSSVEVRSD WEVKEEMDFP 180 181 RLMKMRYMEV SDPVDIECCG ALEYYDKAFD RITTRNEKQL KSIKRIFHTV TTTDDPVIRK 240 241 LAKTQGNVFA TDAILATLMC CTRSVNSWDI IVQRVGNKLF FDKRDNSDFD LLTVSETANE 300 301 PPQDEGNSFN SPRNLAMEAT YINHNFSQQC LRMGGERHKF PNSNPFVEED MDKSEVASVA 360 361 YRYRHWKLGE DIDLIVRCEH DGVMTGASGE VSFINVKTLN EWDSRYCNGV DWRQKLDSQR 420 421 GAVLATELKN NSYKLARWTC CAMLAGSEYL KLGYVSRYHV KDSSRHVILG TQQFKPNEFA 480 481 SQINLSMENA WGILRCVIDI CRKLDEGKYL ILKDPNKQVI RVYSLPEGTF SSDEEEEEEE 540 541 DEEDEEEEGE LLVFYFLPLL LQFVYWEQQK LLYINNVLKN VLIFCLLKKH SYEILILL 598 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGAAGT TTCACGCCCC TGTCATCCAG GACAACCCGT CCGGATGGGG CCCCTGCGCC 60 61 GTCCCAGAGA AGTTCAAGGA CATGCCGTAC CAACCGTTCA GCAAAGGAGA CCGACTGGGG 120 121 AAGGTTGCTG ACTGGACCGG AGCAACTTAC CAAGACAAGA GATACACGAA TAAATATTCG 180 181 TCTCAGTTTG GCGGCGGCAG TCAGTACGCT TACTTCCACG AGGAAGACGA GACAAGCTTC 240 241 CAGCTGGTGG ACACGGCCAA GACGCAGAAG ACGGCGTACC AGAGGAACCG CATGCGCTTT 300 301 GCTCAGAGGA ACCTGCGCAG AGACAAAGAC CGCAGGAATC TGACCCAGTT CAACATGCAG 360 361 ACGCTCCCGA AGAGCGCCAA GCAGAAGGAG AGGGATCGGA TGCGTCTGCA GAAGAAGTTC 420 421 CAGAAGCAGT TTGGAGTCCG ACAGAAGTGG GACCAGAAGT CTCAGGCCCA GCTGAAGCCC 480 481 AGAGACTCGT CAGTGGAGGT CCGGAGTGAC TGGGAGGTGA AGGAGGAGAT GGACTTCCCC 540 541 CGACTGATGA AGATGAGATA CATGGAGGTG TCCGACCCGG TCGACATAGA GTGCTGCGGC 600 601 GCGCTGGAAT ACTACGACAA GGCCTTCGAC CGCATCACCA CCCGCAACGA GAAGCAGCTG 660 661 AAGAGCATCA AGAGGATCTT CCACACCGTC ACCACCACCG ACGACCCGGT CATCAGAAAG 720 721 CTGGCCAAGA CGCAGGGCAA TGTGTTCGCC ACCGACGCCA TCCTGGCCAC ACTGATGTGC 780 781 TGCACACGCT CAGTCAACTC CTGGGACATC ATCGTCCAGA GAGTCGGCAA CAAGCTATTC 840 841 TTCGACAAGA GGGACAACTC CGACTTCGAT CTGCTGACTG TGAGCGAAAC GGCCAACGAG 900 901 CCTCCGCAGG ACGAAGGGAA CTCCTTCAAC TCCCCCCGTA ACCTGGCCAT GGAGGCCACC 960 961 TACATCAACC ACAACTTCAG CCAGCAGTGT TTACGCATGG GCGGAGAGAG ACACAAGTTC 1020 1021 CCCAACTCCA ACCCGTTTGT GGAGGAGGAC ATGGACAAGA GCGAGGTGGC GTCTGTGGCG 1080 1081 TACAGGTACC GCCACTGGAA GCTGGGGGAA GACATCGACC TGATCGTGCG CTGTGAGCAC 1140 1141 GACGGCGTGA TGACCGGCGC CAGTGGAGAA GTGTCGTTCA TCAACGTGAA GACGCTGAAC 1200 1201 GAGTGGGACT CCAGGTACTG TAACGGGGTG GACTGGCGTC AGAAGCTGGA CTCCCAGAGA 1260 1261 GGCGCCGTCC TGGCCACCGA GCTGAAGAAC AACAGCTACA AGCTGGCCCG CTGGACCTGC 1320 1321 TGCGCCATGC TGGCCGGCTC CGAGTACCTG AAGCTGGGGT ACGTCTCCCG CTACCACGTG 1380 1381 AAGGACTCGT CCCGCCACGT CATCCTGGGA ACCCAGCAGT TCAAACCCAA CGAGTTTGCC 1440 1441 AGCCAGATCA ACCTGAGCAT GGAGAACGCC TGGGGCATCC TGCGCTGCGT CATCGACATC 1500 1501 TGCCGCAAGC TGGACGAGGG CAAGTACCTG ATCCTGAAGG ACCCCAACAA GCAAGTGATC 1560 1561 CGGGTCTACA GCCTGCCTGA GGGAACCTTC AGCTCCGACG AAGAGGAGGA GGAAGAGGAG 1620 1621 GATGAAGAGG ACGAGGAGGA GGAAGATGAA GAGAATTAA 1659 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Eukaryotic 43S preinitiation complex | |
Cellular Component | Eukaryotic 48S preinitiation complex | |
Cellular Component | Eukaryotic translation initiation factor 3 complex | |
Molecular Function | MRNA cap binding | |
Molecular Function | Translation initiation factor activity | |
Biological Process | Cap-dependent translational initiation | |
Biological Process | Formation of cytoplasmic translation initiation complex |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Pof-0288 | Poecilia formosa | 99.62 | 0.0 | 1090 |
LLPS-Orn-0224 | Oreochromis niloticus | 98.31 | 0.0 | 1075 |
LLPS-Tar-2499 | Takifugu rubripes | 97.56 | 0.0 | 1070 |
LLPS-Scf-2046 | Scleropages formosus | 97.56 | 0.0 | 1074 |
LLPS-Ten-0898 | Tetraodon nigroviridis | 97.37 | 0.0 | 1068 |
LLPS-Scm-0385 | Scophthalmus maximus | 97.18 | 0.0 | 1062 |
LLPS-Asm-0924 | Astyanax mexicanus | 96.62 | 0.0 | 1061 |
LLPS-Gaa-2485 | Gasterosteus aculeatus | 96.62 | 0.0 | 1058 |
LLPS-Dar-3011 | Danio rerio | 96.43 | 0.0 | 1061 |
LLPS-Icp-1986 | Ictalurus punctatus | 95.49 | 0.0 | 1042 |
LLPS-Orl-1024 | Oryzias latipes | 94.93 | 0.0 | 1044 |
LLPS-Meg-1230 | Meleagris gallopavo | 93.62 | 0.0 | 553 |
LLPS-Pes-2903 | Pelodiscus sinensis | 93.61 | 0.0 | 1027 |
LLPS-Fia-2479 | Ficedula albicollis | 93.23 | 0.0 | 1023 |
LLPS-Gaga-1637 | Gallus gallus | 93.05 | 0.0 | 1021 |
LLPS-Tag-3257 | Taeniopygia guttata | 93.05 | 0.0 | 1020 |
LLPS-Anc-1118 | Anolis carolinensis | 92.86 | 0.0 | 1019 |
LLPS-Mod-3739 | Monodelphis domestica | 92.67 | 0.0 | 1018 |
LLPS-Leo-3409 | Lepisosteus oculatus | 92.5 | 1e-74 | 240 |
LLPS-Sah-2261 | Sarcophilus harrisii | 92.48 | 0.0 | 1017 |
LLPS-Aim-2630 | Ailuropoda melanoleuca | 92.29 | 0.0 | 1014 |
LLPS-Fec-1161 | Felis catus | 92.29 | 0.0 | 1014 |
LLPS-Urm-3810 | Ursus maritimus | 92.29 | 0.0 | 1014 |
LLPS-Caf-2014 | Canis familiaris | 92.29 | 0.0 | 1014 |
LLPS-Mum-3657 | Mus musculus | 92.11 | 0.0 | 1014 |
LLPS-Mea-3783 | Mesocricetus auratus | 92.11 | 0.0 | 1014 |
LLPS-Sus-1625 | Sus scrofa | 92.11 | 0.0 | 1014 |
LLPS-Ran-1225 | Rattus norvegicus | 92.11 | 0.0 | 1014 |
LLPS-Ova-0807 | Ovis aries | 92.11 | 0.0 | 1014 |
LLPS-Bot-3680 | Bos taurus | 92.11 | 0.0 | 1014 |
LLPS-Loa-4471 | Loxodonta africana | 92.11 | 0.0 | 1014 |
LLPS-Ict-3086 | Ictidomys tridecemlineatus | 92.11 | 0.0 | 1014 |
LLPS-Orc-1553 | Oryctolagus cuniculus | 91.92 | 0.0 | 1012 |
LLPS-Cap-0095 | Cavia porcellus | 91.92 | 0.0 | 1013 |
LLPS-Gog-4141 | Gorilla gorilla | 91.73 | 0.0 | 1011 |
LLPS-Caj-4346 | Callithrix jacchus | 91.73 | 0.0 | 1010 |
LLPS-Fud-2154 | Fukomys damarensis | 91.73 | 0.0 | 1013 |
LLPS-Chs-1975 | Chlorocebus sabaeus | 91.73 | 0.0 | 1010 |
LLPS-Maf-3286 | Macaca fascicularis | 91.73 | 0.0 | 1011 |
LLPS-Aon-0903 | Aotus nancymaae | 91.73 | 0.0 | 1011 |
LLPS-Cea-4551 | Cercocebus atys | 91.73 | 0.0 | 1011 |
LLPS-Myl-2186 | Myotis lucifugus | 91.73 | 0.0 | 1010 |
LLPS-Mal-4410 | Mandrillus leucophaeus | 91.73 | 0.0 | 1011 |
LLPS-Paa-1460 | Papio anubis | 91.73 | 0.0 | 1011 |
LLPS-Dio-2482 | Dipodomys ordii | 91.73 | 0.0 | 1011 |
LLPS-Otg-1742 | Otolemur garnettii | 91.73 | 0.0 | 1013 |
LLPS-Rhb-4374 | Rhinopithecus bieti | 91.73 | 0.0 | 1011 |
LLPS-Hos-1129 | Homo sapiens | 91.73 | 0.0 | 1011 |
LLPS-Pap-3608 | Pan paniscus | 91.73 | 0.0 | 1011 |
LLPS-Pat-4780 | Pan troglodytes | 91.73 | 0.0 | 1011 |
LLPS-Man-1486 | Macaca nemestrina | 91.73 | 0.0 | 1011 |
LLPS-Cas-3181 | Carlito syrichta | 91.73 | 0.0 | 1011 |
LLPS-Nol-2364 | Nomascus leucogenys | 91.73 | 0.0 | 1011 |
LLPS-Mam-3381 | Macaca mulatta | 91.73 | 0.0 | 1011 |
LLPS-Eqc-1780 | Equus caballus | 91.54 | 0.0 | 1012 |
LLPS-Tut-2382 | Tursiops truncatus | 91.35 | 0.0 | 998 |
LLPS-Xet-0896 | Xenopus tropicalis | 91.17 | 0.0 | 1018 |
LLPS-Lac-3153 | Latimeria chalumnae | 88.53 | 0.0 | 991 |
LLPS-Anp-2996 | Anas platyrhynchos | 85.53 | 0.0 | 914 |
LLPS-Poa-1913 | Pongo abelii | 83.83 | 0.0 | 892 |
LLPS-Ora-0494 | Ornithorhynchus anatinus | 80.99 | 0.0 | 867 |
LLPS-Cii-1655 | Ciona intestinalis | 66.11 | 0.0 | 731 |
LLPS-Cis-0512 | Ciona savignyi | 64.1 | 0.0 | 711 |
LLPS-Drm-0623 | Drosophila melanogaster | 59.21 | 0.0 | 645 |
LLPS-Mup-2657 | Mustela putorius furo | 58.73 | 6e-167 | 491 |
LLPS-Via-2135 | Vigna angularis | 53.04 | 3e-128 | 389 |
LLPS-Orbr-1877 | Oryza brachyantha | 52.21 | 1e-128 | 391 |
LLPS-Dac-2313 | Daucus carota | 51.35 | 7e-125 | 387 |
LLPS-Tum-0865 | Tuber melanosporum | 50.53 | 2e-89 | 285 |
LLPS-Ved-1368 | Verticillium dahliae | 48.98 | 5e-103 | 330 |
LLPS-Php-2446 | Physcomitrella patens | 48.52 | 7e-161 | 479 |
LLPS-Tru-0395 | Triticum urartu | 47.67 | 4e-121 | 388 |
LLPS-Miv-0073 | Microbotryum violaceum | 47.14 | 4e-107 | 341 |
LLPS-Amt-2061 | Amborella trichopoda | 45.27 | 3e-147 | 444 |
LLPS-Sob-2536 | Sorghum bicolor | 44.36 | 3e-146 | 442 |
LLPS-Mel-1160 | Melampsora laricipopulina | 44.33 | 3e-14 | 80.1 |
LLPS-Cae-1655 | Caenorhabditis elegans | 44.32 | 1e-142 | 432 |
LLPS-Sem-1792 | Selaginella moellendorffii | 44.12 | 3e-128 | 393 |
LLPS-Lem-1095 | Leptosphaeria maculans | 43.97 | 6e-98 | 311 |
LLPS-Put-1256 | Puccinia triticina | 43.87 | 6e-91 | 295 |
LLPS-Lep-1032 | Leersia perrieri | 43.83 | 2e-142 | 433 |
LLPS-Zem-0300 | Zea mays | 43.7 | 8e-146 | 441 |
LLPS-Prp-2201 | Prunus persica | 43.67 | 2e-140 | 427 |
LLPS-Orni-1287 | Oryza nivara | 43.65 | 8e-143 | 434 |
LLPS-Ori-1561 | Oryza indica | 43.65 | 8e-143 | 434 |
LLPS-Orb-1996 | Oryza barthii | 43.65 | 8e-143 | 434 |
LLPS-Orgl-1154 | Oryza glumaepatula | 43.65 | 8e-143 | 434 |
LLPS-Ors-2150 | Oryza sativa | 43.65 | 8e-143 | 434 |
LLPS-Orp-1597 | Oryza punctata | 43.65 | 7e-143 | 434 |
LLPS-Org-2176 | Oryza glaberrima | 43.65 | 8e-143 | 434 |
LLPS-Orr-1504 | Oryza rufipogon | 43.65 | 8e-143 | 434 |
LLPS-Orm-0984 | Oryza meridionalis | 43.65 | 8e-143 | 434 |
LLPS-Gag-1219 | Gaeumannomyces graminis | 43.64 | 7e-103 | 330 |
LLPS-Brd-1599 | Brachypodium distachyon | 43.54 | 2e-142 | 432 |
LLPS-Viv-1605 | Vitis vinifera | 43.54 | 6e-141 | 428 |
LLPS-Gas-0815 | Galdieria sulphuraria | 43.37 | 1e-138 | 421 |
LLPS-Cus-0362 | Cucumis sativus | 43.36 | 2e-142 | 432 |
LLPS-Sei-2512 | Setaria italica | 43.31 | 3e-144 | 437 |
LLPS-Sol-0114 | Solanum lycopersicum | 43.17 | 3e-145 | 440 |
LLPS-Coc-1094 | Corchorus capsularis | 43.09 | 8e-141 | 428 |
LLPS-Vir-0815 | Vigna radiata | 43.04 | 6e-138 | 421 |
LLPS-Nia-2380 | Nicotiana attenuata | 42.99 | 5e-145 | 439 |
LLPS-Met-1922 | Medicago truncatula | 42.91 | 3e-142 | 432 |
LLPS-Phv-0543 | Phaseolus vulgaris | 42.86 | 1e-137 | 419 |
LLPS-Sot-1983 | Solanum tuberosum | 42.8 | 6e-143 | 434 |
LLPS-Glm-1550 | Glycine max | 42.75 | 8e-137 | 417 |
LLPS-Gor-2060 | Gossypium raimondii | 42.27 | 1e-141 | 431 |
LLPS-Thc-2431 | Theobroma cacao | 42.24 | 7e-140 | 426 |
LLPS-Pot-2623 | Populus trichocarpa | 42.15 | 4e-139 | 424 |
LLPS-Mae-0920 | Manihot esculenta | 42.07 | 4e-137 | 419 |
LLPS-Blg-0787 | Blumeria graminis | 41.97 | 4e-118 | 369 |
LLPS-Tra-2851 | Triticum aestivum | 41.79 | 3e-137 | 419 |
LLPS-Hea-2399 | Helianthus annuus | 41.76 | 1e-141 | 430 |
LLPS-Hov-1957 | Hordeum vulgare | 41.56 | 3e-136 | 417 |
LLPS-Chc-0718 | Chondrus crispus | 41.39 | 2e-123 | 382 |
LLPS-Spr-1159 | Sporisorium reilianum | 41.3 | 1e-132 | 407 |
LLPS-Art-2168 | Arabidopsis thaliana | 41.23 | 3e-134 | 412 |
LLPS-Scc-0597 | Schizosaccharomyces cryophilus | 40.79 | 4e-135 | 413 |
LLPS-Arl-1845 | Arabidopsis lyrata | 40.36 | 9e-132 | 405 |
LLPS-Osl-0456 | Ostreococcus lucimarinus | 40.24 | 9e-98 | 311 |
LLPS-Asfu-0693 | Aspergillus fumigatus | 40.04 | 6e-118 | 369 |
LLPS-Usm-0200 | Ustilago maydis | 39.93 | 7e-130 | 400 |
LLPS-Chr-0650 | Chlamydomonas reinhardtii | 39.89 | 4e-129 | 397 |
LLPS-Nef-1024 | Neosartorya fischeri | 39.86 | 2e-117 | 368 |
LLPS-Scp-0485 | Schizosaccharomyces pombe | 39.68 | 5e-130 | 400 |
LLPS-Beb-0326 | Beauveria bassiana | 39.67 | 2e-114 | 360 |
LLPS-Brn-0441 | Brassica napus | 39.6 | 6e-125 | 387 |
LLPS-Brr-1662 | Brassica rapa | 39.6 | 4e-125 | 388 |
LLPS-Asf-0225 | Aspergillus flavus | 39.49 | 6e-115 | 362 |
LLPS-Aso-1184 | Aspergillus oryzae | 39.49 | 6e-115 | 362 |
LLPS-Trv-0019 | Trichoderma virens | 39.48 | 4e-116 | 364 |
LLPS-Crn-1580 | Cryptococcus neoformans | 39.43 | 1e-129 | 398 |
LLPS-Nec-0345 | Neurospora crassa | 39.38 | 2e-114 | 360 |
LLPS-Bro-1749 | Brassica oleracea | 39.32 | 8e-124 | 385 |
LLPS-Asni-0601 | Aspergillus niger | 39.31 | 2e-113 | 358 |
LLPS-Fus-0084 | Fusarium solani | 39.31 | 9e-114 | 358 |
LLPS-Trr-1436 | Trichoderma reesei | 39.13 | 1e-112 | 355 |
LLPS-Asn-1583 | Aspergillus nidulans | 38.66 | 3e-114 | 360 |
LLPS-Asc-1486 | Aspergillus clavatus | 38.66 | 3e-113 | 357 |
LLPS-Map-0162 | Magnaporthe poae | 38.55 | 7e-113 | 356 |
LLPS-Mua-0097 | Musa acuminata | 38.55 | 6e-102 | 325 |
LLPS-Pug-0543 | Puccinia graminis | 38.45 | 3e-126 | 391 |
LLPS-Pyt-0693 | Pyrenophora teres | 38.28 | 7e-110 | 348 |
LLPS-Phn-1564 | Phaeosphaeria nodorum | 38.24 | 2e-110 | 350 |
LLPS-Coo-1607 | Colletotrichum orbiculare | 38.22 | 7e-110 | 348 |
LLPS-Fuv-1542 | Fusarium verticillioides | 38.21 | 5e-108 | 343 |
LLPS-Scj-0627 | Schizosaccharomyces japonicus | 37.99 | 9e-122 | 379 |
LLPS-Pytr-1636 | Pyrenophora triticirepentis | 37.91 | 7e-109 | 345 |
LLPS-Fuo-0517 | Fusarium oxysporum | 37.87 | 9e-110 | 348 |
LLPS-Mao-1568 | Magnaporthe oryzae | 37.79 | 2e-113 | 357 |
LLPS-Cogr-1431 | Colletotrichum graminicola | 37.45 | 4e-109 | 346 |
LLPS-Abg-0977 | Absidia glauca | 37.33 | 1e-126 | 392 |
LLPS-Zyt-1203 | Zymoseptoria tritici | 37.32 | 1e-106 | 340 |
LLPS-Cog-0457 | Colletotrichum gloeosporioides | 37.28 | 3e-100 | 320 |
LLPS-Dos-1516 | Dothistroma septosporum | 36.58 | 1e-99 | 322 |
LLPS-Cym-1142 | Cyanidioschyzon merolae | 34.93 | 4e-70 | 245 |
LLPS-Yal-0966 | Yarrowia lipolytica | 34.66 | 2e-96 | 311 |
LLPS-Ast-0607 | Aspergillus terreus | 31.64 | 6e-42 | 160 |
LLPS-Kop-1473 | Komagataella pastoris | 31.07 | 2e-74 | 254 |