Schizosaccharomyces pombe      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 32 genes.  Reviewed (9 or Unreviewed (23

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Scp-0003
SPBC3B9.21
Q9P805
dcp1
2
LLPS-Scp-0124
SPAC19A8.12
O13828
dcp2
3
LLPS-Scp-0071
SPBC18E5.11c
O94752
edc3
4
LLPS-Scp-0021
SPAC57A7.04c
P31209
pab1
5
LLPS-Scp-0158
SPAC13A11.06
Q09737
SPAC13A11.06
6
LLPS-Scp-1664
SPAC20G4.08
O13892
SPAC20G4.08
7
LLPS-Scp-0059
SPBC19G7.10c
O42958
SPBC19G7.10c
8
LLPS-Scp-0110
SPBC776.09
Q09181
ste13
9
LLPS-Scp-0248
SPCC584.04
O74718
sup35
10
LLPS-Scp-0879
SPAC4G9.03
P33075
adk1
11
LLPS-Scp-0044
SPCC320.13c
O59790
ark1
12
LLPS-Scp-1087
SPAC4F10.07c
O36019
atg13
13
LLPS-Scp-1193
SPBC32H8.10
Q96WV9
cdk9
14
LLPS-Scp-1262
SPBC19F8.07
Q12126
crk1
15
LLPS-Scp-1371
SPBC16G5.18
Q09195
erg24
16
LLPS-Scp-0505
SPBC2D10.10c
P35551
fib1
17
LLPS-Scp-1063
SPBC20F10.01
Q06975
gar1
18
LLPS-Scp-0992
SPAC2F3.06c
O14089
kap104
19
LLPS-Scp-0669
SPBC30D10.06
O14352
lsm4
20
LLPS-Scp-0194
SPAC26A3.15c
Q10168
nsp1
21
LLPS-Scp-1112
SPAC1486.05
Q9UTK4
nup189
22
LLPS-Scp-1444
SPAC4H3.10c
Q10208
pyk1
23
LLPS-Scp-0249
SPBC28F2.12
P36594
rpb1
24
LLPS-Scp-0711
SPBC4F6.04
O74391
rpl2502
25
LLPS-Scp-0460
SPBC11C11.09c
O74306
rpl502
26
LLPS-Scp-0265
SPCC1840.03
O74476
sal3
27
LLPS-Scp-0263
SPCC16C4.07
O74452
scw1
28
LLPS-Scp-0645
SPAC644.16
Q9P6P7
SPAC644.16
29
LLPS-Scp-1163
SPBC21B10.03c
Q9USW1
SPBC21B10.03c
30
LLPS-Scp-1189
SPCC74.03c
O74536
ssp2
31
LLPS-Scp-0410
SPAC17C9.03
Q10475
tif471
32
LLPS-Scp-0481
SPAC1805.17
P14068
xpo1