LLPS-Sus-4211
PDCD4
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | PDCD4 |
Ensembl Gene: | ENSSSCG00000010627.3 |
Ensembl Protein: | ENSSSCP00000058733.1 |
Organism: | Sus scrofa |
Taxa ID: | 9823 |
LLPS Type: | Regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSSSCT00000051692.1 | ENSSSCP00000058733.1 |
Ensembl | ENSSSCT00000041632.1 | ENSSSCP00000044229.1 |
Ensembl | ENSSSCT00000011623.3 | ENSSSCP00000011321.3 |
Ensembl | ENSSSCT00000063953.1 | ENSSSCP00000051777.1 |
UniProt | A0A287BQE7, A0A287BQE7_PIG | |
GeneBank | AEMK02000096 | |
RefSeq | XM_001927049.4 | XP_001927084.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MDVENEQILN VTPTDPDNLS DSLFSGDEEN AGTEEIKNEI NGNWISASSI NEARINAKAK 60 61 RRLRKNSSRD SGRGDSVSDN GSEGLRSGVT VPTSPKGRLL DRRSRSGKGR GLPKKGGAGG 120 121 KGVWGTPGQV YDVEEVDVKD PNYDDDQENC VYETVVLPLD EMAFEKTLTP IIQEYFEHGD 180 181 TNEVAEMLRD LNLGEMKSGV PVLAVSLALE GKASHREMTS KLLSDLCGTV MSTNDVEKSF 240 241 DKLLKELPEL ALDTPRAPQL VGQFIARAVG DGILCNTYID SYKGTVDCVQ ARAALDKATV 300 301 LLSMSKGGRR KDSVWGSGGG QQSVNHLVKE IDMLLKEYLL SGDISEAEHC LKELEVPHFH 360 361 HELVYEAIIM VLESTGESTF KMILDLLKSL WKSSTITLDQ MKRGYERIYN EIPDINLDVP 420 421 HSYSMLERFV EECFQAGIIS KQLRDLCPSR GRKRFVSEGD GGRLKPESY 469 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGAGACCA TTCAAGATCC TGATAATTTA AGTGACTCTC TCTTTTCTGG AGATGAAGAA 60 61 AATGCTGGGA CTGAGGAAAT AAAGAATGAG ATAAATGGAA ATTGGATTTC GGCATCTTCC 120 121 ATTAATGAAG CAAGAATTAA TGCCAAGGCA AAAAGACGAC TACGGAAAAA CTCATCCCGT 180 181 GACTCTGGCA GAGGTGATTC GGTCAGTGAT AATGGAAGTG AAGGCCTTAG AAGTGGAGTA 240 241 ACTGTACCAA CCAGTCCAAA GGGAAGGTTG CTAGATAGAC GATCCAGATC TGGGAAAGGA 300 301 AGGGGACTAC CAAAGAAAGG TGGTGCTGGA GGCAAAGGTG TCTGGGGTAC ACCTGGACAG 360 361 GTATATGATG TGGAGGAAGT GGATGTGAAA GATCCTAACT ATGATGATGA CCAGGAGAAT 420 421 TGTGTTTATG AAACTGTAGT TTTGCCTTTG GATGAAATGG CATTTGAGAA GACTTTAACA 480 481 CCAATCATAC AGGAATATTT TGAGCACGGA GATACTAATG AAGTTGCGGA AATGCTAAGA 540 541 GATTTAAATC TTGGTGAAAT GAAAAGTGGA GTACCGGTGT TAGCAGTGTC CTTAGCCTTG 600 601 GAGGGAAAAG CTAGTCATAG AGAAATGACA TCTAAGCTTC TTTCTGACCT TTGTGGGACA 660 661 GTAATGAGCA CAAATGATGT AGAAAAATCA TTTGATAAAT TGTTGAAAGA GCTACCTGAA 720 721 TTAGCATTGG ATACTCCTAG AGCACCACAG TTGGTGGGCC AGTTTATTGC TAGAGCTGTT 780 781 GGAGATGGAA TTTTATGTAA TACCTATATT GATAGTTACA AAGGAACTGT AGACTGTGTA 840 841 CAAGCTAGAG CTGCTCTGGA CAAGGCTACG GTGCTCCTGA GTATGTCTAA AGGTGGAAGG 900 901 CGCAAAGACA GTGTATGGGG CTCTGGAGGT GGGCAGCAGT CTGTTAATCA CCTTGTTAAA 960 961 GAGATTGATA TGCTGCTGAA AGAGTATTTA CTCTCTGGAG ACATATCGGA AGCTGAACAT 1020 1021 TGCCTTAAGG AATTGGAAGT ACCTCATTTT CACCATGAGC TTGTATATGA AGCCATTATA 1080 1081 ATGGTTTTAG AGTCAACTGG AGAAAGTACC TTTAAAATGA TTTTGGATTT ATTAAAATCT 1140 1141 CTTTGGAAAT CTTCTACCAT TACTCTAGAC CAAATGAAAA GAGGTTATGA GAGAATTTAC 1200 1201 AATGAAATTC CAGACATTAA TCTAGACGTC CCACATTCAT ACTCCATGCT TGAGCGATTT 1260 1261 GTAGAAGAAT GTTTTCAGGC CGGAATAATT TCCAAACAGC TCAGAGATCT TTGTCCTTCA 1320 1321 AGGGGCAGAA AACGTTTTGT AAGTGAAGGA GATGGAGGTC GTCTTAAACC AGAGAGCTAC 1380 1381 TGA 1383 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Eqc-1141 | Equus caballus | 98.46 | 0.0 | 790 |
LLPS-Mup-0498 | Mustela putorius furo | 98.29 | 0.0 | 818 |
LLPS-Cas-3717 | Carlito syrichta | 98.08 | 0.0 | 816 |
LLPS-Caf-4530 | Canis familiaris | 97.88 | 0.0 | 813 |
LLPS-Orc-2343 | Oryctolagus cuniculus | 97.87 | 0.0 | 815 |
LLPS-Pat-1489 | Pan troglodytes | 97.87 | 0.0 | 813 |
LLPS-Pap-3879 | Pan paniscus | 97.87 | 0.0 | 813 |
LLPS-Urm-3282 | Ursus maritimus | 97.87 | 0.0 | 813 |
LLPS-Fec-4783 | Felis catus | 97.87 | 0.0 | 816 |
LLPS-Gog-0930 | Gorilla gorilla | 97.87 | 0.0 | 811 |
LLPS-Ova-3538 | Ovis aries | 97.87 | 0.0 | 816 |
LLPS-Mea-2992 | Mesocricetus auratus | 97.65 | 0.0 | 816 |
LLPS-Dio-1628 | Dipodomys ordii | 97.65 | 0.0 | 814 |
LLPS-Hos-3828 | Homo sapiens | 97.44 | 0.0 | 812 |
LLPS-Bot-3671 | Bos taurus | 97.44 | 0.0 | 814 |
LLPS-Otg-2442 | Otolemur garnettii | 97.23 | 0.0 | 810 |
LLPS-Ict-3685 | Ictidomys tridecemlineatus | 97.23 | 0.0 | 812 |
LLPS-Aim-2080 | Ailuropoda melanoleuca | 97.23 | 0.0 | 807 |
LLPS-Poa-3723 | Pongo abelii | 97.01 | 0.0 | 800 |
LLPS-Aon-3993 | Aotus nancymaae | 97.01 | 0.0 | 807 |
LLPS-Caj-3019 | Callithrix jacchus | 96.8 | 0.0 | 804 |
LLPS-Mum-0801 | Mus musculus | 96.8 | 0.0 | 810 |
LLPS-Chs-2063 | Chlorocebus sabaeus | 96.8 | 0.0 | 806 |
LLPS-Ran-4353 | Rattus norvegicus | 96.8 | 0.0 | 810 |
LLPS-Cea-2234 | Cercocebus atys | 96.59 | 0.0 | 805 |
LLPS-Myl-2602 | Myotis lucifugus | 96.59 | 0.0 | 808 |
LLPS-Nol-4455 | Nomascus leucogenys | 96.54 | 0.0 | 781 |
LLPS-Mam-3528 | Macaca mulatta | 96.33 | 0.0 | 784 |
LLPS-Paa-3955 | Papio anubis | 96.33 | 0.0 | 785 |
LLPS-Mal-3962 | Mandrillus leucophaeus | 96.33 | 0.0 | 785 |
LLPS-Man-2265 | Macaca nemestrina | 96.3 | 0.0 | 780 |
LLPS-Maf-0837 | Macaca fascicularis | 96.3 | 0.0 | 780 |
LLPS-Fud-0288 | Fukomys damarensis | 96.16 | 0.0 | 803 |
LLPS-Cap-1711 | Cavia porcellus | 95.74 | 0.0 | 796 |
LLPS-Mod-3659 | Monodelphis domestica | 95.52 | 0.0 | 799 |
LLPS-Sah-1964 | Sarcophilus harrisii | 95.52 | 0.0 | 799 |
LLPS-Rhb-4554 | Rhinopithecus bieti | 94.85 | 0.0 | 775 |
LLPS-Ora-0937 | Ornithorhynchus anatinus | 93.6 | 0.0 | 784 |
LLPS-Loa-2885 | Loxodonta africana | 90.02 | 0.0 | 738 |
LLPS-Pes-0037 | Pelodiscus sinensis | 86.99 | 0.0 | 702 |
LLPS-Fia-1126 | Ficedula albicollis | 86.14 | 0.0 | 702 |
LLPS-Tag-1332 | Taeniopygia guttata | 85.93 | 0.0 | 701 |
LLPS-Anp-2784 | Anas platyrhynchos | 84.86 | 0.0 | 696 |
LLPS-Gaga-3889 | Gallus gallus | 84.22 | 0.0 | 696 |
LLPS-Meg-3038 | Meleagris gallopavo | 84.01 | 0.0 | 690 |
LLPS-Anc-0272 | Anolis carolinensis | 83.58 | 0.0 | 693 |
LLPS-Xet-1249 | Xenopus tropicalis | 74.19 | 0.0 | 593 |
LLPS-Lac-2491 | Latimeria chalumnae | 72.71 | 0.0 | 587 |
LLPS-Leo-0275 | Lepisosteus oculatus | 72.34 | 0.0 | 581 |
LLPS-Scf-3007 | Scleropages formosus | 70.41 | 0.0 | 560 |
LLPS-Dar-4184 | Danio rerio | 69.7 | 0.0 | 552 |
LLPS-Asm-3156 | Astyanax mexicanus | 69.49 | 0.0 | 540 |
LLPS-Icp-3080 | Ictalurus punctatus | 68.43 | 0.0 | 533 |
LLPS-Orn-2565 | Oreochromis niloticus | 68.28 | 0.0 | 535 |
LLPS-Orl-3849 | Oryzias latipes | 67.84 | 5e-160 | 468 |
LLPS-Pof-2161 | Poecilia formosa | 67.15 | 5e-174 | 505 |
LLPS-Gaa-0971 | Gasterosteus aculeatus | 66.95 | 9e-174 | 504 |
LLPS-Scm-3401 | Scophthalmus maximus | 66.74 | 3e-180 | 520 |
LLPS-Tar-2980 | Takifugu rubripes | 64.9 | 2e-174 | 505 |
LLPS-Ten-3386 | Tetraodon nigroviridis | 64.69 | 2e-167 | 488 |
LLPS-Xim-0897 | Xiphophorus maculatus | 63.11 | 7e-160 | 469 |
LLPS-Cii-2199 | Ciona intestinalis | 43.2 | 2e-76 | 253 |
LLPS-Drm-2019 | Drosophila melanogaster | 41.89 | 8e-77 | 255 |
LLPS-Cis-2071 | Ciona savignyi | 40.62 | 9e-75 | 249 |
LLPS-Vir-1876 | Vigna radiata | 33.43 | 4e-35 | 142 |
LLPS-Via-1892 | Vigna angularis | 33.43 | 4e-35 | 142 |
LLPS-Viv-0163 | Vitis vinifera | 33.33 | 1e-34 | 141 |
LLPS-Sei-1444 | Setaria italica | 33.33 | 1e-29 | 127 |
LLPS-Phv-1438 | Phaseolus vulgaris | 33.13 | 5e-35 | 142 |
LLPS-Cus-0623 | Cucumis sativus | 33.03 | 1e-32 | 135 |
LLPS-Org-1896 | Oryza glaberrima | 33.02 | 4e-36 | 145 |
LLPS-Orbr-0163 | Oryza brachyantha | 32.97 | 1e-29 | 126 |
LLPS-Sob-1741 | Sorghum bicolor | 32.97 | 1e-29 | 127 |
LLPS-Mua-1772 | Musa acuminata | 32.92 | 7e-35 | 140 |
LLPS-Orp-2404 | Oryza punctata | 32.82 | 7e-35 | 142 |
LLPS-Ors-1969 | Oryza sativa | 32.82 | 6e-36 | 145 |
LLPS-Orr-1241 | Oryza rufipogon | 32.82 | 6e-36 | 145 |
LLPS-Orm-1009 | Oryza meridionalis | 32.82 | 6e-36 | 145 |
LLPS-Orb-1723 | Oryza barthii | 32.82 | 6e-36 | 145 |
LLPS-Ori-1400 | Oryza indica | 32.82 | 6e-36 | 145 |
LLPS-Orgl-1079 | Oryza glumaepatula | 32.82 | 6e-36 | 145 |
LLPS-Pot-2231 | Populus trichocarpa | 32.71 | 2e-33 | 137 |
LLPS-Coc-1389 | Corchorus capsularis | 32.69 | 2e-31 | 132 |
LLPS-Hea-0247 | Helianthus annuus | 32.67 | 1e-33 | 138 |
LLPS-Glm-0865 | Glycine max | 32.62 | 3e-33 | 137 |
LLPS-Brd-0810 | Brachypodium distachyon | 32.61 | 9e-37 | 147 |
LLPS-Lep-0563 | Leersia perrieri | 32.61 | 8e-29 | 124 |
LLPS-Php-1996 | Physcomitrella patens | 32.58 | 6e-35 | 142 |
LLPS-Orni-1797 | Oryza nivara | 32.51 | 2e-35 | 144 |
LLPS-Nia-2624 | Nicotiana attenuata | 32.5 | 7e-35 | 142 |
LLPS-Hov-2030 | Hordeum vulgare | 32.5 | 5e-38 | 151 |
LLPS-Sol-1136 | Solanum lycopersicum | 32.48 | 6e-33 | 136 |
LLPS-Prp-0133 | Prunus persica | 32.36 | 3e-32 | 134 |
LLPS-Thc-2180 | Theobroma cacao | 32.35 | 9e-32 | 132 |
LLPS-Tru-1224 | Triticum urartu | 32.3 | 2e-38 | 151 |
LLPS-Tra-0747 | Triticum aestivum | 32.3 | 3e-38 | 152 |
LLPS-Gor-2627 | Gossypium raimondii | 32.19 | 3e-33 | 137 |
LLPS-Met-2157 | Medicago truncatula | 32.19 | 2e-30 | 129 |
LLPS-Mae-2080 | Manihot esculenta | 31.99 | 1e-27 | 120 |
LLPS-Zem-1181 | Zea mays | 31.88 | 1e-28 | 123 |
LLPS-Bro-2874 | Brassica oleracea | 31.69 | 4e-26 | 115 |
LLPS-Sem-1095 | Selaginella moellendorffii | 31.61 | 7e-36 | 144 |
LLPS-Chr-1522 | Chlamydomonas reinhardtii | 31.53 | 2e-32 | 135 |
LLPS-Brr-0026 | Brassica rapa | 31.34 | 1e-25 | 114 |
LLPS-Brn-2563 | Brassica napus | 31.34 | 2e-25 | 114 |
LLPS-Amt-0164 | Amborella trichopoda | 31.21 | 7e-28 | 121 |
LLPS-Dac-2381 | Daucus carota | 31.16 | 1e-26 | 117 |
LLPS-Art-2867 | Arabidopsis thaliana | 30.99 | 6e-25 | 112 |
LLPS-Arl-1294 | Arabidopsis lyrata | 30.69 | 5e-25 | 112 |
LLPS-Sot-1122 | Solanum tuberosum | 30.22 | 7e-27 | 118 |
LLPS-Osl-1203 | Ostreococcus lucimarinus | 27.48 | 3e-28 | 119 |