LLPS-Ran-4613
Idh2
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Isocitrate dehydrogenase [NADP], mitochondrial |
Gene Name: | Idh2 |
Ensembl Gene: | ENSRNOG00000013949.7 |
Ensembl Protein: | ENSRNOP00000069080.1 |
Organism: | Rattus norvegicus |
Taxa ID: | 10116 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, Postsynaptic density | Predicted from orthologs | (View) |
▼ FUNCTION
Plays a role in intermediary metabolism and energy production. It may tightly associate or interact with the pyruvate dehydrogenase complex (By similarity). |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSRNOT00000085988.1 | ENSRNOP00000069080.1 |
Ensembl | ENSRNOT00000019059.5 | ENSRNOP00000019059.3 |
UniProt | P56574, IDHP_RAT, Q6DGF1 | |
GeneBank | BC076398 | AAH76398.1 |
RefSeq | NM_001014161.1 | NP_001014183.1 |
Entrez | 361596 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAGYLRAVSS LCRASGSTRT WAPAALNVPS WPEQPRRHYA EKRIKVEKPV VEMDGDEMTR 60 61 IIWQFIKEKL ILPHVDVQLK YFDLGLPNRD QTNDQVTIDS ALATQKYSVA VKCATITPDE 120 121 ARVEEFKLKK MWKSPNGTIR NILGGTVFRE PIICKNIPRL VPGWTKPITI GRHAHGDQYK 180 181 ATDFVVDRAG MFKLVFTPKD GSGAKEWEVY NFPAGGVGMG MYNTDESISG FAHSCFQYSI 240 241 QKKWPLYLST KNTIMKAYDG RFKDIFQEIF DKHYKTDFDK NKIWYEHRLI DDMVAQVLKS 300 301 SGGFVWACKN YDGDVQSDIL AQGFGSLGLM TSVLVCPDGK TIEAEAAHGT VTRHYREHQK 360 361 GRPTSTNPIA SIFAWTRGLE HRGKLDGNQD LIRFAQTLEK VCVQTVESGA MTKDLAGCIH 420 421 GLSNVKLNEH FLNTTDFLDT IKSNLDRALG KQ 452 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCCGGCT ATCTGCGGGC CGTGAGCTCG CTCTGCAGAG CCTCGGGCTC AACACGGACC 60 61 TGGGCACCGG CTGCACTGAA TGTCCCCAGC TGGCCGGAGC AGCCGCGGCG CCACTATGCT 120 121 GAGAAGAGAA TCAAGGTGGA GAAGCCGGTG GTGGAGATGG ATGGCGATGA GATGACCCGG 180 181 ATCATCTGGC AGTTCATCAA GGAGAAGCTC ATCCTGCCTC ACGTGGATGT CCAGCTCAAG 240 241 TATTTTGACC TTGGGCTTCC AAACCGTGAC CAGACCAATG ACCAGGTCAC CATCGACTCT 300 301 GCGCTGGCCA CTCAGAAGTA CAGTGTGGCT GTTAAGTGTG CTACAATCAC CCCCGATGAG 360 361 GCCCGTGTGG AAGAGTTCAA GCTGAAGAAA ATGTGGAAGA GCCCTAACGG AACTATCCGT 420 421 AACATCCTTG GGGGAACGGT CTTCAGAGAG CCAATTATCT GCAAAAATAT CCCCCGCCTT 480 481 GTCCCTGGCT GGACCAAGCC CATCACCATT GGCAGACACG CCCATGGCGA CCAGTACAAG 540 541 GCCACAGATT TTGTGGTAGA TCGAGCTGGC ATGTTCAAGT TGGTCTTCAC CCCAAAGGAT 600 601 GGCAGTGGTG CCAAGGAGTG GGAGGTGTAT AACTTCCCTG CCGGAGGCGT TGGTATGGGG 660 661 ATGTACAACA CCGACGAGTC CATTTCGGGC TTCGCGCACA GCTGCTTCCA GTACTCTATC 720 721 CAGAAGAAAT GGCCGCTCTA CTTGAGCACC AAGAACACCA TTATGAAGGC CTATGACGGG 780 781 CGTTTCAAGG ACATCTTCCA GGAGATCTTT GACAAGCACT ATAAGACTGA CTTTGACAAG 840 841 AATAAGATCT GGTACGAGCA TCGGCTCATT GACGACATGG TGGCTCAGGT GCTCAAGTCT 900 901 TCCGGTGGCT TTGTGTGGGC CTGCAAGAAC TATGACGGAG ATGTACAGTC TGACATCCTG 960 961 GCTCAAGGAT TTGGCTCCCT TGGCCTGATG ACATCTGTGC TGGTCTGCCC TGACGGGAAG 1020 1021 ACCATTGAAG CTGAGGCTGC TCACGGGACA GTCACCCGCC ACTACCGAGA ACACCAGAAG 1080 1081 GGCCGGCCCA CCAGTACCAA CCCTATTGCC AGCATCTTTG CCTGGACACG GGGTCTGGAG 1140 1141 CATCGAGGGA AGCTGGATGG GAACCAGGAC CTCATCAGGT TTGCACAGAC TCTGGAGAAG 1200 1201 GTGTGCGTGC AGACTGTGGA GAGCGGAGCT ATGACCAAGG ACCTGGCTGG CTGCATCCAT 1260 1261 GGCCTCAGCA ATGTGAAGCT GAATGAGCAC TTCCTGAACA CCACAGACTT CCTGGACACC 1320 1321 ATTAAGAGCA ACCTGGACAG AGCTCTGGGC AAGCAGTAG 1359 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytosol | |
Cellular Component | Mitochondrion | |
Cellular Component | Peroxisome | |
Molecular Function | Isocitrate dehydrogenase (NADP+) activity | |
Molecular Function | Magnesium ion binding | |
Molecular Function | NAD binding | |
Molecular Function | Protein homodimerization activity | |
Biological Process | 2-oxoglutarate metabolic process | |
Biological Process | Glyoxylate cycle | |
Biological Process | Isocitrate metabolic process | |
Biological Process | NADP biosynthetic process | |
Biological Process | NADP metabolic process | |
Biological Process | Negative regulation of glial cell migration | |
Biological Process | Negative regulation of glial cell proliferation | |
Biological Process | Negative regulation of matrix metallopeptidase secretion | |
Biological Process | Tricarboxylic acid cycle |
▼ ANNOTATION
Physicochemical | ||||
Compute pI/Mw | AAindex |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Mum-4480 | Mus musculus | 98.89 | 0.0 | 939 |
LLPS-Mam-3410 | Macaca mulatta | 97.25 | 0.0 | 824 |
LLPS-Fud-2394 | Fukomys damarensis | 97.09 | 0.0 | 845 |
LLPS-Mea-2525 | Mesocricetus auratus | 96.9 | 0.0 | 924 |
LLPS-Urm-3144 | Ursus maritimus | 96.89 | 0.0 | 725 |
LLPS-Caf-2123 | Canis familiaris | 96.37 | 0.0 | 844 |
LLPS-Loa-1811 | Loxodonta africana | 95.88 | 0.0 | 837 |
LLPS-Tut-1848 | Tursiops truncatus | 95.88 | 0.0 | 841 |
LLPS-Aim-4259 | Ailuropoda melanoleuca | 95.87 | 0.0 | 837 |
LLPS-Sah-0715 | Sarcophilus harrisii | 95.64 | 0.0 | 838 |
LLPS-Pap-1106 | Pan paniscus | 95.36 | 0.0 | 866 |
LLPS-Cas-2948 | Carlito syrichta | 95.35 | 0.0 | 908 |
LLPS-Orc-2336 | Oryctolagus cuniculus | 95.13 | 0.0 | 906 |
LLPS-Ict-0540 | Ictidomys tridecemlineatus | 95.13 | 0.0 | 907 |
LLPS-Pat-2155 | Pan troglodytes | 94.91 | 0.0 | 907 |
LLPS-Rhb-4312 | Rhinopithecus bieti | 94.91 | 0.0 | 907 |
LLPS-Gog-3800 | Gorilla gorilla | 94.91 | 0.0 | 907 |
LLPS-Man-1676 | Macaca nemestrina | 94.69 | 0.0 | 905 |
LLPS-Hos-0643 | Homo sapiens | 94.69 | 0.0 | 905 |
LLPS-Cea-1367 | Cercocebus atys | 94.69 | 0.0 | 905 |
LLPS-Chs-1107 | Chlorocebus sabaeus | 94.69 | 0.0 | 905 |
LLPS-Paa-1273 | Papio anubis | 94.69 | 0.0 | 905 |
LLPS-Fec-3358 | Felis catus | 94.68 | 0.0 | 899 |
LLPS-Poa-0590 | Pongo abelii | 94.47 | 0.0 | 906 |
LLPS-Eqc-4335 | Equus caballus | 94.47 | 0.0 | 901 |
LLPS-Sus-4632 | Sus scrofa | 94.47 | 0.0 | 902 |
LLPS-Maf-1727 | Macaca fascicularis | 94.47 | 0.0 | 904 |
LLPS-Bot-4096 | Bos taurus | 94.47 | 0.0 | 902 |
LLPS-Nol-3714 | Nomascus leucogenys | 94.25 | 0.0 | 902 |
LLPS-Mup-0441 | Mustela putorius furo | 94.22 | 0.0 | 893 |
LLPS-Otg-2869 | Otolemur garnettii | 94.03 | 0.0 | 898 |
LLPS-Caj-1238 | Callithrix jacchus | 94.03 | 0.0 | 898 |
LLPS-Cap-4581 | Cavia porcellus | 93.58 | 0.0 | 890 |
LLPS-Fia-0857 | Ficedula albicollis | 93.0 | 0.0 | 790 |
LLPS-Mal-3639 | Mandrillus leucophaeus | 92.92 | 0.0 | 846 |
LLPS-Anc-0766 | Anolis carolinensis | 91.76 | 0.0 | 829 |
LLPS-Meg-0508 | Meleagris gallopavo | 91.54 | 0.0 | 652 |
LLPS-Dio-3628 | Dipodomys ordii | 91.35 | 0.0 | 845 |
LLPS-Lac-0308 | Latimeria chalumnae | 89.64 | 0.0 | 678 |
LLPS-Aon-3269 | Aotus nancymaae | 89.55 | 0.0 | 874 |
LLPS-Mod-2712 | Monodelphis domestica | 88.32 | 0.0 | 846 |
LLPS-Gaga-0569 | Gallus gallus | 88.17 | 0.0 | 833 |
LLPS-Myl-3809 | Myotis lucifugus | 87.28 | 0.0 | 827 |
LLPS-Xet-2971 | Xenopus tropicalis | 85.49 | 0.0 | 813 |
LLPS-Leo-1022 | Lepisosteus oculatus | 85.18 | 0.0 | 811 |
LLPS-Orn-0156 | Oreochromis niloticus | 84.33 | 0.0 | 802 |
LLPS-Ten-3075 | Tetraodon nigroviridis | 84.26 | 0.0 | 807 |
LLPS-Tar-0733 | Takifugu rubripes | 84.26 | 0.0 | 803 |
LLPS-Scf-3927 | Scleropages formosus | 84.11 | 0.0 | 803 |
LLPS-Pof-0365 | Poecilia formosa | 83.89 | 0.0 | 801 |
LLPS-Xim-1387 | Xiphophorus maculatus | 83.44 | 0.0 | 796 |
LLPS-Asm-3271 | Astyanax mexicanus | 83.07 | 0.0 | 789 |
LLPS-Gaa-2351 | Gasterosteus aculeatus | 82.96 | 0.0 | 787 |
LLPS-Orl-2856 | Oryzias latipes | 82.78 | 0.0 | 795 |
LLPS-Ora-3461 | Ornithorhynchus anatinus | 81.54 | 0.0 | 749 |
LLPS-Scm-2244 | Scophthalmus maximus | 80.44 | 0.0 | 778 |
LLPS-Icp-0242 | Ictalurus punctatus | 77.18 | 0.0 | 771 |
LLPS-Cis-0102 | Ciona savignyi | 77.16 | 0.0 | 687 |
LLPS-Cii-0411 | Ciona intestinalis | 76.63 | 0.0 | 681 |
LLPS-Mua-1677 | Musa acuminata | 71.5 | 0.0 | 597 |
LLPS-Asf-1316 | Aspergillus flavus | 70.67 | 0.0 | 558 |
LLPS-Sol-2369 | Solanum lycopersicum | 70.3 | 0.0 | 599 |
LLPS-Abg-1928 | Absidia glauca | 70.12 | 0.0 | 605 |
LLPS-Sem-2460 | Selaginella moellendorffii | 70.02 | 0.0 | 599 |
LLPS-Zem-2436 | Zea mays | 69.9 | 0.0 | 592 |
LLPS-Pot-1248 | Populus trichocarpa | 69.83 | 0.0 | 598 |
LLPS-Nia-0951 | Nicotiana attenuata | 69.83 | 0.0 | 601 |
LLPS-Hea-0996 | Helianthus annuus | 69.73 | 0.0 | 600 |
LLPS-Php-0116 | Physcomitrella patens | 69.51 | 0.0 | 589 |
LLPS-Aso-1278 | Aspergillus oryzae | 69.5 | 0.0 | 546 |
LLPS-Cae-2008 | Caenorhabditis elegans | 69.43 | 0.0 | 613 |
LLPS-Sob-0922 | Sorghum bicolor | 69.42 | 0.0 | 591 |
LLPS-Sei-0654 | Setaria italica | 69.42 | 0.0 | 592 |
LLPS-Bro-1492 | Brassica oleracea | 69.36 | 0.0 | 585 |
LLPS-Orgl-0801 | Oryza glumaepatula | 69.34 | 0.0 | 593 |
LLPS-Prp-0869 | Prunus persica | 69.31 | 0.0 | 598 |
LLPS-Brn-1369 | Brassica napus | 69.29 | 0.0 | 598 |
LLPS-Dac-0559 | Daucus carota | 69.25 | 0.0 | 597 |
LLPS-Met-0759 | Medicago truncatula | 69.21 | 0.0 | 594 |
LLPS-Ors-1098 | Oryza sativa | 69.17 | 0.0 | 593 |
LLPS-Orr-0068 | Oryza rufipogon | 69.17 | 0.0 | 593 |
LLPS-Orb-1355 | Oryza barthii | 69.1 | 0.0 | 592 |
LLPS-Sot-0130 | Solanum tuberosum | 69.08 | 0.0 | 602 |
LLPS-Orm-1255 | Oryza meridionalis | 69.02 | 0.0 | 585 |
LLPS-Orbr-0429 | Oryza brachyantha | 68.93 | 0.0 | 592 |
LLPS-Org-1330 | Oryza glaberrima | 68.93 | 0.0 | 587 |
LLPS-Ori-0994 | Oryza indica | 68.93 | 0.0 | 587 |
LLPS-Orni-1202 | Oryza nivara | 68.93 | 0.0 | 587 |
LLPS-Gor-0915 | Gossypium raimondii | 68.86 | 0.0 | 590 |
LLPS-Lep-2108 | Leersia perrieri | 68.86 | 0.0 | 585 |
LLPS-Coc-0574 | Corchorus capsularis | 68.84 | 0.0 | 598 |
LLPS-Amt-0771 | Amborella trichopoda | 68.8 | 0.0 | 584 |
LLPS-Thc-2314 | Theobroma cacao | 68.8 | 0.0 | 590 |
LLPS-Orp-0216 | Oryza punctata | 68.78 | 0.0 | 586 |
LLPS-Via-0664 | Vigna angularis | 68.69 | 0.0 | 601 |
LLPS-Art-2459 | Arabidopsis thaliana | 68.63 | 0.0 | 598 |
LLPS-Phv-1039 | Phaseolus vulgaris | 68.63 | 0.0 | 589 |
LLPS-Arl-1135 | Arabidopsis lyrata | 68.63 | 0.0 | 597 |
LLPS-Mae-1858 | Manihot esculenta | 68.45 | 0.0 | 597 |
LLPS-Glm-2375 | Glycine max | 68.45 | 0.0 | 595 |
LLPS-Vir-0897 | Vigna radiata | 68.45 | 0.0 | 590 |
LLPS-Brr-1548 | Brassica rapa | 68.28 | 0.0 | 583 |
LLPS-Cus-0461 | Cucumis sativus | 68.24 | 0.0 | 590 |
LLPS-Viv-2447 | Vitis vinifera | 68.12 | 0.0 | 598 |
LLPS-Chr-1711 | Chlamydomonas reinhardtii | 67.89 | 0.0 | 607 |
LLPS-Hov-0561 | Hordeum vulgare | 67.88 | 0.0 | 584 |
LLPS-Tra-2939 | Triticum aestivum | 67.88 | 0.0 | 581 |
LLPS-Dar-3474 | Danio rerio | 67.82 | 0.0 | 590 |
LLPS-Asn-0762 | Aspergillus nidulans | 67.24 | 0.0 | 561 |
LLPS-Blg-1556 | Blumeria graminis | 67.0 | 0.0 | 568 |
LLPS-Brd-0694 | Brachypodium distachyon | 66.83 | 0.0 | 571 |
LLPS-Cogr-0254 | Colletotrichum graminicola | 66.34 | 0.0 | 566 |
LLPS-Yal-0857 | Yarrowia lipolytica | 66.34 | 0.0 | 563 |
LLPS-Asfu-1413 | Aspergillus fumigatus | 66.01 | 0.0 | 560 |
LLPS-Miv-0522 | Microbotryum violaceum | 65.85 | 0.0 | 560 |
LLPS-Trv-0903 | Trichoderma virens | 65.85 | 0.0 | 565 |
LLPS-Tru-0011 | Triticum urartu | 65.8 | 0.0 | 572 |
LLPS-Scs-0130 | Sclerotinia sclerotiorum | 65.55 | 0.0 | 563 |
LLPS-Coo-1113 | Colletotrichum orbiculare | 65.54 | 0.0 | 565 |
LLPS-Asc-1674 | Aspergillus clavatus | 65.53 | 0.0 | 551 |
LLPS-Ved-0383 | Verticillium dahliae | 65.39 | 0.0 | 561 |
LLPS-Gag-0022 | Gaeumannomyces graminis | 65.37 | 0.0 | 558 |
LLPS-Drm-2041 | Drosophila melanogaster | 65.35 | 0.0 | 565 |
LLPS-Pytr-0904 | Pyrenophora triticirepentis | 65.12 | 0.0 | 551 |
LLPS-Pyt-0249 | Pyrenophora teres | 65.12 | 0.0 | 551 |
LLPS-Nef-1424 | Neosartorya fischeri | 65.04 | 0.0 | 548 |
LLPS-Ast-1386 | Aspergillus terreus | 64.95 | 4e-168 | 489 |
LLPS-Mel-0810 | Melampsora laricipopulina | 64.83 | 0.0 | 521 |
LLPS-Usm-0378 | Ustilago maydis | 64.48 | 0.0 | 573 |
LLPS-Kop-0353 | Komagataella pastoris | 64.39 | 0.0 | 555 |
LLPS-Scp-1427 | Schizosaccharomyces pombe | 64.3 | 0.0 | 564 |
LLPS-Asg-1267 | Ashbya gossypii | 64.16 | 0.0 | 559 |
LLPS-Sac-1510 | Saccharomyces cerevisiae | 64.13 | 0.0 | 546 |
LLPS-Fuo-0792 | Fusarium oxysporum | 63.95 | 0.0 | 573 |
LLPS-Fuv-1123 | Fusarium verticillioides | 63.95 | 0.0 | 573 |
LLPS-Spr-0350 | Sporisorium reilianum | 63.53 | 0.0 | 570 |
LLPS-Dos-0038 | Dothistroma septosporum | 63.44 | 0.0 | 558 |
LLPS-Tum-1230 | Tuber melanosporum | 63.41 | 0.0 | 546 |
LLPS-Zyt-0366 | Zymoseptoria tritici | 63.21 | 0.0 | 552 |
LLPS-Mao-0355 | Magnaporthe oryzae | 62.98 | 0.0 | 549 |
LLPS-Put-1186 | Puccinia triticina | 62.65 | 0.0 | 525 |
LLPS-Scj-1583 | Schizosaccharomyces japonicus | 62.44 | 0.0 | 569 |
LLPS-Map-1037 | Magnaporthe poae | 62.41 | 0.0 | 561 |
LLPS-Scc-0485 | Schizosaccharomyces cryophilus | 62.29 | 0.0 | 537 |
LLPS-Fus-0022 | Fusarium solani | 62.11 | 0.0 | 561 |
LLPS-Lem-1010 | Leptosphaeria maculans | 60.93 | 0.0 | 553 |
LLPS-Gas-0858 | Galdieria sulphuraria | 60.47 | 0.0 | 541 |
LLPS-Chc-0474 | Chondrus crispus | 60.1 | 6e-178 | 513 |
LLPS-Phn-1175 | Phaeosphaeria nodorum | 59.31 | 3e-164 | 475 |
LLPS-Cym-0162 | Cyanidioschyzon merolae | 58.64 | 0.0 | 529 |