LLPS-Pytr-0257
PTRG_10813
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | 60S ribosome subunit biogenesis protein NIP7 |
Gene Name: | PTRG_10813 |
Ensembl Gene: | PTRG_10813 |
Ensembl Protein: | EDU43863 |
Organism: | Pyrenophora triticirepentis |
Taxa ID: | 426418 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ FUNCTION
Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | EDU43863 | EDU43863 |
UniProt | B2WLF3, B2WLF3_PYRTR | |
GeneBank | DS231629 | EDU43863.1 |
RefSeq | XM_001941109.1 | XP_001941144.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MRPLTEPETK VLFEKLATYC GKGISNLIAD PTGGNDRNVF RVQGSRCYYV RESLANLATS 60 61 VARDNLLSLG ICLGKFTKTG KFRLHITALS VIAPHARYKV WVKQNGEMPF LYGGNVLKAH 120 121 VGRWSEDCPE HQGVVVLSMN DTPLGFGVSA RSTAEARKLD PTGIVTFRQA DIGEYLREED 180 181 TLFTT 185 |
Nucleotide CDS Sequence (FASTA) |
1 ATGCGTCCCC TCACAGAACC AGAGACTAAA GTCCTCTTCG AGAAACTCGC TACATACTGC 60 61 GGAAAAGGTA TATCGAACCT CATTGCCGAC CCAACTGGCG GCAACGATCG CAATGTCTTC 120 121 CGCGTACAGG GCTCCCGCTG CTACTACGTG CGCGAATCCC TCGCCAACCT CGCCACAAGC 180 181 GTCGCCCGCG ACAACCTCCT CAGTCTAGGA ATCTGCCTGG GGAAATTCAC AAAAACAGGA 240 241 AAATTCCGCC TCCATATCAC CGCGCTCAGT GTAATCGCCC CGCACGCCCG CTACAAGGTC 300 301 TGGGTTAAGC AGAATGGCGA GATGCCATTT TTGTACGGCG GCAATGTGTT GAAGGCGCAC 360 361 GTGGGGAGGT GGAGCGAGGA CTGTCCTGAA CATCAGGGTG TTGTGGTGTT GAGTATGAAT 420 421 GATACACCGC TGGGATTCGG AGTAAGTGCG AGATCGACGG CTGAGGCGCG CAAGTTGGAT 480 481 CCTACGGGTA TTGTGACGTT TAGACAAGCG GATATTGGCG AGTATCTGAG AGAGGAAGAT 540 541 ACCTTGTTTA CGACTTGA 558 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Nucleus | |
Cellular Component | Preribosome, large subunit precursor | |
Molecular Function | RNA binding | |
Biological Process | Assembly of large subunit precursor of preribosome | |
Biological Process | Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
Biological Process | Ribosome assembly |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Pyt-0287 | Pyrenophora teres | 99.46 | 1e-135 | 384 |
LLPS-Lem-0367 | Leptosphaeria maculans | 95.68 | 4e-132 | 375 |
LLPS-Phn-0010 | Phaeosphaeria nodorum | 95.14 | 5e-131 | 372 |
LLPS-Zyt-1010 | Zymoseptoria tritici | 79.79 | 3e-108 | 315 |
LLPS-Dos-0268 | Dothistroma septosporum | 79.47 | 3e-109 | 317 |
LLPS-Blg-1127 | Blumeria graminis | 76.47 | 1e-101 | 298 |
LLPS-Beb-0473 | Beauveria bassiana | 76.47 | 1e-102 | 301 |
LLPS-Fus-0002 | Fusarium solani | 74.87 | 4e-100 | 294 |
LLPS-Fuv-0556 | Fusarium verticillioides | 74.33 | 3e-99 | 291 |
LLPS-Fuo-0182 | Fusarium oxysporum | 74.33 | 3e-99 | 291 |
LLPS-Aso-0127 | Aspergillus oryzae | 74.05 | 2e-101 | 297 |
LLPS-Cogr-0183 | Colletotrichum graminicola | 73.51 | 2e-98 | 290 |
LLPS-Tum-0731 | Tuber melanosporum | 73.22 | 3e-93 | 276 |
LLPS-Cog-0280 | Colletotrichum gloeosporioides | 72.73 | 2e-99 | 292 |
LLPS-Nec-0519 | Neurospora crassa | 72.68 | 3e-92 | 274 |
LLPS-Coo-0325 | Colletotrichum orbiculare | 72.19 | 6e-98 | 288 |
LLPS-Trv-0523 | Trichoderma virens | 70.81 | 7e-96 | 283 |
LLPS-Asfu-1145 | Aspergillus fumigatus | 70.39 | 6e-90 | 268 |
LLPS-Asg-0229 | Ashbya gossypii | 70.11 | 4e-90 | 268 |
LLPS-Nef-0549 | Neosartorya fischeri | 69.83 | 1e-88 | 265 |
LLPS-Trr-0459 | Trichoderma reesei | 69.73 | 4e-95 | 281 |
LLPS-Kop-0139 | Komagataella pastoris | 69.02 | 5e-89 | 266 |
LLPS-Sac-0336 | Saccharomyces cerevisiae | 69.02 | 7e-90 | 268 |
LLPS-Scc-0309 | Schizosaccharomyces cryophilus | 68.85 | 1e-89 | 267 |
LLPS-Scp-0415 | Schizosaccharomyces pombe | 68.85 | 2e-89 | 266 |
LLPS-Map-0095 | Magnaporthe poae | 68.11 | 1e-92 | 275 |
LLPS-Scj-0739 | Schizosaccharomyces japonicus | 67.21 | 4e-89 | 266 |
LLPS-Anp-2182 | Anas platyrhynchos | 66.67 | 5e-17 | 76.6 |
LLPS-Gag-1123 | Gaeumannomyces graminis | 66.49 | 6e-91 | 271 |
LLPS-Mao-0002 | Magnaporthe oryzae | 66.49 | 2e-90 | 270 |
LLPS-Yal-0537 | Yarrowia lipolytica | 65.57 | 1e-86 | 259 |
LLPS-Asn-0595 | Aspergillus nidulans | 65.24 | 2e-85 | 256 |
LLPS-Spr-0691 | Sporisorium reilianum | 65.03 | 6e-84 | 253 |
LLPS-Usm-0828 | Ustilago maydis | 65.03 | 1e-84 | 254 |
LLPS-Asc-0126 | Aspergillus clavatus | 64.73 | 2e-91 | 273 |
LLPS-Miv-0249 | Microbotryum violaceum | 63.93 | 4e-83 | 251 |
LLPS-Ast-0336 | Aspergillus terreus | 62.9 | 3e-78 | 238 |
LLPS-Ved-0018 | Verticillium dahliae | 62.16 | 7e-82 | 248 |
LLPS-Crn-0294 | Cryptococcus neoformans | 60.66 | 7e-77 | 234 |
LLPS-Mel-0464 | Melampsora laricipopulina | 60.66 | 3e-78 | 238 |
LLPS-Abg-1377 | Absidia glauca | 60.11 | 1e-77 | 236 |
LLPS-Leo-1131 | Lepisosteus oculatus | 58.79 | 1e-72 | 224 |
LLPS-Anc-0289 | Anolis carolinensis | 58.79 | 4e-72 | 222 |
LLPS-Xet-2171 | Xenopus tropicalis | 58.79 | 1e-72 | 224 |
LLPS-Cii-0391 | Ciona intestinalis | 58.24 | 3e-73 | 225 |
LLPS-Cis-0629 | Ciona savignyi | 57.14 | 5e-72 | 222 |
LLPS-Lac-0186 | Latimeria chalumnae | 57.14 | 6e-71 | 219 |
LLPS-Sot-1651 | Solanum tuberosum | 56.68 | 1e-67 | 211 |
LLPS-Ere-0297 | Erinaceus europaeus | 56.59 | 1e-69 | 216 |
LLPS-Dar-1496 | Danio rerio | 56.59 | 3e-70 | 218 |
LLPS-Mod-1972 | Monodelphis domestica | 56.59 | 2e-69 | 216 |
LLPS-Pes-0367 | Pelodiscus sinensis | 56.17 | 3e-58 | 186 |
LLPS-Sol-0613 | Solanum lycopersicum | 56.15 | 1e-66 | 209 |
LLPS-Sus-1387 | Sus scrofa | 56.04 | 2e-69 | 216 |
LLPS-Mum-0949 | Mus musculus | 56.04 | 5e-69 | 214 |
LLPS-Dio-1796 | Dipodomys ordii | 56.04 | 2e-69 | 216 |
LLPS-Scf-1224 | Scleropages formosus | 56.04 | 2e-69 | 216 |
LLPS-Bot-0035 | Bos taurus | 56.04 | 2e-69 | 215 |
LLPS-Xim-0948 | Xiphophorus maculatus | 56.04 | 2e-69 | 216 |
LLPS-Tut-0800 | Tursiops truncatus | 56.04 | 3e-69 | 215 |
LLPS-Ova-2467 | Ovis aries | 56.04 | 3e-69 | 215 |
LLPS-Myl-0984 | Myotis lucifugus | 56.04 | 3e-69 | 215 |
LLPS-Aim-1822 | Ailuropoda melanoleuca | 56.04 | 9e-69 | 214 |
LLPS-Chr-0250 | Chlamydomonas reinhardtii | 56.04 | 5e-68 | 212 |
LLPS-Urm-0706 | Ursus maritimus | 56.04 | 7e-69 | 214 |
LLPS-Fec-1258 | Felis catus | 56.04 | 9e-69 | 214 |
LLPS-Cap-1379 | Cavia porcellus | 56.04 | 8e-70 | 216 |
LLPS-Eqc-1993 | Equus caballus | 56.04 | 2e-69 | 215 |
LLPS-Ict-3673 | Ictidomys tridecemlineatus | 56.04 | 3e-69 | 215 |
LLPS-Gaga-0576 | Gallus gallus | 56.04 | 4e-67 | 210 |
LLPS-Orl-0988 | Oryzias latipes | 55.49 | 2e-68 | 213 |
LLPS-Aon-0118 | Aotus nancymaae | 55.49 | 3e-69 | 215 |
LLPS-Mea-0751 | Mesocricetus auratus | 55.49 | 7e-69 | 214 |
LLPS-Chs-0037 | Chlorocebus sabaeus | 55.49 | 5e-69 | 214 |
LLPS-Caj-0438 | Callithrix jacchus | 55.49 | 3e-69 | 215 |
LLPS-Gog-0913 | Gorilla gorilla | 55.49 | 4e-69 | 215 |
LLPS-Ran-1536 | Rattus norvegicus | 55.49 | 4e-69 | 215 |
LLPS-Hos-0738 | Homo sapiens | 55.49 | 4e-69 | 215 |
LLPS-Pap-1760 | Pan paniscus | 55.49 | 4e-69 | 215 |
LLPS-Pat-0442 | Pan troglodytes | 55.49 | 4e-69 | 215 |
LLPS-Pof-1102 | Poecilia formosa | 55.49 | 7e-69 | 214 |
LLPS-Orc-1093 | Oryctolagus cuniculus | 55.49 | 4e-69 | 215 |
LLPS-Orn-1011 | Oreochromis niloticus | 55.49 | 3e-68 | 213 |
LLPS-Ten-1808 | Tetraodon nigroviridis | 55.49 | 3e-69 | 215 |
LLPS-Poa-0050 | Pongo abelii | 55.49 | 4e-69 | 215 |
LLPS-Nol-0925 | Nomascus leucogenys | 55.49 | 2e-69 | 216 |
LLPS-Cas-2151 | Carlito syrichta | 55.49 | 8e-69 | 214 |
LLPS-Cea-0038 | Cercocebus atys | 54.95 | 8e-69 | 214 |
LLPS-Maf-1895 | Macaca fascicularis | 54.95 | 8e-69 | 214 |
LLPS-Fud-2607 | Fukomys damarensis | 54.95 | 9e-69 | 214 |
LLPS-Tar-1519 | Takifugu rubripes | 54.95 | 1e-68 | 214 |
LLPS-Paa-1506 | Papio anubis | 54.95 | 8e-69 | 214 |
LLPS-Mal-2069 | Mandrillus leucophaeus | 54.95 | 8e-69 | 214 |
LLPS-Loa-2047 | Loxodonta africana | 54.95 | 2e-68 | 213 |
LLPS-Caf-2024 | Canis familiaris | 54.95 | 2e-67 | 211 |
LLPS-Meg-1438 | Meleagris gallopavo | 54.94 | 3e-57 | 184 |
LLPS-Nia-0552 | Nicotiana attenuata | 54.55 | 2e-65 | 206 |
LLPS-Icp-1803 | Ictalurus punctatus | 54.4 | 7e-68 | 212 |
LLPS-Man-2622 | Macaca nemestrina | 54.4 | 4e-68 | 212 |
LLPS-Scm-1125 | Scophthalmus maximus | 54.4 | 7e-68 | 212 |
LLPS-Otg-0146 | Otolemur garnettii | 54.4 | 8e-68 | 211 |
LLPS-Tag-0317 | Taeniopygia guttata | 54.4 | 2e-63 | 200 |
LLPS-Fia-0184 | Ficedula albicollis | 53.7 | 1e-55 | 180 |
LLPS-Ora-0149 | Ornithorhynchus anatinus | 53.61 | 3e-28 | 107 |
LLPS-Gaa-0113 | Gasterosteus aculeatus | 53.09 | 8e-57 | 184 |
LLPS-Rhb-0348 | Rhinopithecus bieti | 52.87 | 3e-60 | 192 |
LLPS-Chc-0252 | Chondrus crispus | 52.49 | 7e-58 | 186 |
LLPS-Asm-0092 | Astyanax mexicanus | 52.08 | 3e-46 | 159 |
LLPS-Vir-1732 | Vigna radiata | 51.87 | 1e-61 | 196 |
LLPS-Met-0365 | Medicago truncatula | 51.87 | 5e-61 | 194 |
LLPS-Gas-0236 | Galdieria sulphuraria | 51.67 | 1e-60 | 193 |
LLPS-Mam-0842 | Macaca mulatta | 51.65 | 3e-61 | 194 |
LLPS-Php-0268 | Physcomitrella patens | 51.61 | 2e-64 | 203 |
LLPS-Viv-0618 | Vitis vinifera | 51.34 | 3e-61 | 195 |
LLPS-Mae-0349 | Manihot esculenta | 51.34 | 3e-60 | 192 |
LLPS-Phv-0034 | Phaseolus vulgaris | 51.34 | 6e-61 | 194 |
LLPS-Glm-0477 | Glycine max | 50.8 | 3e-60 | 192 |
LLPS-Via-0872 | Vigna angularis | 50.8 | 5e-61 | 194 |
LLPS-Cus-0432 | Cucumis sativus | 50.8 | 7e-61 | 194 |
LLPS-Cae-0812 | Caenorhabditis elegans | 50.54 | 2e-60 | 193 |
LLPS-Sem-0172 | Selaginella moellendorffii | 50.28 | 2e-62 | 198 |
LLPS-Brn-0192 | Brassica napus | 50.27 | 9e-61 | 194 |
LLPS-Prp-0736 | Prunus persica | 50.27 | 4e-59 | 189 |
LLPS-Bro-2281 | Brassica oleracea | 50.26 | 2e-61 | 195 |
LLPS-Dac-1327 | Daucus carota | 49.73 | 3e-58 | 187 |
LLPS-Brr-0093 | Brassica rapa | 49.73 | 1e-60 | 193 |
LLPS-Amt-0038 | Amborella trichopoda | 49.73 | 8e-61 | 194 |
LLPS-Hea-2004 | Helianthus annuus | 49.2 | 4e-60 | 192 |
LLPS-Osl-0715 | Ostreococcus lucimarinus | 48.91 | 7e-58 | 186 |
LLPS-Arl-0347 | Arabidopsis lyrata | 48.66 | 7e-60 | 191 |
LLPS-Art-0069 | Arabidopsis thaliana | 48.66 | 4e-59 | 189 |
LLPS-Gor-0469 | Gossypium raimondii | 48.65 | 7e-55 | 179 |
LLPS-Coc-0479 | Corchorus capsularis | 48.65 | 1e-56 | 184 |
LLPS-Thc-0533 | Theobroma cacao | 48.11 | 5e-56 | 182 |
LLPS-Drm-0316 | Drosophila melanogaster | 48.09 | 2e-55 | 180 |
LLPS-Tru-0160 | Triticum urartu | 47.37 | 4e-16 | 77.4 |
LLPS-Pot-0068 | Populus trichocarpa | 47.06 | 8e-55 | 178 |
LLPS-Cym-0102 | Cyanidioschyzon merolae | 46.7 | 5e-51 | 169 |
LLPS-Orbr-0174 | Oryza brachyantha | 45.37 | 8e-26 | 106 |
LLPS-Sei-0548 | Setaria italica | 44.68 | 2e-47 | 160 |
LLPS-Brd-0150 | Brachypodium distachyon | 43.62 | 1e-45 | 155 |
LLPS-Sob-0695 | Sorghum bicolor | 43.62 | 4e-46 | 156 |
LLPS-Ori-0816 | Oryza indica | 43.16 | 7e-47 | 158 |
LLPS-Orni-0332 | Oryza nivara | 43.16 | 7e-47 | 158 |
LLPS-Ors-0379 | Oryza sativa | 43.16 | 7e-47 | 158 |
LLPS-Orm-0484 | Oryza meridionalis | 43.16 | 7e-47 | 158 |
LLPS-Orr-0571 | Oryza rufipogon | 43.16 | 7e-47 | 158 |
LLPS-Org-0156 | Oryza glaberrima | 43.16 | 7e-47 | 158 |
LLPS-Hov-0760 | Hordeum vulgare | 43.09 | 6e-46 | 155 |
LLPS-Zem-0049 | Zea mays | 43.09 | 1e-45 | 155 |
LLPS-Lep-0746 | Leersia perrieri | 42.55 | 6e-46 | 155 |
LLPS-Tra-0246 | Triticum aestivum | 42.55 | 1e-45 | 155 |
LLPS-Orp-0623 | Oryza punctata | 42.55 | 2e-45 | 154 |
LLPS-Orb-0788 | Oryza barthii | 40.44 | 4e-39 | 137 |
LLPS-Mua-1629 | Musa acuminata | 37.65 | 2e-23 | 96.3 |