DrLLPS - Data resource of LLPS

LLPS-Org-0156

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	60S ribosome subunit biogenesis protein NIP7 homolog
Ensembl Gene:	ORGLA07G0201900
Ensembl Protein:	ORGLA07G0201900.1
Organism:	Oryza glaberrima
Taxa ID:	4538
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus, Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Bos taurus	LLPS-Bot-0035	E1BC14	Client	Nucleolus	53.48	4e-66	207
Saccharomyces cerevisiae	LLPS-Sac-0336	Q08962	Client	Nucleolus, Stress granule	40.43	3e-47	159
Mus musculus	LLPS-Mum-0949	Q9CXK8	Client	Nucleolus	53.48	5e-66	207
Homo sapiens	LLPS-Hos-0738	Q9Y221	Client	Nucleolus	53.48	3e-66	207
Arabidopsis thaliana	LLPS-Art-0069	Q6NM52	Client	Nucleolus	62.57	1e-84	254

▼ FUNCTION

Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ORGLA07G0201900.1	ORGLA07G0201900.1
UniProt		I1QD27, I1QD27_ORYGL

▼ SEQUENCE

Protein Sequence (FASTA)
1 MRALDEKETK MVFEKLFKFT GPNLKHLLER PAVEGPDPQA GRYCLRLHKN RVYYASEALV 60 61 RRATAVARPR LAGVGTPIGK FTHGGAFHLT VHALDLLAAH ARRRVWLKPD TERSFLFGNS 120 121 VPKSSLARIT ENTKANDGVV VMSMADVPLG FGIAARSAQD CRKADTNAVV VLHQSDAGEY 180 181 LRREEELM 188
Nucleotide CDS Sequence (FASTA)
1 ATGAGGGCGC TCGACGAGAA GGAGACGAAG ATGGTGTTCG AGAAGCTGTT CAAGTTCACG 60 61 GGGCCGAACC TGAAGCACCT CCTGGAGCGG CCGGCGGTGG AGGGGCCCGA CCCGCAGGCC 120 121 GGGCGCTACT GCCTCCGCCT CCACAAGAAC CGCGTCTACT ACGCCTCCGA GGCGCTCGTC 180 181 CGCCGCGCCA CCGCCGTCGC CCGCCCGCGC CTCGCCGGGG TCGGCACGCC CATCGGCAAG 240 241 TTCACCCACG GCGGCGCGTT CCACCTCACC GTCCACGCCC TCGACCTCCT CGCCGCCCAC 300 301 GCCCGCCGCC GCGTCTGGCT CAAGCCCGAC ACCGAGCGCT CCTTCCTCTT CGGCAACTCC 360 361 GTGCCCAAGT CCTCCCTCGC CCGCATCACC GAGAACACCA AGGCCAACGA CGGCGTCGTC 420 421 GTCATGTCCA TGGCCGACGT CCCGCTCGGC TTCGGCATCG CCGCCAGGTC GGCGCAGGAC 480 481 TGCAGGAAGG CCGACACCAA CGCCGTCGTT GTGCTGCACC AGTCTGACGC AGGCGAGTAC 540 541 CTCCGCCGGG AGGAGGAGCT CATGTGA 567

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0690	Ribosome biogenesis
KW-0694	RNA-binding

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005829	Cellular Component	Cytosol
GO:0005634	Cellular Component	Nucleus
GO:0003723	Molecular Function	RNA binding
GO:0042255	Biological Process	Ribosome assembly

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Ori-0816	Oryza indica	100.0	2e-121	348
LLPS-Orni-0332	Oryza nivara	100.0	2e-121	348
LLPS-Orr-0571	Oryza rufipogon	100.0	2e-121	348
LLPS-Orm-0484	Oryza meridionalis	100.0	2e-121	348
LLPS-Ors-0379	Oryza sativa	100.0	2e-121	348
LLPS-Orp-0623	Oryza punctata	98.4	1e-119	344
LLPS-Lep-0746	Leersia perrieri	97.87	5e-119	342
LLPS-Zem-0049	Zea mays	94.15	1e-112	326
LLPS-Sei-0548	Setaria italica	93.62	2e-112	325
LLPS-Sob-0695	Sorghum bicolor	93.09	1e-111	323
LLPS-Brd-0150	Brachypodium distachyon	92.02	2e-111	323
LLPS-Tra-0246	Triticum aestivum	91.49	2e-111	323
LLPS-Tru-0160	Triticum urartu	91.25	2e-45	155
LLPS-Hov-0760	Hordeum vulgare	89.89	5e-110	319
LLPS-Orb-0788	Oryza barthii	85.11	7e-93	275
LLPS-Orbr-0174	Oryza brachyantha	71.08	5e-54	181
LLPS-Via-0872	Vigna angularis	69.52	1e-84	255
LLPS-Phv-0034	Phaseolus vulgaris	69.52	2e-84	254
LLPS-Vir-1732	Vigna radiata	68.98	3e-84	254
LLPS-Amt-0038	Amborella trichopoda	68.45	2e-81	246
LLPS-Anp-2182	Anas platyrhynchos	68.0	3e-17	77.4
LLPS-Viv-2332	Vitis vinifera	67.91	3e-82	248
LLPS-Met-0365	Medicago truncatula	67.38	2e-81	246
LLPS-Thc-0533	Theobroma cacao	67.2	9e-81	245
LLPS-Glm-0477	Glycine max	66.84	4e-81	246
LLPS-Cus-0432	Cucumis sativus	66.31	6e-80	243
LLPS-Prp-0736	Prunus persica	66.31	3e-82	249
LLPS-Mae-0349	Manihot esculenta	65.78	2e-78	239
LLPS-Hea-1757	Helianthus annuus	65.24	2e-77	236
LLPS-Coc-0479	Corchorus capsularis	64.52	5e-77	235
LLPS-Gor-0469	Gossypium raimondii	64.52	2e-78	239
LLPS-Dac-1327	Daucus carota	64.17	1e-77	237
LLPS-Brn-1866	Brassica napus	63.64	6e-77	235
LLPS-Bro-0985	Brassica oleracea	63.64	2e-76	234
LLPS-Brr-0502	Brassica rapa	63.64	6e-77	235
LLPS-Nia-0552	Nicotiana attenuata	63.64	1e-74	229
LLPS-Sol-0613	Solanum lycopersicum	63.1	7e-73	225
LLPS-Php-0268	Physcomitrella patens	63.1	5e-71	220
LLPS-Sot-1651	Solanum tuberosum	62.57	3e-73	226
LLPS-Arl-0347	Arabidopsis lyrata	62.57	1e-74	229
LLPS-Art-0069	Arabidopsis thaliana	62.57	1e-74	229
LLPS-Pot-0068	Populus trichocarpa	61.5	1e-73	226
LLPS-Mua-1629	Musa acuminata	60.37	4e-55	178
LLPS-Sem-0172	Selaginella moellendorffii	58.29	2e-65	206
LLPS-Chr-0250	Chlamydomonas reinhardtii	55.61	4e-63	199
LLPS-Pes-0367	Pelodiscus sinensis	55.09	2e-50	167
LLPS-Cap-1379	Cavia porcellus	54.55	4e-59	189
LLPS-Anc-0289	Anolis carolinensis	54.55	9e-59	188
LLPS-Xet-2171	Xenopus tropicalis	54.55	2e-59	190
LLPS-Gaga-0576	Gallus gallus	54.55	1e-58	188
LLPS-Orn-1011	Oreochromis niloticus	54.55	4e-59	189
LLPS-Scf-1224	Scleropages formosus	54.01	1e-59	191
LLPS-Ova-2467	Ovis aries	54.01	2e-59	190
LLPS-Ran-1536	Rattus norvegicus	54.01	1e-58	188
LLPS-Aon-0118	Aotus nancymaae	54.01	1e-58	188
LLPS-Caj-0438	Callithrix jacchus	54.01	1e-58	188
LLPS-Ten-1808	Tetraodon nigroviridis	54.01	2e-59	190
LLPS-Dar-1496	Danio rerio	54.01	9e-60	191
LLPS-Lac-0186	Latimeria chalumnae	54.01	2e-59	190
LLPS-Meg-1438	Meleagris gallopavo	53.89	7e-51	167
LLPS-Fia-0184	Ficedula albicollis	53.89	1e-49	164
LLPS-Dio-1796	Dipodomys ordii	53.48	2e-58	188
LLPS-Bot-0035	Bos taurus	53.48	1e-58	188
LLPS-Xim-0948	Xiphophorus maculatus	53.48	3e-58	187
LLPS-Tar-1519	Takifugu rubripes	53.48	5e-59	189
LLPS-Paa-1506	Papio anubis	53.48	1e-58	188
LLPS-Mal-2069	Mandrillus leucophaeus	53.48	1e-58	188
LLPS-Aim-1822	Ailuropoda melanoleuca	53.48	3e-58	187
LLPS-Ere-0297	Erinaceus europaeus	53.48	6e-59	189
LLPS-Cea-0038	Cercocebus atys	53.48	1e-58	188
LLPS-Mum-0949	Mus musculus	53.48	2e-58	187
LLPS-Maf-1895	Macaca fascicularis	53.48	1e-58	188
LLPS-Mea-0751	Mesocricetus auratus	53.48	2e-58	188
LLPS-Chs-0037	Chlorocebus sabaeus	53.48	2e-58	187
LLPS-Icp-1803	Ictalurus punctatus	53.48	1e-59	191
LLPS-Gog-0913	Gorilla gorilla	53.48	2e-58	187
LLPS-Caf-2024	Canis familiaris	53.48	9e-58	186
LLPS-Poa-0050	Pongo abelii	53.48	2e-58	187
LLPS-Tag-0317	Taeniopygia guttata	53.48	1e-54	178
LLPS-Man-2622	Macaca nemestrina	53.48	2e-58	187
LLPS-Hos-0738	Homo sapiens	53.48	2e-58	187
LLPS-Pap-1760	Pan paniscus	53.48	2e-58	187
LLPS-Urm-0706	Ursus maritimus	53.48	4e-58	187
LLPS-Pat-0442	Pan troglodytes	53.48	2e-58	187
LLPS-Fec-1258	Felis catus	53.48	3e-58	187
LLPS-Otg-0146	Otolemur garnettii	53.48	3e-58	187
LLPS-Chc-0252	Chondrus crispus	52.97	8e-55	178
LLPS-Tut-0800	Tursiops truncatus	52.94	2e-58	188
LLPS-Myl-0984	Myotis lucifugus	52.94	2e-58	188
LLPS-Orl-0988	Oryzias latipes	52.94	5e-57	184
LLPS-Sus-1387	Sus scrofa	52.94	2e-58	187
LLPS-Eqc-1993	Equus caballus	52.94	2e-58	187
LLPS-Ict-3673	Ictidomys tridecemlineatus	52.94	2e-58	188
LLPS-Cas-2151	Carlito syrichta	52.94	3e-58	187
LLPS-Pof-1102	Poecilia formosa	52.94	1e-57	186
LLPS-Orc-1093	Oryctolagus cuniculus	52.94	2e-58	188
LLPS-Leo-1131	Lepisosteus oculatus	52.41	2e-57	185
LLPS-Fud-2607	Fukomys damarensis	52.41	2e-58	187
LLPS-Loa-2047	Loxodonta africana	52.41	2e-58	187
LLPS-Scm-1125	Scophthalmus maximus	52.41	3e-58	187
LLPS-Mod-1972	Monodelphis domestica	52.13	2e-58	187
LLPS-Osl-0715	Ostreococcus lucimarinus	51.6	8e-54	176
LLPS-Cis-0629	Ciona savignyi	51.34	2e-54	177
LLPS-Nol-0925	Nomascus leucogenys	51.34	2e-55	180
LLPS-Gaa-0113	Gasterosteus aculeatus	50.9	5e-47	158
LLPS-Cae-0812	Caenorhabditis elegans	50.27	5e-52	171
LLPS-Cii-0391	Ciona intestinalis	49.73	5e-54	176
LLPS-Crn-0294	Cryptococcus neoformans	49.47	4e-53	174
LLPS-Mel-0464	Melampsora laricipopulina	49.47	5e-53	174
LLPS-Spr-0691	Sporisorium reilianum	49.47	7e-50	166
LLPS-Usm-0828	Ustilago maydis	49.47	2e-51	170
LLPS-Mam-0842	Macaca mulatta	49.2	3e-51	169
LLPS-Cym-0102	Cyanidioschyzon merolae	48.13	1e-46	157
LLPS-Rhb-0348	Rhinopithecus bieti	48.04	4e-46	155
LLPS-Abg-1377	Absidia glauca	47.34	2e-51	170
LLPS-Miv-0249	Microbotryum violaceum	46.81	1e-46	157
LLPS-Scp-0415	Schizosaccharomyces pombe	46.28	6e-47	158
LLPS-Scj-0739	Schizosaccharomyces japonicus	46.28	1e-49	165
LLPS-Tum-0731	Tuber melanosporum	46.28	1e-46	157
LLPS-Dos-0268	Dothistroma septosporum	46.28	1e-43	150
LLPS-Zyt-1010	Zymoseptoria tritici	45.74	2e-43	149
LLPS-Gas-0236	Galdieria sulphuraria	45.74	2e-50	167
LLPS-Aso-0127	Aspergillus oryzae	45.21	9e-41	142
LLPS-Lem-0367	Leptosphaeria maculans	45.21	5e-40	140
LLPS-Drm-0316	Drosophila melanogaster	45.21	6e-50	166
LLPS-Blg-1127	Blumeria graminis	44.68	5e-43	148
LLPS-Yal-0537	Yarrowia lipolytica	44.68	1e-42	147
LLPS-Scc-0309	Schizosaccharomyces cryophilus	44.68	5e-46	156
LLPS-Asm-0092	Astyanax mexicanus	44.62	1e-37	136
LLPS-Coo-0325	Colletotrichum orbiculare	44.15	7e-42	145
LLPS-Cogr-0183	Colletotrichum graminicola	44.15	2e-42	147
LLPS-Beb-0473	Beauveria bassiana	44.15	3e-41	144
LLPS-Cog-0280	Colletotrichum gloeosporioides	44.15	1e-41	144
LLPS-Fus-0002	Fusarium solani	43.62	4e-41	143
LLPS-Pytr-0257	Pyrenophora triticirepentis	43.16	7e-39	137
LLPS-Phn-0010	Phaeosphaeria nodorum	43.16	3e-39	138
LLPS-Kop-0139	Komagataella pastoris	43.09	3e-42	146
LLPS-Fuv-0556	Fusarium verticillioides	43.09	3e-41	144
LLPS-Asg-0229	Ashbya gossypii	43.09	6e-42	145
LLPS-Fuo-0182	Fusarium oxysporum	43.09	3e-41	144
LLPS-Pyt-0287	Pyrenophora teres	42.63	4e-38	135
LLPS-Nec-0519	Neurospora crassa	42.55	5e-37	132
LLPS-Ora-0149	Ornithorhynchus anatinus	42.53	3e-16	75.9
LLPS-Asn-0595	Aspergillus nidulans	42.02	1e-38	137
LLPS-Gag-1123	Gaeumannomyces graminis	41.49	1e-39	140
LLPS-Mao-0002	Magnaporthe oryzae	41.49	1e-39	139
LLPS-Trv-0523	Trichoderma virens	41.49	7e-39	137
LLPS-Ved-0018	Verticillium dahliae	41.49	5e-39	138
LLPS-Sac-0336	Saccharomyces cerevisiae	40.96	2e-40	141
LLPS-Asfu-1145	Aspergillus fumigatus	40.66	4e-33	122
LLPS-Nef-0549	Neosartorya fischeri	40.66	7e-33	122
LLPS-Map-0095	Magnaporthe poae	40.43	1e-39	139
LLPS-Trr-0459	Trichoderma reesei	40.43	3e-38	135
LLPS-Ast-0336	Aspergillus terreus	38.62	2e-28	110
LLPS-Asc-0126	Aspergillus clavatus	33.01	7e-30	114

LLPS-Org-0156

Protein Sequence

Nucleotide Sequence