LLPS-Pot-2250
POPTR_008G182300
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | T-complex protein 1 subunit epsilon |
Gene Name: | POPTR_008G182300 |
Ensembl Gene: | POPTR_008G182300v3 |
Ensembl Protein: | PNT25373 |
Organism: | Populus trichocarpa |
Taxa ID: | 3694 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, Others | Predicted from orthologs | (View) |
▼ FUNCTION
Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | PNT25373 | PNT25373 |
Ensembl | PNT25374 | PNT25374 |
Ensembl | PNT25375 | PNT25375 |
UniProt | B9HLC9, B9HLC9_POPTR | |
GeneBank | CM009297 | PNT25373.1 |
RefSeq | XM_002312615.2 | XP_002312651.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MALAFDEFGR PFVIIKEQDQ KVRLRGLDAQ KANIASGMAV SRILRTSLGP KGMDKMLQSP 60 61 DGDVTITNDG ATILEQMDVD NQIAKLLVEL SRSQDYEIGD GTTGVVVLAG ALLEQSQKLL 120 121 ERGIHPIRVA EGYETASRIA VEHLEKISQK YDFGVNNMEP LVQTCMTTLS SKIVNRCKRS 180 181 LAEISVKAVL AVADLERKDV NLDLIKVEGK VGGKLEDTEL IYGILVDKEM SHPQMPKQIE 240 241 DAKIAILTCP FEPPKPKTKH KVDIDTVEKF QTLRKQEQQY FDVMVQKCKD VGATLVICQW 300 301 GFDDEANHLL MHRNLPAVRW VGGVELELIA IATGGRIVPR FQELTPEKLG KAGLVREKAF 360 361 GTTKDRMLYV EHCANSRAVT IFIRGGNKMI IEETKRSIHD ALCVARNLIR NNSIVYGGGS 420 421 AEISCSVAVE AAADRYPGVE QYAIRAFADA LDSVPMALAE NSGLQPIETL SAVKSQQIKE 480 481 NNHYCGIDCN DAGTNDMREQ NVFETLIGKQ QQIFLATQVV KMILKIDDVI SPSEY 535 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGTTAG CGTTCGATGA ATTCGGTAGA CCATTTGTAA TAATAAAAGA ACAAGACCAG 60 61 AAGGTTCGAT TGAGAGGTCT CGATGCTCAA AAAGCCAACA TTGCTTCTGG TATGGCCGTC 120 121 TCTCGCATCC TTCGCACCTC TCTCGGTCCC AAAGGTATGG ATAAGATGCT CCAGAGTCCC 180 181 GACGGCGACG TCACCATCAC AAATGATGGT GCTACGATAT TGGAGCAAAT GGATGTGGAC 240 241 AATCAGATTG CAAAACTGTT GGTTGAGCTT TCGAGGAGTC AGGATTATGA AATCGGTGAT 300 301 GGGACTACTG GTGTTGTTGT TTTGGCTGGT GCTCTTTTAG AGCAGTCTCA GAAGCTTTTG 360 361 GAGCGCGGGA TTCACCCTAT TCGTGTTGCT GAGGGTTATG AGACTGCTTC TAGAATTGCT 420 421 GTGGAGCATT TGGAGAAGAT CTCTCAGAAG TATGATTTTG GAGTTAATAA TATGGAGCCC 480 481 TTGGTTCAAA CTTGCATGAC TACTTTGTCC TCCAAAATTG TGAATCGGTG CAAGCGCAGT 540 541 TTAGCAGAGA TTTCAGTTAA AGCAGTTCTT GCTGTTGCGG ATTTAGAGAG GAAAGATGTT 600 601 AATTTAGATT TGATAAAAGT TGAAGGGAAA GTAGGAGGCA AGTTGGAAGA TACTGAACTA 660 661 ATATATGGGA TACTTGTTGA CAAGGAAATG AGTCATCCGC AGATGCCAAA GCAAATTGAA 720 721 GATGCAAAAA TTGCTATCCT GACGTGCCCC TTTGAACCAC CTAAGCCAAA GACTAAACAT 780 781 AAGGTGGACA TTGATACAGT TGAAAAGTTT CAAACATTGC GCAAGCAAGA GCAGCAGTAC 840 841 TTTGATGTCA TGGTTCAGAA ATGCAAGGAT GTTGGCGCAA CCTTGGTTAT CTGTCAATGG 900 901 GGGTTTGATG ATGAGGCAAA TCATTTATTA ATGCACAGGA ACTTGCCTGC TGTCCGGTGG 960 961 GTTGGTGGTG TAGAGTTAGA GCTGATAGCA ATAGCTACAG GTGGAAGAAT TGTGCCAAGG 1020 1021 TTCCAGGAGT TGACACCTGA AAAGCTGGGA AAGGCTGGTT TGGTTCGAGA AAAGGCTTTT 1080 1081 GGCACAACCA AAGATAGAAT GCTGTATGTT GAACACTGTG CAAATTCGAG GGCTGTAACC 1140 1141 ATATTTATTC GTGGAGGTAA CAAAATGATA ATTGAGGAGA CAAAGCGTAG CATCCATGAT 1200 1201 GCGTTGTGTG TGGCAAGGAA TCTTATTCGC AACAACTCTA TTGTATATGG TGGTGGCTCA 1260 1261 GCTGAGATTT CCTGCTCAGT TGCTGTGGAG GCTGCAGCTG ATAGATATCC AGGAGTTGAG 1320 1321 CAGTATGCCA TCAGGGCATT TGCTGATGCT TTAGATTCTG TCCCTATGGC GCTAGCAGAA 1380 1381 AATAGCGGCC TCCAACCAAT TGAGACATTA TCTGCAGTGA AATCTCAGCA AATTAAGGAG 1440 1441 AACAATCATT ACTGCGGAAT AGATTGCAAT GATGCTGGTA CAAATGACAT GCGCGAGCAA 1500 1501 AACGTCTTTG AGACTCTTAT TGGAAAGCAG CAGCAGATTT TTCTTGCAAC ACAAGTTGTC 1560 1561 AAAATGATAT TAAAAATTGA TGATGTCATC TCTCCTTCCG AGTACTGA 1608 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chaperonin-containing T-complex | |
Molecular Function | ATP binding | |
Molecular Function | Unfolded protein binding | |
Biological Process | Protein folding |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sot-2002 | Solanum tuberosum | 93.87 | 2e-180 | 515 |
LLPS-Mae-2429 | Manihot esculenta | 93.46 | 0.0 | 1048 |
LLPS-Vir-2085 | Vigna radiata | 92.83 | 0.0 | 609 |
LLPS-Cus-1989 | Cucumis sativus | 92.34 | 0.0 | 1021 |
LLPS-Thc-1548 | Theobroma cacao | 91.96 | 0.0 | 1030 |
LLPS-Nia-0238 | Nicotiana attenuata | 91.59 | 0.0 | 1035 |
LLPS-Sol-0415 | Solanum lycopersicum | 91.4 | 0.0 | 1031 |
LLPS-Gor-0106 | Gossypium raimondii | 90.84 | 0.0 | 1020 |
LLPS-Org-1639 | Oryza glaberrima | 90.71 | 0.0 | 707 |
LLPS-Hea-0661 | Helianthus annuus | 90.65 | 0.0 | 1030 |
LLPS-Bro-0816 | Brassica oleracea | 90.47 | 0.0 | 1020 |
LLPS-Via-1472 | Vigna angularis | 90.47 | 0.0 | 1021 |
LLPS-Brn-1625 | Brassica napus | 90.47 | 0.0 | 1020 |
LLPS-Glm-1035 | Glycine max | 90.28 | 0.0 | 1020 |
LLPS-Prp-1545 | Prunus persica | 90.09 | 0.0 | 1019 |
LLPS-Phv-1211 | Phaseolus vulgaris | 90.09 | 0.0 | 1020 |
LLPS-Met-2137 | Medicago truncatula | 90.09 | 0.0 | 1013 |
LLPS-Brr-2005 | Brassica rapa | 89.91 | 0.0 | 1015 |
LLPS-Art-2810 | Arabidopsis thaliana | 89.72 | 0.0 | 1014 |
LLPS-Arl-2892 | Arabidopsis lyrata | 89.53 | 0.0 | 1013 |
LLPS-Orbr-2336 | Oryza brachyantha | 89.37 | 0.0 | 1011 |
LLPS-Orni-1166 | Oryza nivara | 89.35 | 0.0 | 1016 |
LLPS-Orgl-1116 | Oryza glumaepatula | 89.16 | 0.0 | 1014 |
LLPS-Sob-1795 | Sorghum bicolor | 88.97 | 0.0 | 1009 |
LLPS-Sei-0789 | Setaria italica | 88.97 | 0.0 | 1008 |
LLPS-Orr-0526 | Oryza rufipogon | 88.79 | 0.0 | 1006 |
LLPS-Ors-0679 | Oryza sativa | 88.79 | 0.0 | 1006 |
LLPS-Ori-1881 | Oryza indica | 88.79 | 0.0 | 1006 |
LLPS-Dac-2301 | Daucus carota | 88.79 | 0.0 | 1008 |
LLPS-Amt-0657 | Amborella trichopoda | 88.22 | 0.0 | 994 |
LLPS-Mua-1559 | Musa acuminata | 88.22 | 0.0 | 999 |
LLPS-Brd-2040 | Brachypodium distachyon | 87.85 | 0.0 | 991 |
LLPS-Tra-2332 | Triticum aestivum | 87.29 | 0.0 | 984 |
LLPS-Viv-2240 | Vitis vinifera | 86.95 | 0.0 | 971 |
LLPS-Zem-1631 | Zea mays | 86.31 | 0.0 | 999 |
LLPS-Sem-2251 | Selaginella moellendorffii | 84.11 | 0.0 | 956 |
LLPS-Php-2364 | Physcomitrella patens | 83.55 | 0.0 | 948 |
LLPS-Orp-0171 | Oryza punctata | 83.07 | 0.0 | 992 |
LLPS-Hov-1556 | Hordeum vulgare | 82.41 | 4e-173 | 498 |
LLPS-Tru-1501 | Triticum urartu | 80.75 | 0.0 | 891 |
LLPS-Osl-0343 | Ostreococcus lucimarinus | 73.41 | 0.0 | 858 |
LLPS-Chr-1722 | Chlamydomonas reinhardtii | 72.52 | 0.0 | 847 |
LLPS-Anp-2626 | Anas platyrhynchos | 70.91 | 0.0 | 556 |
LLPS-Xet-3933 | Xenopus tropicalis | 70.11 | 0.0 | 797 |
LLPS-Fia-2303 | Ficedula albicollis | 69.96 | 0.0 | 746 |
LLPS-Asm-2567 | Astyanax mexicanus | 69.74 | 0.0 | 793 |
LLPS-Icp-2007 | Ictalurus punctatus | 69.55 | 0.0 | 790 |
LLPS-Gaga-2446 | Gallus gallus | 69.36 | 0.0 | 794 |
LLPS-Orc-3909 | Oryctolagus cuniculus | 69.36 | 0.0 | 792 |
LLPS-Scf-1026 | Scleropages formosus | 69.36 | 0.0 | 794 |
LLPS-Tag-3237 | Taeniopygia guttata | 69.17 | 0.0 | 791 |
LLPS-Lac-3143 | Latimeria chalumnae | 69.17 | 0.0 | 782 |
LLPS-Dio-3844 | Dipodomys ordii | 69.17 | 0.0 | 787 |
LLPS-Mal-3371 | Mandrillus leucophaeus | 69.15 | 0.0 | 739 |
LLPS-Dar-1195 | Danio rerio | 68.98 | 0.0 | 784 |
LLPS-Fec-0996 | Felis catus | 68.98 | 0.0 | 788 |
LLPS-Eqc-4555 | Equus caballus | 68.8 | 0.0 | 788 |
LLPS-Ict-3752 | Ictidomys tridecemlineatus | 68.8 | 0.0 | 785 |
LLPS-Ova-0380 | Ovis aries | 68.8 | 0.0 | 784 |
LLPS-Leo-2140 | Lepisosteus oculatus | 68.8 | 0.0 | 791 |
LLPS-Chs-4721 | Chlorocebus sabaeus | 68.8 | 0.0 | 786 |
LLPS-Mam-0573 | Macaca mulatta | 68.61 | 0.0 | 785 |
LLPS-Man-3987 | Macaca nemestrina | 68.61 | 0.0 | 785 |
LLPS-Hos-0061 | Homo sapiens | 68.61 | 0.0 | 785 |
LLPS-Pat-3559 | Pan troglodytes | 68.61 | 0.0 | 785 |
LLPS-Pap-1287 | Pan paniscus | 68.61 | 0.0 | 785 |
LLPS-Rhb-2364 | Rhinopithecus bieti | 68.61 | 0.0 | 785 |
LLPS-Bot-4645 | Bos taurus | 68.61 | 0.0 | 784 |
LLPS-Paa-1749 | Papio anubis | 68.61 | 0.0 | 785 |
LLPS-Sus-3550 | Sus scrofa | 68.61 | 0.0 | 786 |
LLPS-Aon-4415 | Aotus nancymaae | 68.61 | 0.0 | 785 |
LLPS-Cea-1806 | Cercocebus atys | 68.61 | 0.0 | 785 |
LLPS-Maf-4546 | Macaca fascicularis | 68.61 | 0.0 | 785 |
LLPS-Mea-4326 | Mesocricetus auratus | 68.61 | 0.0 | 785 |
LLPS-Caj-4510 | Callithrix jacchus | 68.61 | 0.0 | 785 |
LLPS-Gog-0894 | Gorilla gorilla | 68.61 | 0.0 | 785 |
LLPS-Cap-1488 | Cavia porcellus | 68.42 | 0.0 | 781 |
LLPS-Cas-1033 | Carlito syrichta | 68.23 | 0.0 | 781 |
LLPS-Urm-0895 | Ursus maritimus | 68.23 | 0.0 | 783 |
LLPS-Orn-2557 | Oreochromis niloticus | 68.23 | 0.0 | 790 |
LLPS-Aim-3118 | Ailuropoda melanoleuca | 68.23 | 0.0 | 783 |
LLPS-Mup-1856 | Mustela putorius furo | 68.23 | 0.0 | 783 |
LLPS-Mum-3137 | Mus musculus | 68.23 | 0.0 | 777 |
LLPS-Chc-0555 | Chondrus crispus | 68.1 | 0.0 | 778 |
LLPS-Anc-1727 | Anolis carolinensis | 68.05 | 0.0 | 779 |
LLPS-Loa-4581 | Loxodonta africana | 68.05 | 0.0 | 779 |
LLPS-Mod-2713 | Monodelphis domestica | 68.05 | 0.0 | 780 |
LLPS-Pes-3661 | Pelodiscus sinensis | 68.05 | 0.0 | 780 |
LLPS-Ran-2298 | Rattus norvegicus | 68.05 | 0.0 | 776 |
LLPS-Fud-2439 | Fukomys damarensis | 68.05 | 0.0 | 776 |
LLPS-Ora-0647 | Ornithorhynchus anatinus | 67.98 | 0.0 | 780 |
LLPS-Caf-3585 | Canis familiaris | 67.86 | 0.0 | 773 |
LLPS-Orl-2258 | Oryzias latipes | 67.86 | 0.0 | 762 |
LLPS-Poa-1042 | Pongo abelii | 67.73 | 0.0 | 766 |
LLPS-Ten-1883 | Tetraodon nigroviridis | 67.67 | 0.0 | 783 |
LLPS-Xim-3131 | Xiphophorus maculatus | 67.67 | 0.0 | 785 |
LLPS-Sah-3716 | Sarcophilus harrisii | 67.54 | 0.0 | 767 |
LLPS-Pof-3360 | Poecilia formosa | 67.48 | 0.0 | 783 |
LLPS-Scm-2695 | Scophthalmus maximus | 67.29 | 0.0 | 782 |
LLPS-Gaa-2831 | Gasterosteus aculeatus | 67.11 | 0.0 | 774 |
LLPS-Myl-2982 | Myotis lucifugus | 67.11 | 0.0 | 773 |
LLPS-Meg-0985 | Meleagris gallopavo | 67.01 | 0.0 | 692 |
LLPS-Tar-1345 | Takifugu rubripes | 66.73 | 0.0 | 775 |
LLPS-Cii-0482 | Ciona intestinalis | 65.79 | 0.0 | 758 |
LLPS-Abg-1754 | Absidia glauca | 65.28 | 0.0 | 744 |
LLPS-Cis-1930 | Ciona savignyi | 64.47 | 0.0 | 742 |
LLPS-Cae-0389 | Caenorhabditis elegans | 64.1 | 0.0 | 724 |
LLPS-Scs-0031 | Sclerotinia sclerotiorum | 63.43 | 0.0 | 713 |
LLPS-Asc-0281 | Aspergillus clavatus | 63.43 | 0.0 | 718 |
LLPS-Asn-1274 | Aspergillus nidulans | 63.43 | 0.0 | 720 |
LLPS-Mel-1167 | Melampsora laricipopulina | 63.38 | 0.0 | 710 |
LLPS-Asfu-0689 | Aspergillus fumigatus | 63.13 | 0.0 | 702 |
LLPS-Ast-1060 | Aspergillus terreus | 63.13 | 0.0 | 706 |
LLPS-Miv-1554 | Microbotryum violaceum | 63.07 | 0.0 | 714 |
LLPS-Nef-0262 | Neosartorya fischeri | 63.05 | 0.0 | 714 |
LLPS-Put-0424 | Puccinia triticina | 63.0 | 0.0 | 712 |
LLPS-Asf-1333 | Aspergillus flavus | 62.96 | 0.0 | 713 |
LLPS-Zyt-0247 | Zymoseptoria tritici | 62.93 | 0.0 | 698 |
LLPS-Pytr-1537 | Pyrenophora triticirepentis | 62.86 | 0.0 | 711 |
LLPS-Aso-1067 | Aspergillus oryzae | 62.84 | 0.0 | 706 |
LLPS-Drm-1733 | Drosophila melanogaster | 62.78 | 0.0 | 726 |
LLPS-Crn-0491 | Cryptococcus neoformans | 62.78 | 0.0 | 698 |
LLPS-Pyt-0001 | Pyrenophora teres | 62.67 | 0.0 | 711 |
LLPS-Pug-0449 | Puccinia graminis | 62.62 | 0.0 | 707 |
LLPS-Blg-1124 | Blumeria graminis | 62.48 | 0.0 | 709 |
LLPS-Lem-0812 | Leptosphaeria maculans | 62.48 | 0.0 | 700 |
LLPS-Nol-0132 | Nomascus leucogenys | 62.41 | 0.0 | 686 |
LLPS-Map-0892 | Magnaporthe poae | 62.34 | 0.0 | 700 |
LLPS-Scp-0306 | Schizosaccharomyces pombe | 62.29 | 0.0 | 721 |
LLPS-Nec-1617 | Neurospora crassa | 62.24 | 0.0 | 697 |
LLPS-Gag-1540 | Gaeumannomyces graminis | 61.96 | 0.0 | 695 |
LLPS-Scj-1172 | Schizosaccharomyces japonicus | 61.9 | 0.0 | 723 |
LLPS-Usm-0948 | Ustilago maydis | 61.89 | 0.0 | 714 |
LLPS-Dos-1599 | Dothistroma septosporum | 61.79 | 0.0 | 694 |
LLPS-Tum-1483 | Tuber melanosporum | 61.71 | 0.0 | 711 |
LLPS-Trv-0168 | Trichoderma virens | 61.65 | 0.0 | 693 |
LLPS-Fus-0896 | Fusarium solani | 61.65 | 0.0 | 692 |
LLPS-Trr-0674 | Trichoderma reesei | 61.65 | 0.0 | 694 |
LLPS-Beb-1537 | Beauveria bassiana | 61.36 | 0.0 | 691 |
LLPS-Fuo-1272 | Fusarium oxysporum | 61.28 | 0.0 | 689 |
LLPS-Fuv-0115 | Fusarium verticillioides | 61.28 | 0.0 | 690 |
LLPS-Mao-0868 | Magnaporthe oryzae | 61.21 | 0.0 | 695 |
LLPS-Coo-1453 | Colletotrichum orbiculare | 61.09 | 0.0 | 695 |
LLPS-Cogr-0920 | Colletotrichum graminicola | 60.9 | 0.0 | 693 |
LLPS-Cog-1397 | Colletotrichum gloeosporioides | 60.8 | 0.0 | 692 |
LLPS-Ved-0975 | Verticillium dahliae | 60.71 | 0.0 | 691 |
LLPS-Asni-1495 | Aspergillus niger | 60.66 | 0.0 | 704 |
LLPS-Asg-0703 | Ashbya gossypii | 59.96 | 0.0 | 672 |
LLPS-Kop-1288 | Komagataella pastoris | 58.96 | 0.0 | 664 |
LLPS-Sac-1413 | Saccharomyces cerevisiae | 55.76 | 0.0 | 630 |
LLPS-Scc-0091 | Schizosaccharomyces cryophilus | 36.33 | 2e-99 | 317 |
LLPS-Gas-1016 | Galdieria sulphuraria | 35.95 | 2e-98 | 315 |