LLPS-Loa-1828
DDX39B
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | DExD-box helicase 39B |
Gene Name: | DDX39B |
Ensembl Gene: | ENSLAFG00000014202.3 |
Ensembl Protein: | ENSLAFP00000011893.3 |
Organism: | Loxodonta africana |
Taxa ID: | 9785 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Nucleolus, P-body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSLAFT00000014203.3 | ENSLAFP00000011893.3 |
Ensembl | ENSLAFT00000032751.1 | ENSLAFP00000021146.1 |
UniProt | G3TCS8, G3TCS8_LOXAF |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF LLKPELLRAI 60 61 VDCGFEHPSE VQHECIPQAI LGMDVLCQAK SGMGKTAVFV LATLQQLEPV TGQVSVLVMC 120 121 HTRELAFQIS KEYERFSKYM PNVKVAVFFG GLSIKKDEEV LKKNCPHIVV GTPGRILALA 180 181 RNKSLNLKHI KHFILDECDK MLEQLDMRRD VQEIFRMTPH EKQVMMFSAT LSKEIRPVCR 240 241 KFMQDPEIFV DDETKLTLHG LQQYYVKLKD NEKNRKLFDL LDVLEFNQVV IFVKSVQRCI 300 301 ALAQLLVEQN FPAIAIHRGM PQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIAFN 360 361 YDMPEDSDTY LHRVARAGRF GTKGLAITFV SDENDAKILN DVQDRFEVNI SELPDEIDIS 420 421 SYIEQTR 427 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCAGAGA ATGATGTGGA CAATGAGCTC TTGGACTATG AAGATGATGA GGTGGAGACA 60 61 GCAGCTGGAG GAGATGGGGC TGAGGCCCCT GCTAAGAAGG ATGTCAAAGG CTCCTACGTC 120 121 TCCATCCACA GCTCTGGCTT TCGTGACTTC CTGCTCAAGC CAGAGTTGCT TCGCGCCATT 180 181 GTTGACTGTG GTTTTGAGCA TCCATCAGAA GTCCAGCATG AGTGCATCCC TCAGGCCATT 240 241 CTGGGAATGG ATGTTCTGTG CCAGGCCAAG TCAGGCATGG GAAAGACAGC AGTGTTCGTG 300 301 CTGGCTACAC TGCAACAGCT CGAACCAGTT ACTGGACAGG TGTCTGTGCT GGTGATGTGT 360 361 CACACTCGGG AGTTGGCTTT CCAGATTAGC AAGGAGTATG AACGCTTCTC TAAATACATG 420 421 CCCAATGTCA AGGTCGCGGT GTTTTTCGGT GGTCTGTCTA TCAAGAAGGA TGAAGAGGTG 480 481 CTGAAGAAGA ACTGCCCGCA TATCGTCGTG GGGACACCTG GCCGCATCCT GGCCCTGGCT 540 541 CGAAATAAAA GCCTCAACCT CAAGCATATT AAACACTTTA TTTTGGATGA GTGTGATAAG 600 601 ATGCTTGAAC AGCTCGACAT GCGTCGGGAT GTCCAGGAAA TTTTTCGCAT GACCCCCCAT 660 661 GAGAAGCAGG TCATGATGTT CAGTGCTACC TTGAGCAAAG AGATCCGTCC AGTCTGCCGC 720 721 AAGTTCATGC AAGACGTAAA TAACCCAACG CGTGGCGTGC CTCCCTTCCC CCTCCCATGT 780 781 GTGTTG 786 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Man-1842 | Macaca nemestrina | 99.77 | 0.0 | 877 |
LLPS-Pat-2506 | Pan troglodytes | 99.77 | 0.0 | 877 |
LLPS-Pap-1115 | Pan paniscus | 99.77 | 0.0 | 877 |
LLPS-Hos-1151 | Homo sapiens | 99.77 | 0.0 | 877 |
LLPS-Mam-0022 | Macaca mulatta | 99.77 | 0.0 | 877 |
LLPS-Poa-0394 | Pongo abelii | 99.77 | 0.0 | 877 |
LLPS-Eqc-0932 | Equus caballus | 99.77 | 0.0 | 877 |
LLPS-Cas-0082 | Carlito syrichta | 99.77 | 0.0 | 877 |
LLPS-Sah-0920 | Sarcophilus harrisii | 99.77 | 0.0 | 877 |
LLPS-Aon-0264 | Aotus nancymaae | 99.77 | 0.0 | 877 |
LLPS-Sus-3161 | Sus scrofa | 99.77 | 0.0 | 875 |
LLPS-Maf-1409 | Macaca fascicularis | 99.77 | 0.0 | 877 |
LLPS-Caj-1164 | Callithrix jacchus | 99.77 | 0.0 | 877 |
LLPS-Gog-1901 | Gorilla gorilla | 99.77 | 0.0 | 877 |
LLPS-Paa-0582 | Papio anubis | 99.77 | 0.0 | 877 |
LLPS-Mal-1710 | Mandrillus leucophaeus | 99.77 | 0.0 | 877 |
LLPS-Fec-0254 | Felis catus | 99.53 | 0.0 | 875 |
LLPS-Cap-1732 | Cavia porcellus | 99.53 | 0.0 | 875 |
LLPS-Chs-1287 | Chlorocebus sabaeus | 99.53 | 0.0 | 868 |
LLPS-Fud-2623 | Fukomys damarensis | 99.53 | 0.0 | 875 |
LLPS-Bot-0629 | Bos taurus | 99.53 | 0.0 | 875 |
LLPS-Mup-1159 | Mustela putorius furo | 99.53 | 0.0 | 875 |
LLPS-Ova-0989 | Ovis aries | 99.53 | 0.0 | 874 |
LLPS-Mod-1745 | Monodelphis domestica | 99.47 | 0.0 | 771 |
LLPS-Caf-2108 | Canis familiaris | 99.3 | 0.0 | 874 |
LLPS-Ict-0534 | Ictidomys tridecemlineatus | 99.3 | 0.0 | 873 |
LLPS-Mum-0441 | Mus musculus | 99.3 | 0.0 | 873 |
LLPS-Ran-1696 | Rattus norvegicus | 99.3 | 0.0 | 873 |
LLPS-Mea-1861 | Mesocricetus auratus | 99.07 | 0.0 | 873 |
LLPS-Otg-0511 | Otolemur garnettii | 98.37 | 0.0 | 862 |
LLPS-Anc-0778 | Anolis carolinensis | 96.97 | 0.0 | 852 |
LLPS-Orc-3048 | Oryctolagus cuniculus | 95.94 | 0.0 | 858 |
LLPS-Aim-2974 | Ailuropoda melanoleuca | 95.91 | 0.0 | 856 |
LLPS-Pes-0107 | Pelodiscus sinensis | 92.9 | 0.0 | 603 |
LLPS-Lac-0197 | Latimeria chalumnae | 92.31 | 0.0 | 809 |
LLPS-Cea-4433 | Cercocebus atys | 92.25 | 0.0 | 680 |
LLPS-Asm-0430 | Astyanax mexicanus | 92.2 | 0.0 | 822 |
LLPS-Dar-3636 | Danio rerio | 91.95 | 0.0 | 816 |
LLPS-Orn-1514 | Oreochromis niloticus | 91.67 | 0.0 | 803 |
LLPS-Urm-0782 | Ursus maritimus | 91.12 | 0.0 | 790 |
LLPS-Tut-1177 | Tursiops truncatus | 90.89 | 0.0 | 787 |
LLPS-Scf-2713 | Scleropages formosus | 90.65 | 0.0 | 783 |
LLPS-Myl-2700 | Myotis lucifugus | 90.65 | 0.0 | 788 |
LLPS-Dio-0943 | Dipodomys ordii | 90.19 | 0.0 | 783 |
LLPS-Tar-1251 | Takifugu rubripes | 90.07 | 0.0 | 767 |
LLPS-Rhb-3577 | Rhinopithecus bieti | 89.93 | 0.0 | 773 |
LLPS-Orl-0063 | Oryzias latipes | 89.49 | 0.0 | 799 |
LLPS-Leo-2952 | Lepisosteus oculatus | 89.49 | 0.0 | 778 |
LLPS-Gaa-0899 | Gasterosteus aculeatus | 89.49 | 0.0 | 775 |
LLPS-Xim-2261 | Xiphophorus maculatus | 89.49 | 0.0 | 793 |
LLPS-Pof-2049 | Poecilia formosa | 89.25 | 0.0 | 790 |
LLPS-Icp-3149 | Ictalurus punctatus | 89.25 | 0.0 | 772 |
LLPS-Cii-1985 | Ciona intestinalis | 89.2 | 0.0 | 729 |
LLPS-Scm-1971 | Scophthalmus maximus | 88.79 | 0.0 | 788 |
LLPS-Xet-0761 | Xenopus tropicalis | 88.55 | 0.0 | 785 |
LLPS-Cis-0376 | Ciona savignyi | 86.52 | 0.0 | 726 |
LLPS-Ere-0235 | Erinaceus europaeus | 86.52 | 0.0 | 762 |
LLPS-Drm-1565 | Drosophila melanogaster | 84.27 | 0.0 | 724 |
LLPS-Art-2405 | Arabidopsis thaliana | 78.18 | 6e-122 | 370 |
LLPS-Ora-0010 | Ornithorhynchus anatinus | 78.12 | 0.0 | 697 |
LLPS-Viv-0576 | Vitis vinifera | 76.47 | 0.0 | 633 |
LLPS-Nia-0050 | Nicotiana attenuata | 76.09 | 0.0 | 630 |
LLPS-Cae-0090 | Caenorhabditis elegans | 76.0 | 0.0 | 677 |
LLPS-Hea-2219 | Helianthus annuus | 75.97 | 0.0 | 621 |
LLPS-Mae-0162 | Manihot esculenta | 75.84 | 0.0 | 626 |
LLPS-Sol-1369 | Solanum lycopersicum | 75.84 | 0.0 | 630 |
LLPS-Pot-0334 | Populus trichocarpa | 75.64 | 0.0 | 625 |
LLPS-Amt-0824 | Amborella trichopoda | 75.38 | 0.0 | 633 |
LLPS-Php-1383 | Physcomitrella patens | 75.38 | 0.0 | 628 |
LLPS-Nol-2576 | Nomascus leucogenys | 75.23 | 0.0 | 599 |
LLPS-Arl-1523 | Arabidopsis lyrata | 75.13 | 0.0 | 623 |
LLPS-Orni-0439 | Oryza nivara | 75.08 | 0.0 | 535 |
LLPS-Sot-0103 | Solanum tuberosum | 75.06 | 0.0 | 625 |
LLPS-Phv-1859 | Phaseolus vulgaris | 74.94 | 0.0 | 623 |
LLPS-Via-2025 | Vigna angularis | 74.94 | 0.0 | 624 |
LLPS-Cus-1569 | Cucumis sativus | 74.69 | 0.0 | 627 |
LLPS-Prp-0740 | Prunus persica | 74.62 | 0.0 | 626 |
LLPS-Lep-0009 | Leersia perrieri | 74.58 | 0.0 | 563 |
LLPS-Sob-0925 | Sorghum bicolor | 74.56 | 0.0 | 633 |
LLPS-Gor-0914 | Gossypium raimondii | 74.5 | 0.0 | 632 |
LLPS-Glm-2062 | Glycine max | 74.43 | 0.0 | 624 |
LLPS-Met-1832 | Medicago truncatula | 74.43 | 0.0 | 625 |
LLPS-Bro-0372 | Brassica oleracea | 74.36 | 0.0 | 618 |
LLPS-Sei-0848 | Setaria italica | 74.31 | 0.0 | 629 |
LLPS-Mua-0822 | Musa acuminata | 74.29 | 0.0 | 560 |
LLPS-Thc-0040 | Theobroma cacao | 74.25 | 0.0 | 619 |
LLPS-Sem-0136 | Selaginella moellendorffii | 74.11 | 0.0 | 623 |
LLPS-Brr-1478 | Brassica rapa | 74.1 | 0.0 | 615 |
LLPS-Ori-0285 | Oryza indica | 73.68 | 0.0 | 537 |
LLPS-Org-1102 | Oryza glaberrima | 73.52 | 7e-112 | 338 |
LLPS-Tra-0539 | Triticum aestivum | 73.21 | 0.0 | 639 |
LLPS-Brd-1708 | Brachypodium distachyon | 73.11 | 0.0 | 639 |
LLPS-Ors-1272 | Oryza sativa | 72.85 | 0.0 | 635 |
LLPS-Orb-1740 | Oryza barthii | 72.53 | 1e-174 | 500 |
LLPS-Brn-2147 | Brassica napus | 72.21 | 0.0 | 610 |
LLPS-Dac-1343 | Daucus carota | 72.14 | 0.0 | 528 |
LLPS-Hov-1775 | Hordeum vulgare | 71.87 | 0.0 | 630 |
LLPS-Orbr-0424 | Oryza brachyantha | 71.76 | 0.0 | 640 |
LLPS-Osl-1014 | Ostreococcus lucimarinus | 70.34 | 0.0 | 518 |
LLPS-Usm-1069 | Ustilago maydis | 70.05 | 0.0 | 596 |
LLPS-Orp-1708 | Oryza punctata | 69.95 | 0.0 | 609 |
LLPS-Spr-0256 | Sporisorium reilianum | 69.74 | 0.0 | 590 |
LLPS-Miv-0346 | Microbotryum violaceum | 69.69 | 0.0 | 618 |
LLPS-Abg-0136 | Absidia glauca | 69.52 | 0.0 | 617 |
LLPS-Scp-0216 | Schizosaccharomyces pombe | 69.01 | 0.0 | 613 |
LLPS-Tru-0411 | Triticum urartu | 68.79 | 0.0 | 590 |
LLPS-Scj-0723 | Schizosaccharomyces japonicus | 68.78 | 0.0 | 614 |
LLPS-Zem-0338 | Zea mays | 68.67 | 9e-27 | 115 |
LLPS-Coc-1980 | Corchorus capsularis | 68.33 | 0.0 | 580 |
LLPS-Scc-1132 | Schizosaccharomyces cryophilus | 67.84 | 0.0 | 602 |
LLPS-Crn-0251 | Cryptococcus neoformans | 67.61 | 0.0 | 600 |
LLPS-Pug-0321 | Puccinia graminis | 67.44 | 0.0 | 602 |
LLPS-Chc-0073 | Chondrus crispus | 67.06 | 0.0 | 592 |
LLPS-Gas-0611 | Galdieria sulphuraria | 66.82 | 0.0 | 601 |
LLPS-Put-0252 | Puccinia triticina | 66.59 | 0.0 | 586 |
LLPS-Tum-0048 | Tuber melanosporum | 66.21 | 0.0 | 596 |
LLPS-Mel-0141 | Melampsora laricipopulina | 66.13 | 0.0 | 595 |
LLPS-Cogr-0751 | Colletotrichum graminicola | 65.97 | 0.0 | 593 |
LLPS-Ved-0868 | Verticillium dahliae | 65.62 | 2e-169 | 493 |
LLPS-Cog-0783 | Colletotrichum gloeosporioides | 65.58 | 0.0 | 582 |
LLPS-Coo-0756 | Colletotrichum orbiculare | 65.58 | 0.0 | 582 |
LLPS-Nec-0713 | Neurospora crassa | 65.35 | 0.0 | 586 |
LLPS-Vir-2196 | Vigna radiata | 65.29 | 0.0 | 601 |
LLPS-Gag-0060 | Gaeumannomyces graminis | 64.84 | 1e-98 | 301 |
LLPS-Trv-1456 | Trichoderma virens | 64.72 | 0.0 | 580 |
LLPS-Orr-0452 | Oryza rufipogon | 64.65 | 0.0 | 537 |
LLPS-Beb-0959 | Beauveria bassiana | 64.64 | 0.0 | 583 |
LLPS-Mao-1401 | Magnaporthe oryzae | 64.58 | 0.0 | 580 |
LLPS-Ast-0122 | Aspergillus terreus | 64.53 | 0.0 | 579 |
LLPS-Aso-0779 | Aspergillus oryzae | 64.53 | 0.0 | 582 |
LLPS-Asf-0894 | Aspergillus flavus | 64.53 | 0.0 | 582 |
LLPS-Asni-1268 | Aspergillus niger | 64.45 | 0.0 | 583 |
LLPS-Blg-1317 | Blumeria graminis | 64.37 | 0.0 | 584 |
LLPS-Map-1206 | Magnaporthe poae | 64.29 | 0.0 | 577 |
LLPS-Trr-0666 | Trichoderma reesei | 64.25 | 0.0 | 582 |
LLPS-Nef-0688 | Neosartorya fischeri | 64.07 | 0.0 | 579 |
LLPS-Asc-0213 | Aspergillus clavatus | 64.07 | 0.0 | 581 |
LLPS-Yal-0874 | Yarrowia lipolytica | 64.06 | 0.0 | 579 |
LLPS-Fus-0302 | Fusarium solani | 63.87 | 0.0 | 577 |
LLPS-Asg-0055 | Ashbya gossypii | 63.57 | 0.0 | 573 |
LLPS-Kop-0264 | Komagataella pastoris | 63.43 | 0.0 | 575 |
LLPS-Chr-1532 | Chlamydomonas reinhardtii | 63.43 | 0.0 | 534 |
LLPS-Dos-1338 | Dothistroma septosporum | 63.22 | 0.0 | 552 |
LLPS-Sac-1034 | Saccharomyces cerevisiae | 62.87 | 0.0 | 573 |
LLPS-Asfu-0803 | Aspergillus fumigatus | 62.84 | 0.0 | 570 |
LLPS-Fuo-0492 | Fusarium oxysporum | 62.7 | 0.0 | 571 |
LLPS-Fuv-1014 | Fusarium verticillioides | 62.7 | 0.0 | 571 |
LLPS-Scs-0442 | Sclerotinia sclerotiorum | 61.93 | 0.0 | 559 |
LLPS-Phn-0347 | Phaeosphaeria nodorum | 61.82 | 0.0 | 550 |
LLPS-Asn-1245 | Aspergillus nidulans | 61.58 | 2e-149 | 436 |
LLPS-Pyt-0918 | Pyrenophora teres | 61.52 | 0.0 | 556 |
LLPS-Zyt-0469 | Zymoseptoria tritici | 61.14 | 0.0 | 554 |
LLPS-Cym-0744 | Cyanidioschyzon merolae | 60.63 | 0.0 | 543 |
LLPS-Pytr-0891 | Pyrenophora triticirepentis | 57.05 | 0.0 | 535 |
LLPS-Lem-0302 | Leptosphaeria maculans | 55.12 | 0.0 | 525 |