LLPS-Cap-1732
DDX39B
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | DDX39B |
Ensembl Gene: | ENSCPOG00000002335.4 |
Ensembl Protein: | ENSCPOP00000002121.3 |
Organism: | Cavia porcellus |
Taxa ID: | 10141 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Nucleolus, P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSCPOT00000002367.3 | ENSCPOP00000002121.3 |
UniProt | H0UYB6, H0UYB6_CAVPO | |
GeneBank | AAKN02021591 | |
RefSeq | XM_003473987.3, XM_005005490.2 | XP_003474035.1, XP_005005547.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAENDVDNEL LDYEDDEVET AAGGDGAEAP AKKDVKGSYV SIHSSGFRDF LLKPELLRAI 60 61 VDCGFEHPSE VQHECIPQAI LGMDVLCQAK SGMGKTAVFV LATLQQLEPV TGQVSVLVMC 120 121 HTRELAFQIS KEYERFSKYM PNVKVAVFFG GLSIKKDEEV LKKNCPHIVV GTPGRILALA 180 181 RNKSLNLKHI KHFILDECDK MLEQLDMRRD VQEIFRMTPH EKQVMMFSAT LGKEIRPVCR 240 241 KFMQDPMEIF VDDETKLTLH GLQQYYVKLK DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC 300 301 IALAQLLVEQ NFPAIAIHRG MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF 360 361 NYDMPEDSDT YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI 420 421 SSYIEQTR 428 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCAGAGA ATGATGTGGA CAATGAGCTC TTGGACTATG AAGACGATGA GGTGGAGACG 60 61 GCAGCTGGGG GAGATGGGGC CGAGGCCCCT GCCAAGAAGG ATGTCAAGGG CTCTTACGTC 120 121 TCCATCCATA GCTCTGGTTT CCGCGACTTT CTGCTCAAGC CAGAGTTGCT CCGGGCCATT 180 181 GTTGACTGTG GCTTTGAGCA TCCCTCAGAA GTCCAGCATG AGTGCATCCC TCAGGCCATT 240 241 CTAGGCATGG ATGTCCTGTG TCAGGCCAAA TCAGGCATGG GAAAGACAGC AGTGTTTGTC 300 301 TTGGCCACAC TGCAGCAGCT GGAGCCAGTG ACCGGGCAGG TGTCCGTACT GGTGATGTGT 360 361 CACACTAGGG AGTTGGCTTT TCAGATCAGC AAGGAGTACG AGCGCTTCTC TAAATACATG 420 421 CCCAATGTCA AGGTGGCTGT GTTTTTCGGT GGTCTGTCTA TCAAGAAGGA TGAAGAGGTG 480 481 CTGAAGAAGA ACTGCCCCCA CATTGTCGTG GGAACTCCTG GCCGCATTCT TGCCCTGGCT 540 541 CGAAACAAGA GCCTCAACCT CAAGCACATT AAACACTTCA TCCTGGATGA GTGCGACAAG 600 601 ATGCTTGAAC AGCTCGACAT GCGTCGGGAT GTCCAGGAAA TTTTTCGCAT GACCCCGCAC 660 661 GAGAAGCAGG TCATGATGTT CAGTGCTACC CTGGGCAAAG AGATTCGTCC AGTCTGCCGC 720 721 AAGTTCATGC AAGATCCAAT GGAGATCTTC GTGGACGATG AGACCAAGTT GACGCTGCAC 780 781 GGGTTGCAGC AGTACTACGT GAAACTGAAG GACAACGAGA AGAACCGGAA GCTCTTTGAC 840 841 CTTTTGGATG TTCTTGAGTT CAACCAGGTG GTGATCTTTG TGAAGTCTGT GCAGCGCTGC 900 901 ATCGCCCTGG CCCAGCTGCT GGTGGAGCAG AACTTCCCGG CCATCGCCAT CCACCGCGGG 960 961 ATGCCCCAGG AGGAGAGGCT CTCTCGGTAT CAGCAGTTTA AGGACTTTCA GCGGCGGATT 1020 1021 CTCGTGGCTA CCAACCTGTT CGGCCGGGGC ATGGACATTG AGCGGGTCAA CATCGCCTTC 1080 1081 AACTATGACA TGCCCGAGGA CTCGGACACC TACCTGCATC GGGTGGCCAG AGCAGGCCGG 1140 1141 TTTGGCACCA AGGGCTTGGC CATCACGTTC GTGTCGGACG AGAACGATGC CAAGATCCTC 1200 1201 AATGACGTGC AGGACCGCTT TGAGGTCAAC ATCAGCGAGC TGCCGGACGA GATCGACATC 1260 1261 TCCTCCTACA TTGAACAGAC TCGGTAG 1287 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Fud-2623 | Fukomys damarensis | 100.0 | 0.0 | 884 |
LLPS-Sus-3161 | Sus scrofa | 99.77 | 0.0 | 879 |
LLPS-Sah-0920 | Sarcophilus harrisii | 99.77 | 0.0 | 882 |
LLPS-Aon-0264 | Aotus nancymaae | 99.77 | 0.0 | 882 |
LLPS-Maf-1409 | Macaca fascicularis | 99.77 | 0.0 | 882 |
LLPS-Caj-1164 | Callithrix jacchus | 99.77 | 0.0 | 882 |
LLPS-Gog-1901 | Gorilla gorilla | 99.77 | 0.0 | 882 |
LLPS-Paa-0582 | Papio anubis | 99.77 | 0.0 | 882 |
LLPS-Mal-1710 | Mandrillus leucophaeus | 99.77 | 0.0 | 882 |
LLPS-Man-1842 | Macaca nemestrina | 99.77 | 0.0 | 882 |
LLPS-Hos-1151 | Homo sapiens | 99.77 | 0.0 | 882 |
LLPS-Pap-1115 | Pan paniscus | 99.77 | 0.0 | 882 |
LLPS-Pat-2506 | Pan troglodytes | 99.77 | 0.0 | 882 |
LLPS-Mam-0022 | Macaca mulatta | 99.77 | 0.0 | 882 |
LLPS-Eqc-0932 | Equus caballus | 99.77 | 0.0 | 882 |
LLPS-Poa-0394 | Pongo abelii | 99.77 | 0.0 | 882 |
LLPS-Ict-0534 | Ictidomys tridecemlineatus | 99.77 | 0.0 | 882 |
LLPS-Cas-0082 | Carlito syrichta | 99.77 | 0.0 | 882 |
LLPS-Chs-1287 | Chlorocebus sabaeus | 99.53 | 0.0 | 873 |
LLPS-Bot-0629 | Bos taurus | 99.53 | 0.0 | 880 |
LLPS-Ova-0989 | Ovis aries | 99.53 | 0.0 | 879 |
LLPS-Mup-1159 | Mustela putorius furo | 99.53 | 0.0 | 880 |
LLPS-Loa-1828 | Loxodonta africana | 99.53 | 0.0 | 875 |
LLPS-Fec-0254 | Felis catus | 99.53 | 0.0 | 880 |
LLPS-Mod-1745 | Monodelphis domestica | 99.47 | 0.0 | 778 |
LLPS-Mum-0441 | Mus musculus | 99.3 | 0.0 | 878 |
LLPS-Ran-1696 | Rattus norvegicus | 99.3 | 0.0 | 878 |
LLPS-Caf-2108 | Canis familiaris | 99.3 | 0.0 | 879 |
LLPS-Mea-1861 | Mesocricetus auratus | 99.07 | 0.0 | 877 |
LLPS-Otg-0511 | Otolemur garnettii | 98.37 | 0.0 | 867 |
LLPS-Anc-0778 | Anolis carolinensis | 96.97 | 0.0 | 858 |
LLPS-Orc-3048 | Oryctolagus cuniculus | 95.94 | 0.0 | 863 |
LLPS-Aim-2974 | Ailuropoda melanoleuca | 95.91 | 0.0 | 861 |
LLPS-Pes-0107 | Pelodiscus sinensis | 92.9 | 0.0 | 608 |
LLPS-Lac-0197 | Latimeria chalumnae | 92.31 | 0.0 | 813 |
LLPS-Cea-4433 | Cercocebus atys | 92.25 | 0.0 | 684 |
LLPS-Asm-0430 | Astyanax mexicanus | 92.2 | 0.0 | 827 |
LLPS-Dar-3636 | Danio rerio | 91.95 | 0.0 | 820 |
LLPS-Orn-1514 | Oreochromis niloticus | 91.67 | 0.0 | 807 |
LLPS-Urm-0782 | Ursus maritimus | 91.12 | 0.0 | 795 |
LLPS-Tut-1177 | Tursiops truncatus | 90.89 | 0.0 | 793 |
LLPS-Scf-2713 | Scleropages formosus | 90.65 | 0.0 | 788 |
LLPS-Myl-2700 | Myotis lucifugus | 90.65 | 0.0 | 793 |
LLPS-Dio-0943 | Dipodomys ordii | 90.19 | 0.0 | 789 |
LLPS-Tar-1251 | Takifugu rubripes | 90.07 | 0.0 | 771 |
LLPS-Rhb-1744 | Rhinopithecus bieti | 89.72 | 0.0 | 798 |
LLPS-Leo-2952 | Lepisosteus oculatus | 89.49 | 0.0 | 783 |
LLPS-Orl-0063 | Oryzias latipes | 89.49 | 0.0 | 804 |
LLPS-Gaa-0899 | Gasterosteus aculeatus | 89.49 | 0.0 | 780 |
LLPS-Xim-2261 | Xiphophorus maculatus | 89.49 | 0.0 | 798 |
LLPS-Icp-3149 | Ictalurus punctatus | 89.25 | 0.0 | 777 |
LLPS-Pof-1644 | Poecilia formosa | 89.25 | 0.0 | 798 |
LLPS-Cii-1985 | Ciona intestinalis | 89.2 | 0.0 | 734 |
LLPS-Scm-1971 | Scophthalmus maximus | 88.79 | 0.0 | 793 |
LLPS-Xet-0761 | Xenopus tropicalis | 88.55 | 0.0 | 790 |
LLPS-Cis-0376 | Ciona savignyi | 86.52 | 0.0 | 732 |
LLPS-Ere-0235 | Erinaceus europaeus | 86.52 | 0.0 | 767 |
LLPS-Drm-1565 | Drosophila melanogaster | 84.27 | 0.0 | 729 |
LLPS-Ora-0010 | Ornithorhynchus anatinus | 78.35 | 0.0 | 703 |
LLPS-Art-2405 | Arabidopsis thaliana | 77.38 | 4e-121 | 368 |
LLPS-Viv-0576 | Vitis vinifera | 76.47 | 0.0 | 638 |
LLPS-Cae-0090 | Caenorhabditis elegans | 76.24 | 0.0 | 682 |
LLPS-Nia-0050 | Nicotiana attenuata | 76.09 | 0.0 | 634 |
LLPS-Hea-2219 | Helianthus annuus | 75.97 | 0.0 | 626 |
LLPS-Sol-1369 | Solanum lycopersicum | 75.84 | 0.0 | 635 |
LLPS-Mae-0162 | Manihot esculenta | 75.84 | 0.0 | 631 |
LLPS-Pot-0334 | Populus trichocarpa | 75.64 | 0.0 | 630 |
LLPS-Php-1383 | Physcomitrella patens | 75.38 | 0.0 | 633 |
LLPS-Amt-0824 | Amborella trichopoda | 75.38 | 0.0 | 638 |
LLPS-Nol-2576 | Nomascus leucogenys | 75.23 | 0.0 | 604 |
LLPS-Arl-1523 | Arabidopsis lyrata | 75.13 | 0.0 | 628 |
LLPS-Orni-0439 | Oryza nivara | 75.08 | 0.0 | 540 |
LLPS-Sot-0103 | Solanum tuberosum | 75.06 | 0.0 | 630 |
LLPS-Via-2025 | Vigna angularis | 74.94 | 0.0 | 629 |
LLPS-Phv-1859 | Phaseolus vulgaris | 74.94 | 0.0 | 628 |
LLPS-Cus-1569 | Cucumis sativus | 74.69 | 0.0 | 631 |
LLPS-Prp-0740 | Prunus persica | 74.62 | 0.0 | 632 |
LLPS-Lep-0009 | Leersia perrieri | 74.58 | 0.0 | 568 |
LLPS-Sob-0925 | Sorghum bicolor | 74.56 | 0.0 | 637 |
LLPS-Gor-0914 | Gossypium raimondii | 74.5 | 0.0 | 637 |
LLPS-Glm-2062 | Glycine max | 74.43 | 0.0 | 629 |
LLPS-Met-1832 | Medicago truncatula | 74.43 | 0.0 | 629 |
LLPS-Bro-0372 | Brassica oleracea | 74.36 | 0.0 | 623 |
LLPS-Sei-0848 | Setaria italica | 74.31 | 0.0 | 634 |
LLPS-Mua-0822 | Musa acuminata | 74.29 | 0.0 | 566 |
LLPS-Thc-0040 | Theobroma cacao | 74.25 | 0.0 | 624 |
LLPS-Sem-0136 | Selaginella moellendorffii | 74.11 | 0.0 | 628 |
LLPS-Brr-1478 | Brassica rapa | 74.1 | 0.0 | 620 |
LLPS-Ori-0285 | Oryza indica | 73.68 | 0.0 | 542 |
LLPS-Org-1102 | Oryza glaberrima | 73.52 | 7e-114 | 343 |
LLPS-Tra-0539 | Triticum aestivum | 73.21 | 0.0 | 644 |
LLPS-Brd-1708 | Brachypodium distachyon | 73.11 | 0.0 | 644 |
LLPS-Ors-1272 | Oryza sativa | 72.85 | 0.0 | 640 |
LLPS-Orb-1740 | Oryza barthii | 72.53 | 2e-176 | 505 |
LLPS-Brn-2147 | Brassica napus | 72.21 | 0.0 | 615 |
LLPS-Dac-1343 | Daucus carota | 72.14 | 0.0 | 532 |
LLPS-Hov-1775 | Hordeum vulgare | 71.87 | 0.0 | 636 |
LLPS-Orbr-0424 | Oryza brachyantha | 71.76 | 0.0 | 645 |
LLPS-Zem-0338 | Zea mays | 71.6 | 4e-28 | 119 |
LLPS-Osl-1014 | Ostreococcus lucimarinus | 70.34 | 0.0 | 523 |
LLPS-Usm-1069 | Ustilago maydis | 70.05 | 0.0 | 601 |
LLPS-Orp-1708 | Oryza punctata | 69.95 | 0.0 | 613 |
LLPS-Spr-0256 | Sporisorium reilianum | 69.74 | 0.0 | 595 |
LLPS-Miv-0346 | Microbotryum violaceum | 69.45 | 0.0 | 622 |
LLPS-Abg-0136 | Absidia glauca | 69.28 | 0.0 | 620 |
LLPS-Tru-0411 | Triticum urartu | 68.87 | 0.0 | 595 |
LLPS-Scp-0216 | Schizosaccharomyces pombe | 68.78 | 0.0 | 616 |
LLPS-Scj-0723 | Schizosaccharomyces japonicus | 68.54 | 0.0 | 617 |
LLPS-Coc-1980 | Corchorus capsularis | 68.41 | 0.0 | 585 |
LLPS-Scc-1132 | Schizosaccharomyces cryophilus | 67.61 | 0.0 | 605 |
LLPS-Crn-0251 | Cryptococcus neoformans | 67.38 | 0.0 | 604 |
LLPS-Pug-0321 | Puccinia graminis | 67.21 | 0.0 | 605 |
LLPS-Chc-0073 | Chondrus crispus | 67.06 | 0.0 | 597 |
LLPS-Gas-0611 | Galdieria sulphuraria | 66.82 | 0.0 | 606 |
LLPS-Put-0252 | Puccinia triticina | 66.36 | 0.0 | 590 |
LLPS-Tum-0048 | Tuber melanosporum | 65.98 | 0.0 | 600 |
LLPS-Mel-0141 | Melampsora laricipopulina | 65.9 | 0.0 | 599 |
LLPS-Cogr-0751 | Colletotrichum graminicola | 65.73 | 0.0 | 595 |
LLPS-Coo-0756 | Colletotrichum orbiculare | 65.35 | 0.0 | 585 |
LLPS-Cog-0783 | Colletotrichum gloeosporioides | 65.35 | 0.0 | 585 |
LLPS-Ved-0868 | Verticillium dahliae | 65.33 | 2e-170 | 495 |
LLPS-Vir-2196 | Vigna radiata | 65.29 | 0.0 | 602 |
LLPS-Nec-0713 | Neurospora crassa | 65.12 | 0.0 | 588 |
LLPS-Orr-0452 | Oryza rufipogon | 64.65 | 0.0 | 542 |
LLPS-Trv-1456 | Trichoderma virens | 64.49 | 0.0 | 583 |
LLPS-Beb-0959 | Beauveria bassiana | 64.4 | 0.0 | 587 |
LLPS-Gag-0060 | Gaeumannomyces graminis | 64.38 | 1e-99 | 304 |
LLPS-Mao-1401 | Magnaporthe oryzae | 64.35 | 0.0 | 583 |
LLPS-Aso-0779 | Aspergillus oryzae | 64.3 | 0.0 | 585 |
LLPS-Asf-0894 | Aspergillus flavus | 64.3 | 0.0 | 585 |
LLPS-Ast-0122 | Aspergillus terreus | 64.3 | 0.0 | 583 |
LLPS-Asni-1268 | Aspergillus niger | 64.22 | 0.0 | 586 |
LLPS-Blg-1317 | Blumeria graminis | 64.14 | 0.0 | 588 |
LLPS-Trr-0666 | Trichoderma reesei | 64.02 | 0.0 | 584 |
LLPS-Asc-0213 | Aspergillus clavatus | 63.84 | 0.0 | 585 |
LLPS-Nef-0688 | Neosartorya fischeri | 63.84 | 0.0 | 583 |
LLPS-Yal-0874 | Yarrowia lipolytica | 63.82 | 0.0 | 583 |
LLPS-Fus-0302 | Fusarium solani | 63.64 | 0.0 | 579 |
LLPS-Map-1206 | Magnaporthe poae | 63.59 | 0.0 | 580 |
LLPS-Chr-1532 | Chlamydomonas reinhardtii | 63.43 | 0.0 | 537 |
LLPS-Asg-0055 | Ashbya gossypii | 63.34 | 0.0 | 577 |
LLPS-Kop-0264 | Komagataella pastoris | 63.19 | 0.0 | 579 |
LLPS-Dos-1338 | Dothistroma septosporum | 62.98 | 0.0 | 555 |
LLPS-Sac-1034 | Saccharomyces cerevisiae | 62.64 | 0.0 | 577 |
LLPS-Asfu-0803 | Aspergillus fumigatus | 62.61 | 0.0 | 573 |
LLPS-Fuv-1014 | Fusarium verticillioides | 62.47 | 0.0 | 573 |
LLPS-Fuo-0492 | Fusarium oxysporum | 62.47 | 0.0 | 573 |
LLPS-Scs-0442 | Sclerotinia sclerotiorum | 61.7 | 0.0 | 563 |
LLPS-Phn-0347 | Phaeosphaeria nodorum | 61.59 | 0.0 | 554 |
LLPS-Pyt-0918 | Pyrenophora teres | 61.52 | 0.0 | 561 |
LLPS-Asn-1245 | Aspergillus nidulans | 61.3 | 1e-150 | 439 |
LLPS-Zyt-0469 | Zymoseptoria tritici | 60.91 | 0.0 | 558 |
LLPS-Cym-0744 | Cyanidioschyzon merolae | 60.63 | 0.0 | 547 |
LLPS-Pytr-0891 | Pyrenophora triticirepentis | 57.05 | 0.0 | 540 |
LLPS-Lem-0302 | Leptosphaeria maculans | 55.12 | 0.0 | 530 |