LLPS-Leo-0191
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Telomeric repeat-binding factor |
Ensembl Gene: | ENSLOCG00000003784.1 |
Ensembl Protein: | ENSLOCP00000004537.1 |
Organism: | Lepisosteus oculatus |
Taxa ID: | 7918 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
PML nuclear body | Predicted from orthologs | (View) |
▼ FUNCTION
Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSLOCT00000004545.1 | ENSLOCP00000004537.1 |
Ensembl | ENSLOCT00000004530.1 | ENSLOCP00000004522.1 |
UniProt | W5M814, W5M814_LEPOC | |
GeneBank | AHAT01004340 | |
RefSeq | XM_015353397.1 | XP_015208883.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MEERESRSEV SAEFSEVEHV AKSWMLDFVI GSLCHHFRHD KYKEFNQSLS VLEALIPGFG 60 61 QFKSYQKKMI NICFVLSRIV NGKKTSLQYE EDARITPLMS ASHIWNVIEQ EIEQKTLYED 120 121 IKRLLFVQSV AVCLQSGQHQ KASWVLERLT ETTEVPQNLR MKLSMIVNKK DAYHQFLLNF 180 181 SFDVLLEKIK ILLDSFQKDY LSDFLLKAAS KVVEASKEKG VEEETTEIQE SGTAAPNEAQ 240 241 LQSDGPFQQE GVDAGPKITD VNYSNGNVFS LTPSASLLAK KTFRPRRKLF SVQNIEHWKP 300 301 KSSRKSFLVC RRNYSIRGTR LSFDFTKRKT SELKKKRVKR HWTFEENQAL KAGVRRYGEG 360 361 NWAKILKHFE FNNRTGVMLK DRWRTMKKLY LVSENNSSED 400 |
Nucleotide CDS Sequence (FASTA) |
1 CAAGAAGGCA AGATGGAGGA GCGGGAGTCC CGCTCGGAAG TGTCTGCGGA GTTTTCAGAA 60 61 GTTGAACATG TCGCTAAAAG TTGGATGCTG GACTTTGTAA TTGGTTCTTT GTGTCATCAT 120 121 TTCAGACACG ACAAGTACAA GGAATTCAAC CAGTCGCTGA GTGTTTTAGA AGCTTTGATT 180 181 CCGGGATTTG GTCAGTTCAA GTCTTATCAG AAGAAGATGA TTAACATCTG TTTTGTCCTG 240 241 TCCAGGATTG TGAATGGGAA AAAAACAAGT CTCCAGTACG AAGAAGATGC ACGAATTACA 300 301 CCTTTAATGT CTGCTTCCCA CATTTGGAAT GTAATAGAAC AAGAGATTGA GCAAAAGACA 360 361 CTATATGAAG ATATCAAAAG GTTACTGTTT GTTCAGTCTG TAGCAGTTTG TTTGCAAAGT 420 421 GGACAACATC AAAAGGCATC ATGGGTTCTT GAGAGGCTGA CAGAAACCAC TGAAGTGCCG 480 481 CAGAACCTAA GAATGAAACT TTCCATGATT GTGAACAAGA AGGATGCATA TCATCAATTT 540 541 CTCTTGAACT TCAGTTTTGA CGTTTTGTTG GAGAAAATCA AGATATTACT TGATTCCTTT 600 601 CAAAAAGACT ATCTGTCTGA TTTCCTACTA AAGGCAGCAT CAAAGGTTGT AGAGGCCAGC 660 661 AAGGAAAAAG GAGTGGAAGA GGAAACGAGC CCAGAAGGAA ACTCTTTTCT GTGCAAAACA 720 721 TCGAACATTG GAAGCCGAAA AGTTCCAGAA AATCTTTTCT CGTCTGTCGG AGAAATTACA 780 781 GCATCAGAGA CCATTACAAG GTCCCTCACA TCACGGAGCC TTTCGCTCGT GGATTCCAGG 840 841 GCTCGACGAG CTTCACCCAC ATGCTCATCC CTTTCGAGGA GTAGTGGGAG GCCCTCGACC 900 901 CGGTTCAAAA AGGGCGCTGC CTCTAAAAGA TATAACTCAG GAACACGGTT ATCCTTTGAT 960 961 TTTACAAAAA GGAAAACCTC AGAATTAAAA AAGAAAAGAG TAAAGAGGCA CTGGACCTTT 1020 1021 GAGGAAAACC AGGCGCTAAA AGCAGGGGTG AGACGTTATG GAGAAGGAAA TTGGGCTAAA 1080 1081 ATACTGAAGC ATTTCGAGTT TAATAATCGT ACTGGTGTCA TGTTAAAGGA CAGGTGGAGA 1140 1141 ACCATGAAGA AATTGTATCT GGTCTCTGAA AACAATTCTT CTGAAGACTG A 1191 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nuclear chromosome, telomeric region | |
Molecular Function | Double-stranded telomeric DNA binding | |
Molecular Function | Protein homodimerization activity | |
Biological Process | Cell cycle | |
Biological Process | Telomere maintenance |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Orc-0515 | Oryctolagus cuniculus | 66.0 | 1e-14 | 79.7 |
LLPS-Scm-1891 | Scophthalmus maximus | 64.71 | 6e-14 | 77.8 |
LLPS-Fec-2845 | Felis catus | 64.15 | 3e-15 | 81.6 |
LLPS-Ict-3331 | Ictidomys tridecemlineatus | 64.15 | 5e-15 | 80.9 |
LLPS-Caf-4256 | Canis familiaris | 64.15 | 3e-15 | 81.6 |
LLPS-Fud-3158 | Fukomys damarensis | 64.15 | 2e-15 | 81.6 |
LLPS-Sah-2088 | Sarcophilus harrisii | 64.15 | 2e-15 | 82.0 |
LLPS-Mum-2953 | Mus musculus | 64.15 | 8e-15 | 80.1 |
LLPS-Dio-2997 | Dipodomys ordii | 64.15 | 4e-15 | 81.3 |
LLPS-Aon-1120 | Aotus nancymaae | 63.83 | 1e-12 | 73.6 |
LLPS-Paa-2691 | Papio anubis | 63.83 | 1e-12 | 73.6 |
LLPS-Mod-3482 | Monodelphis domestica | 62.96 | 2e-15 | 81.6 |
LLPS-Anc-0835 | Anolis carolinensis | 62.75 | 2e-14 | 79.0 |
LLPS-Rhb-3777 | Rhinopithecus bieti | 62.26 | 6e-15 | 80.1 |
LLPS-Otg-0292 | Otolemur garnettii | 62.26 | 9e-15 | 79.7 |
LLPS-Man-3524 | Macaca nemestrina | 62.26 | 7e-15 | 80.1 |
LLPS-Pat-1768 | Pan troglodytes | 62.26 | 7e-15 | 80.1 |
LLPS-Pap-1524 | Pan paniscus | 62.26 | 5e-15 | 80.9 |
LLPS-Urm-2433 | Ursus maritimus | 62.26 | 4e-15 | 80.9 |
LLPS-Hos-2125 | Homo sapiens | 62.26 | 7e-15 | 80.1 |
LLPS-Nol-1345 | Nomascus leucogenys | 62.26 | 7e-15 | 80.1 |
LLPS-Mam-1653 | Macaca mulatta | 62.26 | 7e-15 | 80.1 |
LLPS-Eqc-2415 | Equus caballus | 62.26 | 6e-15 | 80.5 |
LLPS-Cap-2187 | Cavia porcellus | 62.26 | 1e-14 | 79.3 |
LLPS-Caj-1412 | Callithrix jacchus | 62.26 | 7e-15 | 80.1 |
LLPS-Gog-0601 | Gorilla gorilla | 62.26 | 8e-15 | 80.1 |
LLPS-Cea-1787 | Cercocebus atys | 62.26 | 7e-15 | 80.5 |
LLPS-Sus-2357 | Sus scrofa | 62.26 | 8e-15 | 80.1 |
LLPS-Chs-1601 | Chlorocebus sabaeus | 62.26 | 7e-15 | 80.1 |
LLPS-Mea-2149 | Mesocricetus auratus | 62.26 | 1e-14 | 79.3 |
LLPS-Maf-2728 | Macaca fascicularis | 62.26 | 7e-15 | 80.1 |
LLPS-Aim-0697 | Ailuropoda melanoleuca | 62.26 | 1e-14 | 79.7 |
LLPS-Mup-3531 | Mustela putorius furo | 62.26 | 3e-15 | 80.9 |
LLPS-Ova-4190 | Ovis aries | 62.26 | 6e-15 | 80.5 |
LLPS-Mal-4264 | Mandrillus leucophaeus | 62.26 | 8e-15 | 80.1 |
LLPS-Ran-2845 | Rattus norvegicus | 62.26 | 8e-14 | 77.0 |
LLPS-Bot-1012 | Bos taurus | 62.26 | 8e-15 | 80.1 |
LLPS-Tut-1305 | Tursiops truncatus | 62.26 | 7e-15 | 80.1 |
LLPS-Scf-0867 | Scleropages formosus | 62.07 | 1e-15 | 80.5 |
LLPS-Xet-1615 | Xenopus tropicalis | 61.4 | 1e-15 | 82.4 |
LLPS-Poa-2571 | Pongo abelii | 60.38 | 2e-14 | 78.6 |
LLPS-Ora-0747 | Ornithorhynchus anatinus | 60.38 | 7e-14 | 76.6 |
LLPS-Myl-0584 | Myotis lucifugus | 60.38 | 2e-14 | 79.0 |
LLPS-Orn-3340 | Oreochromis niloticus | 58.82 | 4e-12 | 72.0 |
LLPS-Pes-3155 | Pelodiscus sinensis | 58.49 | 1e-13 | 76.6 |
LLPS-Tar-1491 | Takifugu rubripes | 57.45 | 5e-11 | 65.5 |
LLPS-Orl-1567 | Oryzias latipes | 57.41 | 3e-13 | 75.5 |
LLPS-Anp-1253 | Anas platyrhynchos | 55.56 | 1e-13 | 76.6 |
LLPS-Fia-1087 | Ficedula albicollis | 53.7 | 3e-12 | 72.4 |
LLPS-Tag-0551 | Taeniopygia guttata | 53.7 | 2e-12 | 72.8 |
LLPS-Asm-1327 | Astyanax mexicanus | 53.7 | 3e-10 | 66.2 |
LLPS-Xim-2156 | Xiphophorus maculatus | 53.7 | 3e-11 | 69.3 |
LLPS-Meg-1370 | Meleagris gallopavo | 52.08 | 5e-09 | 62.0 |
LLPS-Gaga-0102 | Gallus gallus | 51.85 | 4e-11 | 68.9 |
LLPS-Dar-0854 | Danio rerio | 51.72 | 1e-10 | 67.0 |
LLPS-Pof-2341 | Poecilia formosa | 50.0 | 1e-10 | 67.4 |
LLPS-Icp-2675 | Ictalurus punctatus | 49.21 | 3e-10 | 66.2 |
LLPS-Sem-0878 | Selaginella moellendorffii | 45.16 | 3e-06 | 53.5 |
LLPS-Gaa-0255 | Gasterosteus aculeatus | 43.06 | 2e-11 | 69.7 |
LLPS-Cii-1470 | Ciona intestinalis | 40.21 | 2e-10 | 65.9 |
LLPS-Cis-1702 | Ciona savignyi | 39.67 | 4e-12 | 68.6 |
LLPS-Loa-3164 | Loxodonta africana | 37.28 | 7e-70 | 233 |
LLPS-Lac-1115 | Latimeria chalumnae | 36.81 | 4e-51 | 181 |
LLPS-Cas-0181 | Carlito syrichta | 35.89 | 3e-58 | 201 |