LLPS-Glm-1690
GLYMA_15G048200
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Ribosome assembly factor mrt4 |
| Gene Name: | GLYMA_15G048200 |
| Ensembl Gene: | GLYMA_15G048200 |
| Ensembl Protein: | KRH10455 |
| Organism: | Glycine max |
| Taxa ID: | 3847 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, Stress granule, Others | Predicted from orthologs | (View) |
▼ FUNCTION
| Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | KRH10455 | KRH10455 |
| UniProt | I1MDQ9, I1MDQ9_SOYBN | |
| GeneBank | CM000848 | KRH10455.1 |
| RefSeq | XM_006596901.2 | XP_006596964.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPKSKRNRQV TLSKTKKKGR DHKETIVNGI KDAAEKYGCV YVFSFENMRN QKLKEFREQL 60 61 KSNSRFFLGS NKVMQVALGR SASDEIRPGL HKVSKLLRGD SGMFFTNLSK EEVERLFKEF 120 121 EEYDFARTGS IATEKVDLKE GPLEQFTHEM EPFLRKQGMP VRLNKGVVEL VSDFVVCDEG 180 181 KPLSPEAARI LRLMGIKMAT FRLNLICRWS PDEFELYIDG PDESDIECS 229 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCAAAGT CAAAGAGAAA TAGACAAGTT ACGCTGTCAA AGACGAAGAA AAAGGGAAGA 60 61 GACCACAAAG AGACGATAGT GAACGGAATA AAAGATGCGG CAGAAAAGTA CGGGTGCGTG 120 121 TACGTGTTCT CCTTCGAGAA TATGAGGAAT CAGAAATTAA AGGAGTTCAG GGAACAGTTG 180 181 AAATCGAATA GCAGGTTCTT TCTGGGTTCT AACAAAGTAA TGCAAGTTGC TTTAGGTCGC 240 241 TCCGCTTCAG ATGAGATCAG ACCTGGCCTT CACAAGGTTT CAAAGCTATT GCGTGGAGAT 300 301 TCTGGGATGT TTTTCACCAA TTTGTCTAAG GAAGAAGTTG AAAGGCTGTT TAAAGAATTT 360 361 GAGGAATATG ACTTTGCAAG AACAGGAAGC ATTGCCACTG AAAAGGTGGA TCTCAAAGAG 420 421 GGTCCTTTAG AGCAATTCAC TCATGAGATG GAACCCTTTC TCAGGAAGCA AGGCATGCCT 480 481 GTTCGGTTAA ATAAAGGAGT TGTGGAGCTT GTTTCGGATT TTGTTGTTTG CGACGAAGGA 540 541 AAGCCTTTGT CACCAGAGGC TGCTCGTATA CTGCGTTTAA TGGGAATCAA GATGGCTACA 600 601 TTTCGACTTA ACTTAATTTG CAGATGGAGT CCCGATGAGT TTGAACTTTA CATTGATGGG 660 661 CCTGATGAAT CAGATATTGA ATGCTCGTAG 690 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Nucleolus | |
Biological Process | Nuclear-transcribed mRNA catabolic process | |
Biological Process | Ribosomal large subunit assembly | |
Biological Process | RRNA processing |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Phv-0771 | Phaseolus vulgaris | 92.58 | 9e-147 | 416 |
| LLPS-Nia-0816 | Nicotiana attenuata | 84.28 | 1e-122 | 355 |
| LLPS-Met-0286 | Medicago truncatula | 84.21 | 4e-131 | 376 |
| LLPS-Sol-0257 | Solanum lycopersicum | 82.53 | 3e-121 | 351 |
| LLPS-Sot-0334 | Solanum tuberosum | 82.1 | 3e-120 | 348 |
| LLPS-Mae-0672 | Manihot esculenta | 81.66 | 3e-129 | 371 |
| LLPS-Prp-1260 | Prunus persica | 81.66 | 2e-126 | 364 |
| LLPS-Pot-0247 | Populus trichocarpa | 81.22 | 2e-127 | 367 |
| LLPS-Thc-0386 | Theobroma cacao | 80.79 | 2e-128 | 369 |
| LLPS-Viv-0130 | Vitis vinifera | 80.35 | 2e-126 | 364 |
| LLPS-Gor-0836 | Gossypium raimondii | 79.91 | 3e-119 | 346 |
| LLPS-Coc-0601 | Corchorus capsularis | 79.91 | 1e-126 | 365 |
| LLPS-Dac-0576 | Daucus carota | 79.91 | 1e-125 | 362 |
| LLPS-Hea-1606 | Helianthus annuus | 78.6 | 8e-125 | 360 |
| LLPS-Brn-0031 | Brassica napus | 76.42 | 2e-121 | 352 |
| LLPS-Brr-2166 | Brassica rapa | 75.98 | 1e-119 | 347 |
| LLPS-Bro-1044 | Brassica oleracea | 75.98 | 9e-121 | 350 |
| LLPS-Mua-0575 | Musa acuminata | 73.57 | 2e-108 | 318 |
| LLPS-Amt-0057 | Amborella trichopoda | 72.73 | 4e-113 | 330 |
| LLPS-Sob-0405 | Sorghum bicolor | 72.4 | 1e-105 | 311 |
| LLPS-Ors-0020 | Oryza sativa | 71.04 | 2e-105 | 311 |
| LLPS-Orni-0293 | Oryza nivara | 71.04 | 2e-105 | 311 |
| LLPS-Ori-1411 | Oryza indica | 71.04 | 2e-105 | 311 |
| LLPS-Orm-1543 | Oryza meridionalis | 70.75 | 5e-91 | 293 |
| LLPS-Art-0182 | Arabidopsis thaliana | 70.64 | 1e-109 | 322 |
| LLPS-Tra-0769 | Triticum aestivum | 70.59 | 5e-102 | 302 |
| LLPS-Sei-0193 | Setaria italica | 70.59 | 3e-103 | 306 |
| LLPS-Cus-1934 | Cucumis sativus | 70.53 | 9e-92 | 275 |
| LLPS-Lep-0442 | Leersia perrieri | 69.83 | 9e-107 | 315 |
| LLPS-Brd-0984 | Brachypodium distachyon | 69.68 | 4e-104 | 308 |
| LLPS-Orb-0356 | Oryza barthii | 69.34 | 2e-91 | 277 |
| LLPS-Orbr-0617 | Oryza brachyantha | 68.83 | 5e-104 | 308 |
| LLPS-Hov-0376 | Hordeum vulgare | 68.72 | 8e-94 | 281 |
| LLPS-Org-0068 | Oryza glaberrima | 67.66 | 5e-102 | 303 |
| LLPS-Sem-0939 | Selaginella moellendorffii | 67.59 | 2e-100 | 298 |
| LLPS-Orgl-0268 | Oryza glumaepatula | 67.37 | 4e-102 | 304 |
| LLPS-Zem-0953 | Zea mays | 65.69 | 4e-99 | 296 |
| LLPS-Php-0975 | Physcomitrella patens | 65.44 | 5e-85 | 259 |
| LLPS-Orp-0959 | Oryza punctata | 65.0 | 9e-35 | 127 |
| LLPS-Via-0071 | Vigna angularis | 59.39 | 2e-81 | 248 |
| LLPS-Vir-1931 | Vigna radiata | 57.83 | 4e-70 | 231 |
| LLPS-Orr-0618 | Oryza rufipogon | 57.55 | 5e-77 | 242 |
| LLPS-Anp-0054 | Anas platyrhynchos | 57.33 | 8e-14 | 68.9 |
| LLPS-Ran-0392 | Rattus norvegicus | 54.94 | 3e-47 | 160 |
| LLPS-Pes-1549 | Pelodiscus sinensis | 53.94 | 2e-48 | 164 |
| LLPS-Sus-0155 | Sus scrofa | 53.4 | 6e-56 | 186 |
| LLPS-Tag-0648 | Taeniopygia guttata | 52.6 | 7e-49 | 165 |
| LLPS-Lac-0254 | Latimeria chalumnae | 52.31 | 8e-67 | 213 |
| LLPS-Fud-0849 | Fukomys damarensis | 52.15 | 4e-63 | 203 |
| LLPS-Loa-0769 | Loxodonta africana | 51.67 | 2e-61 | 199 |
| LLPS-Mum-0544 | Mus musculus | 51.67 | 9e-60 | 194 |
| LLPS-Meg-0637 | Meleagris gallopavo | 51.42 | 6e-64 | 205 |
| LLPS-Otg-1079 | Otolemur garnettii | 51.2 | 4e-62 | 201 |
| LLPS-Ict-1901 | Ictidomys tridecemlineatus | 51.2 | 4e-62 | 201 |
| LLPS-Mea-1032 | Mesocricetus auratus | 51.2 | 3e-62 | 201 |
| LLPS-Myl-0507 | Myotis lucifugus | 51.2 | 9e-62 | 200 |
| LLPS-Bot-0997 | Bos taurus | 51.2 | 2e-62 | 201 |
| LLPS-Asm-0545 | Astyanax mexicanus | 50.92 | 2e-63 | 204 |
| LLPS-Man-1423 | Macaca nemestrina | 50.72 | 1e-61 | 199 |
| LLPS-Fec-0015 | Felis catus | 50.72 | 8e-62 | 200 |
| LLPS-Urm-2623 | Ursus maritimus | 50.72 | 4e-61 | 198 |
| LLPS-Mam-1070 | Macaca mulatta | 50.72 | 1e-61 | 199 |
| LLPS-Cap-1950 | Cavia porcellus | 50.72 | 8e-62 | 200 |
| LLPS-Eqc-0501 | Equus caballus | 50.72 | 2e-61 | 199 |
| LLPS-Caj-1348 | Callithrix jacchus | 50.72 | 3e-62 | 201 |
| LLPS-Aon-2594 | Aotus nancymaae | 50.72 | 5e-62 | 200 |
| LLPS-Maf-1201 | Macaca fascicularis | 50.72 | 1e-61 | 199 |
| LLPS-Aim-0492 | Ailuropoda melanoleuca | 50.72 | 8e-61 | 197 |
| LLPS-Mup-0508 | Mustela putorius furo | 50.72 | 2e-60 | 196 |
| LLPS-Mal-0374 | Mandrillus leucophaeus | 50.72 | 2e-61 | 199 |
| LLPS-Gaga-3258 | Gallus gallus | 50.47 | 2e-61 | 199 |
| LLPS-Leo-1142 | Lepisosteus oculatus | 50.47 | 1e-65 | 210 |
| LLPS-Tut-0625 | Tursiops truncatus | 50.47 | 8e-61 | 197 |
| LLPS-Orl-1269 | Oryzias latipes | 50.46 | 2e-64 | 206 |
| LLPS-Orn-0512 | Oreochromis niloticus | 50.44 | 3e-65 | 209 |
| LLPS-Hos-0180 | Homo sapiens | 50.24 | 4e-61 | 198 |
| LLPS-Pap-1168 | Pan paniscus | 50.24 | 6e-61 | 197 |
| LLPS-Pat-2815 | Pan troglodytes | 50.24 | 4e-61 | 198 |
| LLPS-Cas-0944 | Carlito syrichta | 50.24 | 1e-60 | 197 |
| LLPS-Caf-2962 | Canis familiaris | 50.24 | 2e-60 | 196 |
| LLPS-Poa-0433 | Pongo abelii | 50.24 | 4e-61 | 198 |
| LLPS-Gog-0212 | Gorilla gorilla | 50.24 | 2e-61 | 199 |
| LLPS-Dio-0782 | Dipodomys ordii | 50.24 | 2e-62 | 202 |
| LLPS-Dar-1855 | Danio rerio | 50.22 | 1e-68 | 218 |
| LLPS-Icp-0937 | Ictalurus punctatus | 50.0 | 5e-69 | 218 |
| LLPS-Scf-0003 | Scleropages formosus | 50.0 | 2e-63 | 204 |
| LLPS-Drm-1649 | Drosophila melanogaster | 50.0 | 5e-70 | 221 |
| LLPS-Pof-0506 | Poecilia formosa | 49.77 | 9e-63 | 202 |
| LLPS-Ten-0227 | Tetraodon nigroviridis | 49.77 | 1e-62 | 202 |
| LLPS-Rhb-1728 | Rhinopithecus bieti | 49.76 | 2e-60 | 196 |
| LLPS-Orc-1002 | Oryctolagus cuniculus | 49.76 | 5e-61 | 198 |
| LLPS-Chs-1377 | Chlorocebus sabaeus | 49.76 | 2e-60 | 196 |
| LLPS-Mod-2992 | Monodelphis domestica | 49.53 | 2e-62 | 201 |
| LLPS-Ova-0501 | Ovis aries | 49.46 | 8e-22 | 92.0 |
| LLPS-Sah-1542 | Sarcophilus harrisii | 49.26 | 3e-57 | 188 |
| LLPS-Xet-0187 | Xenopus tropicalis | 49.07 | 2e-63 | 204 |
| LLPS-Fia-0421 | Ficedula albicollis | 49.06 | 1e-59 | 194 |
| LLPS-Tar-2638 | Takifugu rubripes | 48.67 | 2e-63 | 204 |
| LLPS-Scm-0022 | Scophthalmus maximus | 48.61 | 1e-61 | 199 |
| LLPS-Chc-0354 | Chondrus crispus | 48.15 | 2e-37 | 135 |
| LLPS-Gaa-0982 | Gasterosteus aculeatus | 47.77 | 1e-60 | 197 |
| LLPS-Cii-0010 | Ciona intestinalis | 47.49 | 2e-44 | 154 |
| LLPS-Cis-0248 | Ciona savignyi | 47.37 | 9e-56 | 186 |
| LLPS-Chr-0333 | Chlamydomonas reinhardtii | 46.54 | 4e-56 | 186 |
| LLPS-Ora-0003 | Ornithorhynchus anatinus | 46.31 | 2e-53 | 178 |
| LLPS-Cae-0776 | Caenorhabditis elegans | 45.71 | 1e-52 | 176 |
| LLPS-Nol-1209 | Nomascus leucogenys | 45.45 | 1e-54 | 181 |
| LLPS-Osl-0377 | Ostreococcus lucimarinus | 45.05 | 2e-57 | 189 |
| LLPS-Paa-2571 | Papio anubis | 44.98 | 3e-50 | 170 |
| LLPS-Cea-0480 | Cercocebus atys | 44.88 | 2e-50 | 169 |
| LLPS-Miv-0199 | Microbotryum violaceum | 42.51 | 2e-44 | 154 |
| LLPS-Dos-0983 | Dothistroma septosporum | 39.91 | 6e-43 | 151 |
| LLPS-Crn-0159 | Cryptococcus neoformans | 39.37 | 3e-43 | 152 |
| LLPS-Cym-0105 | Cyanidioschyzon merolae | 39.29 | 2e-40 | 144 |
| LLPS-Scj-0063 | Schizosaccharomyces japonicus | 39.08 | 2e-43 | 152 |
| LLPS-Ast-0779 | Aspergillus terreus | 39.06 | 4e-37 | 136 |
| LLPS-Asni-0217 | Aspergillus niger | 38.98 | 6e-41 | 146 |
| LLPS-Abg-0251 | Absidia glauca | 38.97 | 3e-47 | 162 |
| LLPS-Usm-0675 | Ustilago maydis | 38.74 | 5e-45 | 159 |
| LLPS-Pug-0300 | Puccinia graminis | 38.46 | 3e-40 | 144 |
| LLPS-Tum-1148 | Tuber melanosporum | 38.14 | 1e-36 | 135 |
| LLPS-Spr-0631 | Sporisorium reilianum | 37.84 | 3e-44 | 156 |
| LLPS-Scc-0290 | Schizosaccharomyces cryophilus | 37.84 | 5e-41 | 146 |
| LLPS-Zyt-0814 | Zymoseptoria tritici | 37.67 | 7e-37 | 135 |
| LLPS-Asfu-0216 | Aspergillus fumigatus | 37.34 | 3e-37 | 136 |
| LLPS-Nec-0262 | Neurospora crassa | 37.28 | 4e-40 | 144 |
| LLPS-Phn-0030 | Phaeosphaeria nodorum | 36.94 | 1e-40 | 145 |
| LLPS-Nef-0724 | Neosartorya fischeri | 36.93 | 2e-36 | 134 |
| LLPS-Mel-1010 | Melampsora laricipopulina | 36.7 | 1e-33 | 127 |
| LLPS-Lem-0190 | Leptosphaeria maculans | 36.49 | 2e-42 | 150 |
| LLPS-Put-0407 | Puccinia triticina | 36.44 | 6e-37 | 135 |
| LLPS-Scp-0796 | Schizosaccharomyces pombe | 36.25 | 3e-40 | 144 |
| LLPS-Fus-0226 | Fusarium solani | 35.96 | 6e-36 | 133 |
| LLPS-Map-0508 | Magnaporthe poae | 35.81 | 1e-37 | 138 |
| LLPS-Mao-0207 | Magnaporthe oryzae | 35.81 | 1e-38 | 140 |
| LLPS-Coo-0320 | Colletotrichum orbiculare | 35.81 | 2e-38 | 139 |
| LLPS-Pytr-0516 | Pyrenophora triticirepentis | 35.59 | 2e-39 | 142 |
| LLPS-Asn-0688 | Aspergillus nidulans | 35.48 | 5e-33 | 125 |
| LLPS-Yal-0137 | Yarrowia lipolytica | 35.09 | 2e-36 | 134 |
| LLPS-Asf-0869 | Aspergillus flavus | 35.08 | 7e-33 | 125 |
| LLPS-Aso-0134 | Aspergillus oryzae | 35.08 | 7e-33 | 125 |
| LLPS-Asc-0356 | Aspergillus clavatus | 34.96 | 7e-36 | 133 |
| LLPS-Gag-1021 | Gaeumannomyces graminis | 34.89 | 4e-37 | 136 |
| LLPS-Pyt-0156 | Pyrenophora teres | 34.68 | 3e-38 | 139 |
| LLPS-Cogr-1212 | Colletotrichum graminicola | 34.57 | 5e-38 | 138 |
| LLPS-Ved-0394 | Verticillium dahliae | 34.2 | 2e-35 | 132 |
| LLPS-Beb-0133 | Beauveria bassiana | 34.19 | 4e-38 | 139 |
| LLPS-Fuo-0458 | Fusarium oxysporum | 34.16 | 5e-37 | 135 |
| LLPS-Cog-0357 | Colletotrichum gloeosporioides | 34.02 | 2e-35 | 132 |
| LLPS-Trr-0847 | Trichoderma reesei | 33.77 | 5e-33 | 125 |
| LLPS-Blg-0497 | Blumeria graminis | 33.48 | 2e-35 | 131 |
| LLPS-Fuv-0918 | Fusarium verticillioides | 32.92 | 7e-34 | 127 |
| LLPS-Asg-0767 | Ashbya gossypii | 32.88 | 4e-27 | 109 |
| LLPS-Trv-0683 | Trichoderma virens | 32.13 | 3e-33 | 126 |
| LLPS-Sac-0060 | Saccharomyces cerevisiae | 31.56 | 3e-28 | 112 |
| LLPS-Gas-0408 | Galdieria sulphuraria | 31.1 | 2e-29 | 115 |
| LLPS-Kop-0908 | Komagataella pastoris | 29.73 | 4e-25 | 104 |
| LLPS-Scs-0609 | Sclerotinia sclerotiorum | 20.63 | 9e-06 | 49.7 |