• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Bro-0513
106318775

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: 5'-3' exoribonuclease
Gene Name: 106318775
Ensembl Gene: Bo9g056160
Ensembl Protein: Bo9g056160.1
Organism: Brassica oleracea
Taxa ID: 109376
LLPS Type: Client


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
P-bodyPredicted from orthologs(View)

▼ FUNCTION

Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblBo9g056160.1Bo9g056160.1
UniProtA0A0D3E5Z0, A0A0D3E5Z0_BRAOL
RefSeqXM_013756904.1XP_013612358.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MGVPAFYRWL  ADRYPKSISD  VVEEESGLGA  LDITRPNPNG  FEFDNLYLDM  NGIIHPCFHP  60
61    EGKHAPATYD  DVFKSMFEYI  DHLFTLVRPR  KLLYLAIDGV  APRAKMNQQR  SRRFRAAKDA  120
121   AEAEAEEEML  RQDFEIGGQI  LSAKEKAETS  DSNVITPGTP  FMAVLSVALQ  YYIQSRLNRN  180
181   PGWRFVKVIL  SDSNVPGEGE  HKIMSYIRLQ  RGLPGFDPNT  RHCLYGLDAD  LIMLSLATHE  240
241   VHFSILREVI  AYPGQQEKCF  VCGQTGHFAA  DCPGKSGIPN  AASDIPIHKK  KYQFLNIWVL  300
301   REYLQYELAI  PDPPFTINFE  RIIDDFVFLC  FFVGNDFLPH  MPTLEIREGA  INLLMHVYRK  360
361   EFTAMGGYLT  DSGEVLLDRV  EHFIQAVAAN  EDKIFQKRTR  IKQSMENNEE  MKQRSRRDPS  420
421   EIPPEPIEDK  IKLGEPGYKE  RYYAEKFSTT  NPEEIEQIKQ  DMVLKYVEGL  CWVCRYYYQG  480
481   VCSWQWFYPY  HYAPFASDLK  NLSDLEITFF  IGEPFKPFDQ  LMGTLPAASS  NALPGEYRKL  540
541   MTDPSSPILK  FYPSDFEIDM  NGKRFSWQGI  AKLPFIEEKL  LLASTRKLEE  TLTVEERQRN  600
601   SVMLDLLYVH  PTHPLGQRVM  QYYHFYHQLP  PNECLPWMID  PNASQGMNGF  LWFSERNGFQ  660
661   TRVVSPVNGF  PCIEQNRALN  VTYLNPAKHS  HIPEPPRGAI  IPDKILTPAD  IKPFPALWHE  720
721   DNSNRRRQAR  DRPQVAGAIA  GHSLGEAAHR  LIKNTLNMKS  STGSASGLID  PNSYNRNIPG  780
781   NYHYGGPRAA  GSSSYRKSYG  DDSSYYYSGK  YNNSSQGMYS  NGPRYPGPSP  DYNRNYYNNS  840
841   KMVVKQPNRG  GIRTGSSVED  NGRSKQLYSS  YTEAANANIN  NPLPSPPTQW  LGAPQGGNFS  900
901   GGYYREGGVG  YGEMNGKKVI  YQPKAQQSQP  GFNE  934
Nucleotide CDS Sequence (FASTA)
1     ATGGGAGTTC  CAGCGTTCTA  CAGATGGCTC  GCCGACCGAT  ACCCCAAGTC  AATTAGCGAC  60
61    GTCGTTGAGG  AAGAATCGGG  TCTTGGTGCC  CTAGATATCA  CCAGACCTAA  CCCTAACGGA  120
121   TTCGAATTTG  ATAATTTGTA  CCTCGACATG  AACGGTATCA  TCCATCCCTG  TTTCCATCCT  180
181   GAAGGAAAGC  ATGCACCTGC  CACATACGAT  GATGTATTCA  AATCAATGTT  CGAGTACATT  240
241   GACCATCTAT  TTACTTTAGT  GCGTCCCAGG  AAGCTTCTTT  ACTTGGCTAT  AGATGGAGTT  300
301   GCACCAAGAG  CAAAGATGAA  TCAGCAGCGT  TCTCGGCGAT  TCAGAGCTGC  AAAGGACGCA  360
361   GCAGAGGCTG  AAGCTGAGGA  AGAGATGTTG  AGACAAGATT  TTGAGATTGG  GGGGCAAATC  420
421   TTGTCTGCTA  AAGAGAAGGC  AGAAACCTCT  GATTCAAATG  TCATTACTCC  TGGGACCCCG  480
481   TTTATGGCTG  TGCTCTCAGT  AGCTCTTCAG  TATTACATAC  AGTCTAGGTT  AAATCGTAAC  540
541   CCTGGTTGGA  GATTTGTTAA  GGTGATTCTC  TCTGATTCAA  ATGTTCCGGG  GGAAGGAGAA  600
601   CACAAGATAA  TGTCATACAT  TCGTCTACAA  CGTGGTCTTC  CTGGTTTCGA  TCCAAATACA  660
661   CGGCATTGTC  TATACGGTCT  GGATGCAGAT  TTGATAATGC  TCTCTCTAGC  CACACATGAA  720
721   GTTCACTTTT  CAATCTTAAG  AGAGGTTATC  GCTTACCCTG  GCCAACAAGA  GAAATGTTTT  780
781   GTGTGTGGAC  AAACTGGTCA  TTTTGCTGCA  GATTGCCCTG  GAAAATCAGG  TATCCCAAAT  840
841   GCAGCATCTG  ATATTCCAAT  CCACAAGAAA  AAATATCAGT  TCCTGAACAT  CTGGGTGCTG  900
901   CGAGAATATC  TGCAATATGA  ATTGGCCATC  CCAGATCCTC  CTTTCACCAT  CAACTTCGAG  960
961   AGAATTATTG  ATGACTTTGT  ATTCCTTTGC  TTCTTTGTTG  GCAATGATTT  CCTGCCTCAT  1020
1021  ATGCCTACAT  TAGAAATTCG  AGAGGGGGCT  ATAAACTTGC  TGATGCATGT  TTACAGAAAG  1080
1081  GAATTTACAG  CTATGGGAGG  CTATCTAACT  GATTCTGGTG  AGGTTTTGCT  AGATAGGGTA  1140
1141  GAGCATTTCA  TTCAAGCTGT  CGCGGCAAAT  GAAGATAAAA  TATTTCAGAA  AAGGACGCGG  1200
1201  ATAAAACAGT  CAATGGAAAA  CAATGAAGAA  ATGAAACAAA  GATCAAGAAG  AGACCCATCT  1260
1261  GAAATACCAC  CTGAACCGAT  AGAGGATAAG  ATTAAGCTGG  GAGAGCCCGG  CTACAAGGAG  1320
1321  AGGTATTATG  CTGAGAAATT  TAGTACGACC  AATCCAGAGG  AAATTGAGCA  AATCAAACAA  1380
1381  GACATGGTAC  TAAAATATGT  TGAAGGTTTG  TGCTGGGTTT  GCCGGTACTA  CTACCAAGGT  1440
1441  GTATGCTCTT  GGCAATGGTT  TTACCCATAC  CATTATGCCC  CATTTGCTTC  AGATCTTAAG  1500
1501  AATCTATCTG  ATTTGGAAAT  CACATTTTTC  ATTGGAGAGC  CCTTTAAACC  TTTTGATCAG  1560
1561  TTAATGGGAA  CCCTGCCGGC  TGCAAGCTCA  AACGCTTTGC  CTGGAGAATA  CCGGAAGTTG  1620
1621  ATGACTGATC  CCTCATCTCC  GATCCTGAAA  TTTTACCCTT  CTGATTTTGA  GATTGACATG  1680
1681  AATGGAAAGC  GCTTCTCTTG  GCAGGGTATT  GCGAAACTTC  CTTTCATTGA  GGAGAAGTTA  1740
1741  TTGTTAGCAT  CTACAAGGAA  GCTTGAAGAA  ACGCTAACGG  TGGAAGAACG  GCAACGCAAC  1800
1801  AGCGTGATGC  TTGATTTGTT  ATACGTACAC  CCCACTCATC  CACTGGGCCA  GCGGGTTATG  1860
1861  CAGTACTACC  ACTTCTACCA  CCAGTTGCCA  CCAAATGAAT  GTCTTCCATG  GATGATTGAC  1920
1921  CCGAATGCTA  GCCAAGGGAT  GAACGGTTTT  CTGTGGTTTA  GTGAAAGGAA  CGGTTTTCAA  1980
1981  ACTAGAGTTG  TTTCCCCTGT  CAATGGCTTC  CCATGCATTG  AGCAGAACCG  AGCCTTAAAT  2040
2041  GTTACATACT  TGAATCCTGC  CAAACATTCT  CATATCCCAG  AACCACCAAG  AGGAGCTATC  2100
2101  ATTCCGGACA  AGATCTTGAC  GCCAGCAGAT  ATAAAGCCAT  TTCCTGCTTT  ATGGCACGAA  2160
2161  GACAATAGCA  ACCGACGCCG  ACAAGCCCGA  GATAGACCAC  AAGTGGCTGG  TGCTATAGCC  2220
2221  GGGCATTCAC  TGGGAGAAGC  AGCTCATCGT  CTGATCAAAA  ACACCCTTAA  TATGAAATCT  2280
2281  TCCACTGGTT  CGGCTTCAGG  ATTAATTGAC  CCGAACTCAT  ACAACCGAAA  TATACCGGGT  2340
2341  AATTATCATT  ACGGTGGACC  AAGAGCAGCG  GGTTCCTCTT  CTTACAGGAA  ATCATATGGC  2400
2401  GATGACTCGA  GCTACTACTA  TTCCGGAAAG  TATAACAATA  GCTCTCAAGG  AATGTACAGC  2460
2461  AACGGTCCGA  GATATCCTGG  TCCATCACCA  GACTATAACC  GGAACTACTA  CAACAACTCC  2520
2521  AAGATGGTAG  TAAAACAACC  GAACCGTGGT  GGAATCAGAA  CTGGTTCATC  GGTAGAAGAT  2580
2581  AACGGCAGAA  GCAAACAATT  GTATTCAAGC  TATACAGAAG  CTGCTAATGC  AAATATCAAC  2640
2641  AACCCATTGC  CATCACCGCC  AACACAATGG  CTTGGTGCAC  CGCAAGGTGG  GAATTTCAGC  2700
2701  GGTGGATACT  ATAGGGAAGG  AGGAGTTGGC  TATGGTGAGA  TGAATGGAAA  GAAAGTGATT  2760
2761  TATCAGCCCA  AGGCACAGCA  AAGTCAGCCA  GGCTTTAATG  AATGA  2805

▼ KEYWORD

ID
Family
Complete proteome
Exonuclease
Hydrolase
Metal-binding
mRNA processing
Nuclease
Reference proteome
Zinc
Zinc-finger

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Cytoplasmic stress granule
Cellular Component
Cytosol
Cellular Component
Nucleus
Cellular Component
P-body
Cellular Component
Polysome
Molecular Function
5'-3' exoribonuclease activity
Molecular Function
MRNA binding
Molecular Function
Zinc ion binding
Biological Process
Cell division
Biological Process
Cellular heat acclimation
Biological Process
Deadenylation-independent decapping of nuclear-transcribed mRNA
Biological Process
MiRNA catabolic process
Biological Process
MRNA processing
Biological Process
Nuclear-transcribed mRNA catabolic process, exonucleolytic
Biological Process
Phloem or xylem histogenesis
Biological Process
Regulation of gene expression, epigenetic
Biological Process
Unidimensional cell growth

▼ KEGG


▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Brn-0355Brassica napus98.070.01750
LLPS-Brr-2673Brassica rapa97.320.01739
LLPS-Art-1044Arabidopsis thaliana87.170.01563
LLPS-Dac-2380Daucus carota75.80.0 697
LLPS-Prp-1358Prunus persica75.440.01200
LLPS-Via-2370Vigna angularis74.030.01146
LLPS-Viv-0995Vitis vinifera73.310.01019
LLPS-Cus-0737Cucumis sativus72.770.01126
LLPS-Glm-1782Glycine max71.750.01142
LLPS-Sob-1087Sorghum bicolor71.60.0 566
LLPS-Sei-1491Setaria italica71.360.0 566
LLPS-Met-0962Medicago truncatula71.30.01128
LLPS-Orni-2203Oryza nivara71.30.01096
LLPS-Orr-0768Oryza rufipogon71.30.01096
LLPS-Ors-0413Oryza sativa71.30.01096
LLPS-Amt-0542Amborella trichopoda71.291e-138 437
LLPS-Orgl-2258Oryza glumaepatula71.170.01095
LLPS-Orb-1209Oryza barthii71.170.01093
LLPS-Lep-1756Leersia perrieri70.870.0 572
LLPS-Brd-1195Brachypodium distachyon70.870.0 563
LLPS-Zem-0080Zea mays70.870.0 562
LLPS-Mua-2170Musa acuminata70.850.0 591
LLPS-Coc-0228Corchorus capsularis70.70.0 575
LLPS-Tra-0561Triticum aestivum70.633e-180 557
LLPS-Ori-0344Oryza indica70.630.0 562
LLPS-Orm-0043Oryza meridionalis70.630.0 562
LLPS-Org-0802Oryza glaberrima70.630.0 562
LLPS-Orp-1087Oryza punctata70.630.0 562
LLPS-Orbr-2246Oryza brachyantha70.40.01070
LLPS-Hov-0914Hordeum vulgare70.380.0 972
LLPS-Thc-1863Theobroma cacao70.360.01202
LLPS-Sol-0134Solanum lycopersicum70.350.01141
LLPS-Tru-0596Triticum urartu70.220.01071
LLPS-Vir-1221Vigna radiata70.040.01068
LLPS-Nia-1324Nicotiana attenuata69.730.0 586
LLPS-Pot-1019Populus trichocarpa69.490.0 577
LLPS-Gor-0675Gossypium raimondii69.490.0 563
LLPS-Phv-1486Phaseolus vulgaris69.410.01117
LLPS-Mae-1238Manihot esculenta69.250.0 565
LLPS-Hea-0436Helianthus annuus68.770.0 562
LLPS-Sot-0181Solanum tuberosum68.523e-179 556
LLPS-Php-0128Physcomitrella patens66.90.0 574
LLPS-Arl-0747Arabidopsis lyrata63.373e-167 523
LLPS-Chr-1612Chlamydomonas reinhardtii59.611e-144 469
LLPS-Gas-0233Galdieria sulphuraria58.823e-1790.9
LLPS-Lac-1188Latimeria chalumnae56.62e-126 411
LLPS-Tar-3110Takifugu rubripes56.131e-137 443
LLPS-Gaga-0456Gallus gallus56.131e-139 447
LLPS-Urm-1966Ursus maritimus55.942e-125 410
LLPS-Anp-0686Anas platyrhynchos55.875e-129 419
LLPS-Ten-1284Tetraodon nigroviridis55.852e-136 439
LLPS-Meg-0402Meleagris gallopavo55.584e-136 438
LLPS-Ova-1478Ovis aries55.536e-126 410
LLPS-Otg-1278Otolemur garnettii55.423e-136 439
LLPS-Xet-0285Xenopus tropicalis55.395e-135 436
LLPS-Pes-0002Pelodiscus sinensis55.372e-115 379
LLPS-Osl-0382Ostreococcus lucimarinus55.298e-139 441
LLPS-Anc-1795Anolis carolinensis55.234e-124 406
LLPS-Cas-1851Carlito syrichta55.184e-135 436
LLPS-Loa-1408Loxodonta africana55.185e-136 438
LLPS-Icp-2235Ictalurus punctatus55.165e-137 441
LLPS-Ora-1406Ornithorhynchus anatinus55.151e-133 432
LLPS-Asm-2211Astyanax mexicanus55.154e-135 437
LLPS-Fia-1750Ficedula albicollis55.156e-138 443
LLPS-Bot-1821Bos taurus54.941e-134 434
LLPS-Dio-0262Dipodomys ordii54.942e-135 436
LLPS-Myl-0799Myotis lucifugus54.942e-135 436
LLPS-Aim-0452Ailuropoda melanoleuca54.943e-135 436
LLPS-Mup-1457Mustela putorius furo54.942e-134 436
LLPS-Sus-1479Sus scrofa54.942e-135 436
LLPS-Aon-3127Aotus nancymaae54.942e-135 436
LLPS-Caj-0137Callithrix jacchus54.941e-135 437
LLPS-Fud-1565Fukomys damarensis54.944e-135 436
LLPS-Cap-0449Cavia porcellus54.942e-135 436
LLPS-Eqc-3488Equus caballus54.941e-134 435
LLPS-Caf-1749Canis familiaris54.942e-135 436
LLPS-Ict-1693Ictidomys tridecemlineatus54.942e-135 437
LLPS-Fec-2832Felis catus54.943e-135 436
LLPS-Orc-0297Oryctolagus cuniculus54.943e-135 436
LLPS-Scf-0771Scleropages formosus54.91e-135 437
LLPS-Gaa-0902Gasterosteus aculeatus54.94e-136 434
LLPS-Xim-1329Xiphophorus maculatus54.91e-134 435
LLPS-Orn-3066Oreochromis niloticus54.92e-133 432
LLPS-Paa-1097Papio anubis54.72e-134 434
LLPS-Ran-1278Rattus norvegicus54.72e-134 434
LLPS-Leo-2675Lepisosteus oculatus54.71e-134 434
LLPS-Cea-1282Cercocebus atys54.71e-134 434
LLPS-Chs-0124Chlorocebus sabaeus54.71e-134 434
LLPS-Mum-1459Mus musculus54.71e-134 434
LLPS-Maf-1826Macaca fascicularis54.71e-134 434
LLPS-Mea-1960Mesocricetus auratus54.71e-134 434
LLPS-Gog-2258Gorilla gorilla54.71e-134 434
LLPS-Mam-0738Macaca mulatta54.71e-134 434
LLPS-Poa-0647Pongo abelii54.71e-134 434
LLPS-Nol-0076Nomascus leucogenys54.71e-134 434
LLPS-Man-0165Macaca nemestrina54.71e-134 434
LLPS-Hos-0105Homo sapiens54.71e-134 434
LLPS-Pap-0290Pan paniscus54.71e-134 434
LLPS-Pat-0967Pan troglodytes54.71e-134 434
LLPS-Rhb-0991Rhinopithecus bieti54.75e-136 434
LLPS-Orl-0269Oryzias latipes54.684e-136 439
LLPS-Pof-2316Poecilia formosa54.665e-135 436
LLPS-Scm-2179Scophthalmus maximus54.411e-133 433
LLPS-Dar-2002Danio rerio54.229e-136 437
LLPS-Mod-0212Monodelphis domestica53.731e-133 432
LLPS-Tag-1688Taeniopygia guttata53.417e-127 414
LLPS-Mal-1665Mandrillus leucophaeus52.641e-123 405
LLPS-Cae-0124Caenorhabditis elegans52.611e-132 430
LLPS-Miv-0213Microbotryum violaceum52.414e-46 184
LLPS-Usm-0261Ustilago maydis52.32e-131 432
LLPS-Mel-1180Melampsora laricipopulina52.262e-90 300
LLPS-Cis-1147Ciona savignyi52.124e-129 418
LLPS-Spr-0847Sporisorium reilianum52.092e-131 433
LLPS-Cii-0076Ciona intestinalis51.541e-129 418
LLPS-Put-0790Puccinia triticina51.466e-128 421
LLPS-Pug-0272Puccinia graminis51.224e-128 423
LLPS-Kop-0812Komagataella pastoris50.833e-53 205
LLPS-Trr-0786Trichoderma reesei50.231e-128 420
LLPS-Aso-0088Aspergillus oryzae50.127e-133 432
LLPS-Asf-0292Aspergillus flavus50.127e-133 432
LLPS-Crn-0446Cryptococcus neoformans50.126e-128 421
LLPS-Asni-0109Aspergillus niger50.125e-129 422
LLPS-Asfu-0929Aspergillus fumigatus50.122e-130 426
LLPS-Abg-0390Absidia glauca49.771e-120 400
LLPS-Asc-0672Aspergillus clavatus49.777e-130 424
LLPS-Asn-0397Aspergillus nidulans49.772e-129 423
LLPS-Nef-0198Neosartorya fischeri49.657e-129 422
LLPS-Scp-0200Schizosaccharomyces pombe49.644e-111 372
LLPS-Nec-0239Neurospora crassa49.643e-127 417
LLPS-Fuv-0515Fusarium verticillioides49.619e-120 394
LLPS-Blg-1118Blumeria graminis49.533e-129 421
LLPS-Ved-0446Verticillium dahliae49.535e-126 413
LLPS-Scc-0543Schizosaccharomyces cryophilus49.416e-110 369
LLPS-Beb-0321Beauveria bassiana49.36e-130 422
LLPS-Lem-0475Leptosphaeria maculans49.185e-119 396
LLPS-Fuo-0878Fusarium oxysporum49.187e-134 422
LLPS-Ast-1113Aspergillus terreus49.184e-130 424
LLPS-Scj-1171Schizosaccharomyces japonicus49.051e-110 370
LLPS-Cogr-0647Colletotrichum graminicola48.833e-120 397
LLPS-Pyt-1204Pyrenophora teres48.742e-121 398
LLPS-Pytr-1362Pyrenophora triticirepentis48.748e-120 398
LLPS-Mao-1232Magnaporthe oryzae48.66e-126 413
LLPS-Phn-0798Phaeosphaeria nodorum48.511e-120 399
LLPS-Coo-0596Colletotrichum orbiculare48.036e-119 389
LLPS-Cog-0753Colletotrichum gloeosporioides48.031e-115 398
LLPS-Map-0267Magnaporthe poae47.672e-125 412
LLPS-Gag-0989Gaeumannomyces graminis47.446e-125 411
LLPS-Sac-1194Saccharomyces cerevisiae47.339e-112 374
LLPS-Asg-0110Ashbya gossypii45.975e-110 368
LLPS-Scs-0291Sclerotinia sclerotiorum44.763e-103 349
LLPS-Drm-0592Drosophila melanogaster44.470.0 597
LLPS-Yal-0893Yarrowia lipolytica43.478e-102 347
LLPS-Tum-0484Tuber melanosporum43.190.0 554
LLPS-Sah-0013Sarcophilus harrisii38.666e-122 412
LLPS-Cym-0545Cyanidioschyzon merolae37.756e-130 419
LLPS-Chc-1101Chondrus crispus36.693e-87 309