Oryza sativa      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 341 genes.  Reviewed (0 or Unreviewed (341

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ors-2150
Os05g0566500
2
LLPS-Ors-0631
Os03g0347200
Q10LJ0
ABH1
3
LLPS-Ors-0551
Os10g0363300
Q8S6N5
ACC1
4
LLPS-Ors-1503
Os04g0566500
Q7XSA2
AGO1B
5
LLPS-Ors-1272
Os01g0549700
Q0JM17
AIP1
6
LLPS-Ors-1120
Os07g0512200
Q69RC4
ATG8A
7
LLPS-Ors-0710
Os07g0616600
Q8H3I3
B1056G08.113
8
LLPS-Ors-0923
Os02g0115900
Q6Z7B0
BIP1
9
LLPS-Ors-0501
Os03g0343500
Q762A6
bip108
10
LLPS-Ors-0325
Os07g0435400
Q0D6V7
BOP1
11
LLPS-Ors-1475
Os05g0491100
Q6F332
CAM2
12
LLPS-Ors-1330
Os02g0612300
Q84L14
CBP20
13
LLPS-Ors-1285
Os01g0856000
Q5N897
CDC6
14
LLPS-Ors-0422
Os02g0123100
P29619
CDKA-2
15
LLPS-Ors-2037
Os03g0146300
Q6PS57
CKS1
16
LLPS-Ors-1471
Os05g0519700
Q6F2Y7
CLPB1
17
LLPS-Ors-0296
Os04g0563700
Q7XSJ6
CYCB2-1
18
LLPS-Ors-0734
Os03g0725300
Q6AU07
DBR1
19
LLPS-Ors-0077
Os05g0279400
Q0DJH5
EBR1
20
LLPS-Ors-0672
Os06g0342200
Q7Y1V2
eif-1a-OF2
21
LLPS-Ors-0932
Os08g0108200
Q6ZD63
FAS2
22
LLPS-Ors-1482
Os05g0540100
Q9SXQ6
FEN1A
23
LLPS-Ors-1586
Os10g0415900
Q338B9
GCN5
24
LLPS-Ors-1265
Os02g0527300
Q6H6Q7
HSFA3
25
LLPS-Ors-1662
Os06g0158600
Q5VMX2
KMK0024M20.35
26
LLPS-Ors-0727
Os03g0109600
Q84VF8
LOC_Os03g01910
27
LLPS-Ors-0181
Os03g0123300
Q10SH0
LOC_Os03g03150
28
LLPS-Ors-1048
Os03g0151700
Q10RP1
LOC_Os03g05720
29
LLPS-Ors-0321
Os03g0151800
Q10RP0
LOC_Os03g05730
30
LLPS-Ors-1694
Os03g0166800
Q10R99
LOC_Os03g07080
31
LLPS-Ors-0179
Os03g0182600
Q10QU9
LOC_Os03g08440
32
LLPS-Ors-0977
Os03g0198400
Q10QF5
LOC_Os03g10190
33
LLPS-Ors-1858
Os03g0207300
Q10Q71
LOC_Os03g10940
34
LLPS-Ors-0358
Os03g0251500
Q10P12
LOC_Os03g14690
35
LLPS-Ors-0914
Os03g0295400
Q10MU2
LOC_Os03g18410
36
LLPS-Ors-1533
Os03g0312600
Q10MD7
LOC_Os03g19870
37
LLPS-Ors-1163
Os03g0339100
Q10LQ8
LOC_Os03g21990
38
LLPS-Ors-1278
Os03g0341100
Q10LN7
LOC_Os03g22180
39
LLPS-Ors-0516
Os03g0343300
Q10LM2
LOC_Os03g22320
40
LLPS-Ors-1107
Os03g0343700
Q10LL9
LOC_Os03g22350
41
LLPS-Ors-0609
Os03g0389900
Q75LR4
LOC_Os03g27250
42
LLPS-Ors-1398
Os03g0396900
Q94LF9
LOC_Os03g27930
43
LLPS-Ors-2218
Os03g0648400
Q84PD0
LOC_Os03g44620
44
LLPS-Ors-0022
Os03g0694900
Q851K9
LOC_Os03g48850
45
LLPS-Ors-1106
Os03g0725400
Q10DN8
LOC_Os03g51550
46
LLPS-Ors-0854
Os03g0807800
Q84M35
LOC_Os03g59310
47
LLPS-Ors-0919
Os03g0833700
Q75LH9
LOC_Os03g61790
48
LLPS-Ors-1775
Os03g0841800
Q6AVQ3
LOC_Os03g62500
49
LLPS-Ors-1846
Os03g0852900
Q84JJ2
LOC_Os03g63590
50
LLPS-Ors-1555
Os03g0854300
Q84T66
LOC_Os03g63730
51
LLPS-Ors-0683
Os10g0182000
Q10A14
LOC_Os10g10244
52
LLPS-Ors-0301
Os10g0183900
Q10A12
LOC_Os10g10434
53
LLPS-Ors-1408
Os10g0412100
Q338D5
LOC_Os10g27230
54
LLPS-Ors-1612
Os10g0476100
Q9AUZ4
LOC_Os10g33640
55
LLPS-Ors-0955
Os10g0488100
Q7XD74
LOC_Os10g34670
56
LLPS-Ors-1760
Os10g0533000
Q8LN38
LOC_Os10g38900
57
LLPS-Ors-0044
Os10g0564900
Q336R6
LOC_Os10g41520
58
LLPS-Ors-0106
Os10g0569200
Q8S7Q0
LOC_Os10g41960
59
LLPS-Ors-2308
Os10g0573900
Q336P7
LOC_Os10g42320
60
LLPS-Ors-0546
Os11g0106400
Q2RBM4
LOC_Os11g01510
61
LLPS-Ors-0141
Os11g0136800
Q2RAU9
LOC_Os11g04180
62
LLPS-Ors-0540
Os11g0298400
Q53MQ7
LOC_Os11g19250
63
LLPS-Ors-2388
Os03g0773150
Q7XZX4
LOC_Os11g41610
64
LLPS-Ors-0282
Os11g0672700
Q2QZT4
LOC_Os11g44910
65
LLPS-Ors-0575
Os11g0707700
Q53NW5
LOC_Os11g48030
66
LLPS-Ors-0753
Os12g0133900
Q2QY33
LOC_Os12g04010
67
LLPS-Ors-0526
Os12g0156400
Q2QXH6
LOC_Os12g06020
68
LLPS-Ors-0320
Os12g0194700
Q2QWI0
LOC_Os12g09280
69
LLPS-Ors-0950
Os12g0403800
Q2QT85
LOC_Os12g21500
70
LLPS-Ors-0920
Os12g0485800
Q2QQS1
LOC_Os12g30060
71
LLPS-Ors-2270
Os12g0497400
Q2QQD9
LOC_Os12g31380
72
LLPS-Ors-1697
Os04g0445800
Q0JCW8
LSM1
73
LLPS-Ors-0820
Os12g0287200
P49030
MAGO2
74
LLPS-Ors-0054
Os11g0484300
Q2R482
MCM2
75
LLPS-Ors-0503
Os01g0544450
Q5JKB0
MCM4
76
LLPS-Ors-1468
Os02g0797400
Q6KAJ4
MCM5
77
LLPS-Ors-0299
Os12g0560700
Q2QNM1
MCM7
78
LLPS-Ors-2268
Os01g0976000
Q5JL08
MON1
79
LLPS-Ors-1527
Os06g0154500
Q84UI5
MPK1
80
LLPS-Ors-0100
Os03g0285800
Q10N20
MPK5
81
LLPS-Ors-1844
Os04g0440000
Q7XQG4
OJ000114_01.13
82
LLPS-Ors-1311
Os07g0450000
Q8H5N0
OJ1047_A06.130
83
LLPS-Ors-2058
Os07g0495100
Q84RS4
OJ1058_B11.121
84
LLPS-Ors-0924
Os03g0123100
Q8H8G9
OJ1126B12.12
85
LLPS-Ors-0220
Os07g0636000
Q8H5T5
OJ1136_D11.103
86
LLPS-Ors-0656
Os07g0639800
Q8GVF5
OJ1340_C08.131
87
LLPS-Ors-0970
Os07g0208000
Q84ZP1
OJ1559_F09.109
88
LLPS-Ors-0097
Os07g0575100
Q6ZL37
OJ1562_B11.122
89
LLPS-Ors-2070
Os07g0463100
Q8LI69
OJ1634_H04.114
90
LLPS-Ors-0536
Os01g0834500
Q8L4F2
OJ1754_E06.3
91
LLPS-Ors-1661
Os02g0105200
Q6YPG2
OJA1212_C06.23
92
LLPS-Ors-0737
Os01g0109300
A0A0P0UXJ0
Os01g0109300
93
LLPS-Ors-1488
Os01g0111200
Q657T0
Os01g0111200
94
LLPS-Ors-2022
Os01g0164400
A0A0P0UYN0
Os01g0164400
95
LLPS-Ors-0987
Os01g0179200
Q9LGF8
Os01g0179200
96
LLPS-Ors-0803
Os01g0186700
Q5SNF8
Os01g0186700
97
LLPS-Ors-2271
Os01g0200000
Q8LRF5
Os01g0200000
98
LLPS-Ors-0043
Os01g0239100
Q9FTT4
Os01g0239100
99
LLPS-Ors-0985
Os01g0256400
Q9SDK0
Os01g0256400
100
LLPS-Ors-0462
Os01g0375000
Q5ZCV4
Os01g0375000
101
LLPS-Ors-1523
Os01g0526100
Q8L460
Os01g0526100
102
LLPS-Ors-0218
Os01g0610100
Q9AX79
Os01g0610100
103
LLPS-Ors-0140
Os01g0616900
A0A0P0V5B4
Os01g0616900
104
LLPS-Ors-1036
Os01g0659200
Q8SA35
Os01g0659200
105
LLPS-Ors-0948
Os01g0661400
Q0JKN6
Os01g0661400
106
LLPS-Ors-1599
Os01g0685200
A2ZWM2
Os01g0685200
107
LLPS-Ors-1368
Os01g0723200
Q8W0C2
Os01g0723200
108
LLPS-Ors-0154
Os01g0746200
Q8LIZ0
Os01g0746200
109
LLPS-Ors-0178
Os01g0788200
Q8RU32
Os01g0788200
110
LLPS-Ors-0206
Os01g0844800
Q0JHT2
Os01g0844800
111
LLPS-Ors-2117
Os01g0876100
A0A0P0VB46
Os01g0876100
112
LLPS-Ors-1994
Os01g0889000
Q5N842
Os01g0889000
113
LLPS-Ors-1063
Os01g0904400
Q5N6W1
Os01g0904400
114
LLPS-Ors-0617
Os01g0915400
A0A0P0VBZ2
Os01g0915400
115
LLPS-Ors-1259
Os01g0916800
A0A0P0VC44
Os01g0916800
116
LLPS-Ors-0038
Os01g0918200
Q8RZU9
Os01g0918200
117
LLPS-Ors-0322
Os01g0970400
P48599
Os01g0970400
118
LLPS-Ors-0361
Os02g0159900
Q6ETH5
Os02g0159900
119
LLPS-Ors-1371
Os02g0235600
Q0E2I8
Os02g0235600
120
LLPS-Ors-0212
Os02g0246300
Q0E2E9
Os02g0246300
121
LLPS-Ors-1881
Os02g0266100
Q6ETX3
Os02g0266100
122
LLPS-Ors-1267
Os02g0295700
Q6K5B7
Os02g0295700
123
LLPS-Ors-1373
Os02g0325100
Q6Z875
Os02g0325100
124
LLPS-Ors-0937
Os02g0489550
A0A0P0VJ70
Os02g0489550
125
LLPS-Ors-2088
Os02g0503400
Q6K667
Os02g0503400
126
LLPS-Ors-0203
Os02g0523500
Q6H547
Os02g0523500
127
LLPS-Ors-2306
Os02g0529500
Q6H766
Os02g0529500
128
LLPS-Ors-2263
Os02g0550100
Q6Z0Z9
Os02g0550100
129
LLPS-Ors-1977
Os02g0554000
A0A0P0VK92
Os02g0554000
130
LLPS-Ors-0439
Os02g0586500
Q6YY16
Os02g0586500
131
LLPS-Ors-0392
Os02g0591800
Q69L77
Os02g0591800
132
LLPS-Ors-1232
Os02g0593900
Q0DZX1
Os02g0593900
133
LLPS-Ors-0759
Os02g0596100
A0A0P0VL78
Os02g0596100
134
LLPS-Ors-1483
Os02g0618250
B9F144
Os02g0618250
135
LLPS-Ors-1254
Os02g0625500
Q0DZE5
Os02g0625500
136
LLPS-Ors-0377
Os02g0641800
Q6H7S2
Os02g0641800
137
LLPS-Ors-2313
Os02g0689800
A0A0P0VNC6
Os02g0689800
138
LLPS-Ors-0032
Os02g0699600
Q6Z8E0
Os02g0699600
139
LLPS-Ors-0967
Os02g0702500
A0A0N7KFY1
Os02g0702500
140
LLPS-Ors-1392
Os02g0730500
Q6YWQ2
Os02g0730500
141
LLPS-Ors-0883
Os02g0736600
Q6Z742
Os02g0736600
142
LLPS-Ors-0553
Os02g0772000
A0A0P0VPZ7
Os02g0772000
143
LLPS-Ors-1445
Os02g0774500
Q0DX49
Os02g0774500
144
LLPS-Ors-0578
Os02g0782200
Q6K7F1
Os02g0782200
145
LLPS-Ors-1554
Os02g0788400
Q6K4P1
Os02g0788400
146
LLPS-Ors-2250
Os02g0791800
Q6K9M2
Os02g0791800
147
LLPS-Ors-0643
Os02g0804100
Q6K853
Os02g0804100
148
LLPS-Ors-2001
Os02g0812400
Q6K3F7
Os02g0812400
149
LLPS-Ors-0064
Os02g0822300
A0A0P0VRQ0
Os02g0822300
150
LLPS-Ors-1644
Os02g0824700
Q6KAA4
Os02g0824700
151
LLPS-Ors-1230
Os03g0118800
A3ADI5
Os03g0118800
152
LLPS-Ors-1034
Os03g0129200
A0A0N7KGI5
Os03g0129200
153
LLPS-Ors-0591
Os03g0221800
A0A0P0VUV4
Os03g0221800
154
LLPS-Ors-0878
Os03g0281600
Q0DSY0
Os03g0281600
155
LLPS-Ors-0810
Os03g0293400
A0A0P0VWB2
Os03g0293400
156
LLPS-Ors-0832
Os03g0333100
Q0DS53
Os03g0333100
157
LLPS-Ors-1884
Os03g0341200
A0A0P0VX92
Os03g0341200
158
LLPS-Ors-1177
Os03g0418800
A0A0P0VYT3
Os03g0418800
159
LLPS-Ors-1160
Os03g0586800
Q6F2U9
Os03g0586800
160
LLPS-Ors-0538
Os03g0647500
A0A0P0W1J0
Os03g0647500
161
LLPS-Ors-0959
Os03g0686300
A0A0P0W1J8
Os03g0686300
162
LLPS-Ors-1088
Os03g0738000
Q0DNR7
Os03g0738000
163
LLPS-Ors-0192
Os03g0802700
Q84T03
Os03g0802700
164
LLPS-Ors-1672
Os04g0118400
Q7XTK1
Os04g0118400
165
LLPS-Ors-0642
Os04g0118500
Q7XTK0
Os04g0118500
166
LLPS-Ors-1975
Os04g0271000
Q7XWV4
Os04g0271000
167
LLPS-Ors-2085
Os04g0382700
Q7XVC4
Os04g0382700
168
LLPS-Ors-0350
Os04g0433800
A0A0P0WAF3
Os04g0433800
169
LLPS-Ors-1366
Os04g0484800
Q0JC96
Os04g0484800
170
LLPS-Ors-1099
Os04g0485300
Q7X7I6
Os04g0485300
171
LLPS-Ors-0624
Os04g0499200
Q0JC05
Os04g0499200
172
LLPS-Ors-0167
Os04g0502300
Q0JBY8
Os04g0502300
173
LLPS-Ors-0769
Os04g0504800
Q7F8Y1
Os04g0504800
174
LLPS-Ors-0223
Os04g0533000
Q7XMK8
Os04g0533000
175
LLPS-Ors-2042
Os04g0559800
Q7XUR1
Os04g0559800
176
LLPS-Ors-2123
Os04g0574600
Q0JAV4
Os04g0574600
177
LLPS-Ors-0471
Os04g0577000
A0A0P0WDV8
Os04g0577000
178
LLPS-Ors-0629
Os04g0630000
Q0J9V2
Os04g0630000
179
LLPS-Ors-0964
Os04g0641000
A0A0P0WFD3
Os04g0641000
180
LLPS-Ors-0993
Os04g0647300
A0A0P0WFP5
Os04g0647300
181
LLPS-Ors-0506
Os04g0685100
Q7XPU3
Os04g0685100
182
LLPS-Ors-0752
Os05g0104800
Q75M19
Os05g0104800
183
LLPS-Ors-0528
Os05g0144200
B7F9E7
Os05g0144200
184
LLPS-Ors-1730
Os05g0155601
Q9SLX0
Os05g0155601
185
LLPS-Ors-0889
Os05g0235800
Q6F353
Os05g0235800
186
LLPS-Ors-0149
Os05g0256000
Q60EF6
Os05g0256000
187
LLPS-Ors-0585
Os05g0301700
Q0DJC3
Os05g0301700
188
LLPS-Ors-0508
Os05g0310800
Q0DJA0
Os05g0310800
189
LLPS-Ors-2174
Os05g0339000
Q5WMP2
Os05g0339000
190
LLPS-Ors-0945
Os05g0350600
Q0DIY4
Os05g0350600
191
LLPS-Ors-1385
Os05g0373700
Q7XXR8
Os05g0373700
192
LLPS-Ors-1978
Os05g0494900
Q0DH32
Os05g0494900
193
LLPS-Ors-1937
Os05g0498400
Q6L4U9
Os05g0498400
194
LLPS-Ors-1244
Os05g0519400
Q65X08
Os05g0519400
195
LLPS-Ors-1138
Os05g0567400
Q0DFV9
Os05g0567400
196
LLPS-Ors-1963
Os06g0110100
Q8H684
Os06g0110100
197
LLPS-Ors-1522
Os06g0139900
Q5VPF1
Os06g0139900
198
LLPS-Ors-2419
Os06g0153200
B7EL20
Os06g0153200
199
LLPS-Ors-1712
Os06g0153800
Q5VMN4
Os06g0153800
200
LLPS-Ors-0711
Os06g0167000
A0A0P0WSW9
Os06g0167000
201
LLPS-Ors-0214
Os06g0168600
Q5VRF5
Os06g0168600
202
LLPS-Ors-0031
Os06g0173100
Q5SNC0
Os06g0173100
203
LLPS-Ors-1743
Os06g0176000
P0DKK4
Os06g0177100
204
LLPS-Ors-0205
Os06g0186900
Q5SMU8
Os06g0186900
205
LLPS-Ors-1768
Os06g0191200
Q69TJ9
Os06g0191200
206
LLPS-Ors-1154
Os06g0217500
Q69TG3
Os06g0217500
207
LLPS-Ors-1850
Os06g0318200
Q5ZAA9
Os06g0318200
208
LLPS-Ors-1006
Os06g0496000
Q651K5
Os06g0496000
209
LLPS-Ors-1692
Os06g0598900
Q0DB62
Os06g0598900
210
LLPS-Ors-0515
Os06g0608300
Q69V60
Os06g0608300
211
LLPS-Ors-1747
Os06g0608700
Q69V57
Os06g0608700
212
LLPS-Ors-1720
Os06g0622800
Q0DAV8
Os06g0622800
213
LLPS-Ors-2236
Os06g0646500
Q67W57
Os06g0646500
214
LLPS-Ors-1199
Os06g0662000
Q651T8
Os06g0662000
215
LLPS-Ors-0183
Os06g0699900
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