LLPS-Ors-0154
Os01g0746200
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Nuclear pore complex protein Nup85 |
| Gene Name: | Os01g0746200, OSJNBa0014K08.33-1, OSNPB_010746200 |
| Ensembl Gene: | Os01g0746200 |
| Ensembl Protein: | Os01t0746200-02 |
| Organism: | Oryza sativa |
| Taxa ID: | 39947 |
| LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nuclear pore complex, Nucleolus, Centrosome/Spindle pole body, P-body | Predicted from orthologs | (View) |
▼ FUNCTION
| Functions as a component of the nuclear pore complex (NPC). |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Os01t0746200-02 | Os01t0746200-02 |
| Ensembl | Os01t0746200-01 | Os01t0746200-01 |
| UniProt | Q8LIZ0, Q8LIZ0_ORYSJ | |
| GeneBank | AP014957, AP008207, AP003376 | BAC05596.1, BAF06142.1, BAS74318.1 |
| RefSeq | XM_015766467.1 | XP_015621953.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPGMLMDGGG AIVPFSGEPG HAVAAAPPVR NIRHGVAPPI SRVYVSFSSG NLLQVACLRP 60 61 PNPEGGGDRG AEEVSGGRVV EVNLGGGGSG PGGADAEEID EAEMRRIEYG SVPAFALLQS 120 121 RKNALVDGSG MSRLPSVSEH AEWWQYVLEY SKTIGSLLGN PDSLSAYMID DPKMILKVKE 180 181 KPTSLKAAWE LLEIFFVDKQ LQTWLPERLV DWLADYDSLL TKTENTIYRT LINFQKKLIN 240 241 LQVVEDDPDY WSGLSAALSV GWLDIVVNML RFHGSYQLDQ MDSRETENGL VEAVAVLVST 300 301 MPRMRPDLPS GKLGQCCKTR PDFIKALEKW RGQVSKLECS AFWIQCGHQK TRDGLKSLLH 360 361 IMLGNIKNLT ASTSHWLELF ASHLLYIRPF TVGFEGMHQL AQKCIQLKPS ADNSGLTGLL 420 421 TGILSENREV VLAECTKNFG PWMVTHAMEL LTADNDYADM MLHEERPNFG GISIEELHRL 480 481 VYAQVLCSHA LTWQIAPTYL SSCLNQGLGL LEILLLKQPI QDNRVVLKTL EICRLYELEN 540 541 VSTNIMKIAG IYHWKHGRKG TGVYWFQQAN DKVRLDRIAQ QLFEHIGKSV TDDSFKQWEG 600 601 LLELLGSDIG SAGGLEFLHR YRDFKRSLQM AQEGRTGESV RQTVEFLIQL MRNPSTPQRF 660 661 WLPLLHDSVR LLNCKPCPLL NVAETTLLLN KLQELSLAKL RPDFSNIHLP SHALNSVRLA 720 721 LASNLARAIL EEP 733 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTGCTTGC TTCTGATTCT ACTATGTTTT GTCAGGTGGC AATATGTGCT TGAATACAGT 60 61 AAAACCATCG GTAGTCTCCT TGGGAACCCA GATTCTCTTT CTGCTTACAT GATTGATGAC 120 121 CCAAAGATGA TCCTTAAGGT CAAGGAGAAG CCTACTAGTT TAAAGGCTGC GTGGGAGTTG 180 181 CTAGAGATAT TCTTTGTTGA TAAACAGTTG CAAACTTGGC TTCCAGAGCG TCTTGTTGAT 240 241 TGGTTAGCCG ACTATGACAG CCTCTTGACC AAGACAGAGA ACACGATATA TCGCACGCTG 300 301 ATCAATTTCC AGAAAAAGCT CATCAACCTG CAGGTTGTTG AAGATGATCC TGATTATTGG 360 361 AGTGGATTAT CAGCAGCTCT ATCGGTTGGA TGGCTTGATA TTGTGGTGAA TATGCTACGT 420 421 TTTCATGGAT CATACCAATT GGATCAGATG GACAGCCGTG AGACAGAAAA TGGGTTGGTT 480 481 GAAGCTGTTG CTGTTCTTGT GTCAACAATG CCACGCATGC GACCAGATTT GCCATCGGGT 540 541 AAATTAGGCC AGTGTTGTAA AACAAGACCA GATTTTATAA AGGCATTGGA AAAATGGCGA 600 601 GGTCAAGTAA GTAAACTGGA GTGCAGTGCA TTCTGGATTC AGTGCGGTCA CCAAAAAACT 660 661 CGTGATGGTC TGAAGAGTTT GCTTCATATT ATGTTGGGGA ACATAAAGAA CCTCACTGCT 720 721 TCTACTTCAC ATTGGCTGGA GCTCTTTGCT TCTCATTTAC TTTATATAAG GCCATTCACA 780 781 GTGGGTTTTG AAGGGATGCA TCAGTTAGCA CAAAAGTGCA TACAGCTTAA ACCGTCTGCT 840 841 GACAATAGCG GATTGACAGG CCTCCTTACT GGTATCCTTT CAGAAAATAG AGAGGTTGTC 900 901 TTGGCTGAAT GCACAAAAAA TTTTGGTCCT TGGATGGTCA CACATGCTAT GGAGCTGCTG 960 961 ACTGCTGACA ATGACTATGC GGATATGATG TTGCATGAAG AGAGGCCTAA CTTCGGTGGT 1020 1021 ATAAGCATAG AGGAGCTGCA CAGGCTTGTT TATGCTCAAG TTTTGTGCTC TCATGCTTTA 1080 1081 ACATGGCAGA TTGCACCAAC TTATCTGTCC TCATGTCTAA ACCAAGGCCT AGGGCTGTTG 1140 1141 GAGATTCTGC TTCTGAAGCA ACCCATACAA GATAATCGTG TTGTATTGAA GACTTTGGAA 1200 1201 ATTTGCCGCT TGTATGAGCT GGAGAATGTT AGTACAAATA TCATGAAGAT TGCTGGCATT 1260 1261 TATCATTGGA AACATGGTAG GAAAGGAACT GGAGTTTACT GGTTCCAGCA AGCTAATGAT 1320 1321 AAAGTTCGTC TTGACAGAAT TGCTCAACAA TTATTCGAAC ATATTGGCAA GTCGGTCACA 1380 1381 GATGATAGTT TTAAGCAATG GGAGGGGCTG CTTGAGTTAC TAGGTTCTGA CATCGGTAGT 1440 1441 GCAGGTGGTC TTGAGTTCCT TCACAGGTAC CGAGATTTCA AAAGGTCCCT TCAGATGGCA 1500 1501 CAAGAAGGAA GGACTGGCGA GTCTGTTCGG CAAACCGTGG AGTTTCTTAT ACAGCTGATG 1560 1561 AGAAATCCTT CTACACCTCA ACGTTTCTGG CTACCACTTT TACATGACTC GGTGAGGCTT 1620 1621 CTCAATTGCA AACCCTGCCC ATTGTTAAAT GTTGCTGAAA CGACTTTGTT GCTCAACAAG 1680 1681 CTACAAGAAC TGTCATTGGC CAAACTTCGG CCTGACTTTT CCAACATTCA CCTACCAAGC 1740 1741 CATGCATTGA ACTCCGTCAG ATTAGCTCTA GCATCAAACC TTGCGCGTGC AATTCTTGAA 1800 1801 GAACCTTAA 1809 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nuclear membrane | |
Cellular Component | Nuclear pore outer ring | |
Molecular Function | Structural constituent of nuclear pore | |
Biological Process | MRNA export from nucleus | |
Biological Process | Positive regulation of transcription, DNA-templated | |
Biological Process | Protein import into nucleus | |
Biological Process | Response to abscisic acid |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Orgl-0359 | Oryza glumaepatula | 99.86 | 0.0 | 1408 |
| LLPS-Orr-0735 | Oryza rufipogon | 99.73 | 0.0 | 1406 |
| LLPS-Orb-1590 | Oryza barthii | 99.59 | 0.0 | 1406 |
| LLPS-Orni-0065 | Oryza nivara | 99.45 | 0.0 | 1405 |
| LLPS-Orbr-0177 | Oryza brachyantha | 92.96 | 0.0 | 1168 |
| LLPS-Lep-0308 | Leersia perrieri | 91.47 | 0.0 | 1292 |
| LLPS-Orm-0377 | Oryza meridionalis | 87.72 | 0.0 | 1172 |
| LLPS-Tra-1939 | Triticum aestivum | 86.48 | 0.0 | 1227 |
| LLPS-Hov-0092 | Hordeum vulgare | 86.21 | 0.0 | 1210 |
| LLPS-Ori-0384 | Oryza indica | 85.68 | 0.0 | 1120 |
| LLPS-Brd-0065 | Brachypodium distachyon | 85.54 | 0.0 | 1206 |
| LLPS-Orp-0066 | Oryza punctata | 85.01 | 0.0 | 1112 |
| LLPS-Sei-0121 | Setaria italica | 83.63 | 0.0 | 1212 |
| LLPS-Zem-0773 | Zea mays | 78.98 | 0.0 | 1141 |
| LLPS-Sob-0387 | Sorghum bicolor | 78.7 | 0.0 | 1156 |
| LLPS-Tru-0126 | Triticum urartu | 75.27 | 0.0 | 888 |
| LLPS-Phv-0716 | Phaseolus vulgaris | 65.34 | 0.0 | 667 |
| LLPS-Mua-0363 | Musa acuminata | 65.12 | 0.0 | 926 |
| LLPS-Viv-1240 | Vitis vinifera | 61.34 | 0.0 | 902 |
| LLPS-Thc-0111 | Theobroma cacao | 61.26 | 0.0 | 862 |
| LLPS-Mae-1552 | Manihot esculenta | 61.19 | 0.0 | 853 |
| LLPS-Gor-0317 | Gossypium raimondii | 60.98 | 0.0 | 878 |
| LLPS-Coc-1414 | Corchorus capsularis | 60.98 | 0.0 | 871 |
| LLPS-Prp-0477 | Prunus persica | 60.34 | 0.0 | 854 |
| LLPS-Glm-0194 | Glycine max | 59.86 | 0.0 | 842 |
| LLPS-Met-0934 | Medicago truncatula | 59.81 | 0.0 | 840 |
| LLPS-Pot-0323 | Populus trichocarpa | 59.61 | 0.0 | 839 |
| LLPS-Dac-0438 | Daucus carota | 59.35 | 0.0 | 834 |
| LLPS-Hea-0193 | Helianthus annuus | 57.71 | 0.0 | 801 |
| LLPS-Amt-0795 | Amborella trichopoda | 57.45 | 0.0 | 823 |
| LLPS-Art-0271 | Arabidopsis thaliana | 57.03 | 0.0 | 810 |
| LLPS-Bro-1838 | Brassica oleracea | 56.77 | 0.0 | 800 |
| LLPS-Cus-1215 | Cucumis sativus | 56.73 | 0.0 | 808 |
| LLPS-Brn-0120 | Brassica napus | 56.37 | 0.0 | 804 |
| LLPS-Brr-0904 | Brassica rapa | 55.96 | 0.0 | 792 |
| LLPS-Arl-1707 | Arabidopsis lyrata | 55.87 | 0.0 | 792 |
| LLPS-Nia-0459 | Nicotiana attenuata | 55.26 | 0.0 | 810 |
| LLPS-Sol-0904 | Solanum lycopersicum | 53.01 | 0.0 | 795 |
| LLPS-Vir-2233 | Vigna radiata | 50.53 | 2e-75 | 250 |
| LLPS-Via-1097 | Vigna angularis | 49.74 | 0.0 | 682 |
| LLPS-Php-0306 | Physcomitrella patens | 46.15 | 0.0 | 603 |
| LLPS-Sem-1670 | Selaginella moellendorffii | 38.87 | 4e-44 | 164 |
| LLPS-Dar-1929 | Danio rerio | 28.22 | 2e-12 | 71.6 |
| LLPS-Icp-0612 | Ictalurus punctatus | 28.0 | 5e-15 | 83.2 |
| LLPS-Asm-1804 | Astyanax mexicanus | 27.16 | 4e-15 | 83.2 |
| LLPS-Mod-1474 | Monodelphis domestica | 26.68 | 1e-19 | 97.8 |
| LLPS-Mal-0284 | Mandrillus leucophaeus | 26.23 | 4e-20 | 99.0 |
| LLPS-Orc-2216 | Oryctolagus cuniculus | 26.09 | 2e-19 | 97.1 |
| LLPS-Meg-1917 | Meleagris gallopavo | 25.99 | 1e-18 | 94.7 |
| LLPS-Paa-0881 | Papio anubis | 25.96 | 2e-18 | 94.0 |
| LLPS-Ora-1589 | Ornithorhynchus anatinus | 25.69 | 5e-14 | 79.7 |
| LLPS-Eqc-2446 | Equus caballus | 25.37 | 5e-18 | 92.8 |
| LLPS-Scf-1550 | Scleropages formosus | 25.35 | 5e-17 | 89.4 |
| LLPS-Man-1348 | Macaca nemestrina | 25.14 | 1e-15 | 84.7 |
| LLPS-Otg-1583 | Otolemur garnettii | 24.4 | 8e-19 | 95.1 |
| LLPS-Gaa-0016 | Gasterosteus aculeatus | 24.34 | 6e-18 | 92.4 |
| LLPS-Cii-0012 | Ciona intestinalis | 24.28 | 5e-08 | 58.5 |
| LLPS-Cap-0422 | Cavia porcellus | 24.21 | 3e-20 | 99.8 |
| LLPS-Orn-1429 | Oreochromis niloticus | 24.14 | 3e-19 | 96.7 |
| LLPS-Myl-2874 | Myotis lucifugus | 23.85 | 1e-17 | 91.7 |
| LLPS-Sah-0988 | Sarcophilus harrisii | 23.81 | 1e-20 | 101 |
| LLPS-Fud-1039 | Fukomys damarensis | 23.63 | 1e-17 | 91.3 |
| LLPS-Cas-2914 | Carlito syrichta | 23.63 | 3e-21 | 102 |
| LLPS-Caj-0003 | Callithrix jacchus | 23.59 | 2e-19 | 96.7 |
| LLPS-Dio-1289 | Dipodomys ordii | 23.59 | 6e-21 | 102 |
| LLPS-Scm-0422 | Scophthalmus maximus | 23.56 | 2e-19 | 97.4 |
| LLPS-Xim-0174 | Xiphophorus maculatus | 23.55 | 9e-19 | 95.1 |
| LLPS-Pes-1861 | Pelodiscus sinensis | 23.53 | 1e-21 | 103 |
| LLPS-Osl-0026 | Ostreococcus lucimarinus | 23.53 | 2e-17 | 91.3 |
| LLPS-Cea-0190 | Cercocebus atys | 23.46 | 3e-21 | 102 |
| LLPS-Ict-0198 | Ictidomys tridecemlineatus | 23.46 | 5e-22 | 105 |
| LLPS-Aon-0144 | Aotus nancymaae | 23.42 | 7e-19 | 95.5 |
| LLPS-Mea-0122 | Mesocricetus auratus | 23.42 | 9e-20 | 98.2 |
| LLPS-Leo-0296 | Lepisosteus oculatus | 23.4 | 1e-15 | 84.7 |
| LLPS-Nol-0422 | Nomascus leucogenys | 23.37 | 1e-20 | 100 |
| LLPS-Mum-0137 | Mus musculus | 23.29 | 2e-20 | 100 |
| LLPS-Fec-0731 | Felis catus | 23.29 | 2e-19 | 97.1 |
| LLPS-Chs-1033 | Chlorocebus sabaeus | 23.28 | 2e-21 | 103 |
| LLPS-Rhb-0808 | Rhinopithecus bieti | 23.28 | 2e-21 | 103 |
| LLPS-Orl-0275 | Oryzias latipes | 23.24 | 1e-19 | 97.8 |
| LLPS-Ran-0712 | Rattus norvegicus | 23.2 | 8e-21 | 101 |
| LLPS-Poa-1653 | Pongo abelii | 23.2 | 2e-20 | 100 |
| LLPS-Loa-0163 | Loxodonta africana | 23.19 | 8e-20 | 98.6 |
| LLPS-Cis-0545 | Ciona savignyi | 23.17 | 3e-19 | 96.7 |
| LLPS-Urm-0299 | Ursus maritimus | 23.12 | 2e-18 | 94.4 |
| LLPS-Pof-2859 | Poecilia formosa | 23.11 | 6e-18 | 92.4 |
| LLPS-Maf-2040 | Macaca fascicularis | 23.1 | 1e-20 | 101 |
| LLPS-Mam-0306 | Macaca mulatta | 23.1 | 1e-20 | 100 |
| LLPS-Lac-0291 | Latimeria chalumnae | 23.09 | 3e-16 | 87.0 |
| LLPS-Anc-1755 | Anolis carolinensis | 23.08 | 7e-19 | 95.5 |
| LLPS-Fia-0242 | Ficedula albicollis | 23.06 | 5e-19 | 95.9 |
| LLPS-Aim-0862 | Ailuropoda melanoleuca | 23.04 | 4e-17 | 89.7 |
| LLPS-Gog-0405 | Gorilla gorilla | 23.02 | 3e-20 | 99.4 |
| LLPS-Pat-2100 | Pan troglodytes | 23.02 | 5e-20 | 99.0 |
| LLPS-Hos-0681 | Homo sapiens | 23.02 | 3e-20 | 99.8 |
| LLPS-Gaga-2627 | Gallus gallus | 22.99 | 3e-19 | 97.1 |
| LLPS-Mup-0761 | Mustela putorius furo | 22.94 | 2e-18 | 94.0 |
| LLPS-Ten-0803 | Tetraodon nigroviridis | 22.94 | 4e-17 | 90.1 |
| LLPS-Tag-0526 | Taeniopygia guttata | 22.91 | 5e-19 | 95.9 |
| LLPS-Pap-0158 | Pan paniscus | 22.85 | 5e-20 | 99.0 |
| LLPS-Xet-0250 | Xenopus tropicalis | 22.83 | 3e-13 | 77.4 |
| LLPS-Caf-0271 | Canis familiaris | 22.81 | 2e-17 | 90.5 |
| LLPS-Anp-0043 | Anas platyrhynchos | 22.79 | 4e-18 | 92.8 |
| LLPS-Sus-0475 | Sus scrofa | 22.75 | 2e-19 | 97.1 |
| LLPS-Tar-1166 | Takifugu rubripes | 22.75 | 1e-15 | 85.5 |
| LLPS-Ova-0670 | Ovis aries | 22.56 | 1e-19 | 97.4 |
| LLPS-Bot-0600 | Bos taurus | 22.54 | 1e-18 | 94.7 |
| LLPS-Tut-0886 | Tursiops truncatus | 22.4 | 4e-18 | 92.8 |
| LLPS-Cae-0308 | Caenorhabditis elegans | 21.87 | 2e-09 | 65.1 |
| LLPS-Drm-0122 | Drosophila melanogaster | 21.42 | 4e-11 | 70.5 |