Macaca nemestrina      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 120 genes.  Reviewed (0 or Unreviewed (120

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Man-0223
ENSMNEG00000014372.1
A0A2K6AVD7
2
LLPS-Man-0581
ENSMNEG00000027680.1
A0A2K6B5G8
3
LLPS-Man-0996
ENSMNEG00000035750.1
A0A2K6CL94
4
LLPS-Man-1021
ENSMNEG00000035144.1
A0A2K6CHF9
5
LLPS-Man-1162
ENSMNEG00000012078.1
A0A2K6ATU9
6
LLPS-Man-1746
ENSMNEG00000041929.1
A0A2K6DP74
7
LLPS-Man-1751
ENSMNEG00000039801.1
A0A2K6DBA0
8
LLPS-Man-1871
ENSMNEG00000031061.1
A0A2K6BR12
9
LLPS-Man-1914
ENSMNEG00000044633.1
A0A2K6E7A8
10
LLPS-Man-3084
ENSMNEG00000030203.1
A0A2K6BK01
11
LLPS-Man-3969
ENSMNEG00000032366.1
A0A2K6BZF7
12
LLPS-Man-0597
ENSMNEG00000019904.1
A0A2K6AYZ0
AGO2
13
LLPS-Man-4706
ENSMNEG00000034896.1
A0A2K6CFP1
AKAP17A
14
LLPS-Man-2323
ENSMNEG00000043666.1
A0A2K6E0L1
ALYREF
15
LLPS-Man-2025
ENSMNEG00000009695.1
A0A2K6ASI7
ANXA10
16
LLPS-Man-1606
ENSMNEG00000043015.1
A0A2K6DWE2
ANXA2
17
LLPS-Man-1799
ENSMNEG00000015953.1
A0A2K6AWD0
ARL6IP4
18
LLPS-Man-0908
ENSMNEG00000006874.1
A0A2K6AR03
ATR
19
LLPS-Man-1963
ENSMNEG00000029335.1
A0A2K6BEJ0
BCAS2
20
LLPS-Man-1661
ENSMNEG00000036833.1
A0A2K6CSY2
C9orf78
21
LLPS-Man-2045
ENSMNEG00000031496.1
A0A2K6BTP4
CARM1
22
LLPS-Man-0634
ENSMNEG00000042991.1
A0A2K6DWA2
CCNL1
23
LLPS-Man-0124
ENSMNEG00000036577.1
A0A2K6CRH7
CDC5L
24
LLPS-Man-1604
ENSMNEG00000043947.1
A0A2K6E2T4
CDK1
25
LLPS-Man-4616
ENSMNEG00000027189.1
A0A2K6B4C5
CDK7
26
LLPS-Man-0899
ENSMNEG00000039125.1
A0A2K6D689
CDK9
27
LLPS-Man-0039
ENSMNEG00000004730.1
A0A2K6APA4
CDKL5
28
LLPS-Man-0229
ENSMNEG00000041745.1
A0A2K6DNT5
COP1
29
LLPS-Man-1299
ENSMNEG00000036153.1
A0A2K6CPS0
CSNK1A1
30
LLPS-Man-1842
ENSMNEG00000041059.1
A0A2K6DIU1
DDX39B
31
LLPS-Man-1485
ENSMNEG00000029903.1
A0A2K6BIX2
DDX46
32
LLPS-Man-3687
ENSMNEG00000009733.1
A0A2K6ASK9
DGCR8
33
LLPS-Man-2059
ENSMNEG00000010488.1
A0A2K6ASZ6
DNAJB1
34
LLPS-Man-2250
ENSMNEG00000041956.1
A0A2K6DPH3
DNAJC17
35
LLPS-Man-4554
ENSMNEG00000043248.1
A0A2K6DXX3
DYRK3
36
LLPS-Man-4427
ENSMNEG00000033504.1
A0A2K6C6Q9
EGF
37
LLPS-Man-0136
ENSMNEG00000035391.1
A0A2K6CIV8
ERH
38
LLPS-Man-0130
ENSMNEG00000043174.1
A0A2K6DXE3
EZH1
39
LLPS-Man-2888
ENSMNEG00000009651.1
A0A2K6ASI4
FAM76B
40
LLPS-Man-3975
ENSMNEG00000043239.1
A0A2K6DXT7
FAM83H
41
LLPS-Man-0076
ENSMNEG00000015882.1
A0A2K6AWE1
FANCD2
42
LLPS-Man-2196
ENSMNEG00000043844.1
A0A2K6E2C1
FANCI
43
LLPS-Man-1568
ENSMNEG00000006983.1
A0A2K6AQX9
FBXL18
44
LLPS-Man-2361
ENSMNEG00000033546.1
A0A2K6C8X2
FGFR1
45
LLPS-Man-0704
ENSMNEG00000025492.1
A0A2K6B2L3
FRMD8
46
LLPS-Man-1652
ENSMNEG00000027646.1
A0A2K6B648
FUS
47
LLPS-Man-4851
ENSMNEG00000038497.1
A0A2K6D2D2
FYTTD1
48
LLPS-Man-3649
ENSMNEG00000019458.1
A0A2K6AYF5
GLI3
49
LLPS-Man-3378
ENSMNEG00000026988.1
A0A2K6B412
GSK3B
50
LLPS-Man-2416
ENSMNEG00000043350.1
A0A2K6DZ30
HIF1A
51
LLPS-Man-1988
ENSMNEG00000038570.1
A0A2K6D321
HIF3A
52
LLPS-Man-3540
ENSMNEG00000039195.1
A0A2K6D6L8
HIPK2
53
LLPS-Man-2758
ENSMNEG00000042992.1
A0A2K6DWA3
HNRNPA1
54
LLPS-Man-1581
ENSMNEG00000029148.1
A0A2K6BDJ1
HNRNPA2B1
55
LLPS-Man-0590
ENSMNEG00000044879.1
A0A2K6E9E8
HNRNPK
56
LLPS-Man-3953
ENSMNEG00000032386.1
A0A2K6C053
HSPH1
57
LLPS-Man-1978
ENSMNEG00000042707.1
A0A2K6DVD1
ILF3
58
LLPS-Man-0632
ENSMNEG00000032537.1
A0A2K6C098
IVNS1ABP
59
LLPS-Man-0093
ENSMNEG00000041275.1
A0A2K6DKA3
KPNA2
60
LLPS-Man-2670
ENSMNEG00000044263.1
A0A2K6E4N5
LUC7L
61
LLPS-Man-0708
ENSMNEG00000042011.1
A0A2K6DPX6
LUC7L2
62
LLPS-Man-0454
ENSMNEG00000031942.1
A0A2K6BWL2
MAGOH
63
LLPS-Man-1622
ENSMNEG00000001946.1
A0A2K6AMS6
NAGK
64
LLPS-Man-4004
ENSMNEG00000045325.1
A0A2K6EBW5
NKAP
65
LLPS-Man-1250
ENSMNEG00000009698.1
A0A2K6ASM7
NONO
66
LLPS-Man-2314
ENSMNEG00000037300.1
A0A2K6CW08
NR5A1
67
LLPS-Man-3428
ENSMNEG00000039986.1
A0A2K6DC07
NSRP1
68
LLPS-Man-1039
ENSMNEG00000035837.1
A0A2K6CLP3
NUAK2
69
LLPS-Man-2582
ENSMNEG00000034667.1
A0A2K6CE54
NXF1
70
LLPS-Man-1806
ENSMNEG00000037925.1
A0A2K6CZF7
OGG1
71
LLPS-Man-2218
ENSMNEG00000003609.1
A0A2K6ANJ8
P2RY12
72
LLPS-Man-2172
ENSMNEG00000002934.1
A0A2K6AN92
PCBP1
73
LLPS-Man-1009
ENSMNEG00000042073.1
A0A2K6DQM2
PLRG1
74
LLPS-Man-0584
ENSMNEG00000025074.1
A0A2K6B2B4
PNN
75
LLPS-Man-0304
ENSMNEG00000044068.1
A0A2K6E3L1
PPIG
76
LLPS-Man-0071
ENSMNEG00000044485.1
A0A2K6E6E4
PRPF19
77
LLPS-Man-2716
ENSMNEG00000035713.1
A0A2K6CM08
PRPF8
78
LLPS-Man-1011
ENSMNEG00000027401.1
A0A2K6B4U4
PSPC1
79
LLPS-Man-1279
ENSMNEG00000028851.1
A0A2K6BBD1
PTBP1
80
LLPS-Man-4474
ENSMNEG00000029854.1
A0A2K6BHS3
RAPGEF1
81
LLPS-Man-1499
ENSMNEG00000017264.1
A0A2K6AX73
RBM17
82
LLPS-Man-1018
ENSMNEG00000042442.1
A0A2K6DSU0
RBM23
83
LLPS-Man-1668
ENSMNEG00000030574.1
A0A2K6BME8
RBMX2
84
LLPS-Man-0556
ENSMNEG00000029972.1
A0A2K6BIK4
RNF151
85
LLPS-Man-1369
ENSMNEG00000037901.1
A0A2K6D191
SF1
86
LLPS-Man-3637
ENSMNEG00000037229.1
A0A2K6CVF1
SF3A1
87
LLPS-Man-1426
ENSMNEG00000036916.1
A0A2K6CTK0
SF3A2
88
LLPS-Man-0811
ENSMNEG00000044291.1
A0A2K6E546
SF3A3
89
LLPS-Man-1160
ENSMNEG00000042333.1
A0A2K6DS76
SF3B1
90
LLPS-Man-1859
ENSMNEG00000038895.1
A0A2K6D4S3
SFPQ
91
LLPS-Man-0842
ENSMNEG00000033094.1
A0A2K6C3Y4
SMAD3
92
LLPS-Man-1084
ENSMNEG00000032398.1
A0A2K6C382
SNRNP200
93
LLPS-Man-4050
ENSMNEG00000018139.1
A0A2K6AXI8
SNRNP35
94
LLPS-Man-0699
ENSMNEG00000038057.1
A0A2K6D005
SNRNP70
95
LLPS-Man-2455
ENSMNEG00000037687.1
A0A2K6CXW3
SNRPA
96
LLPS-Man-2131
ENSMNEG00000044916.1
A0A2K6E958
SNRPA1
97
LLPS-Man-2343
ENSMNEG00000044034.1
A0A2K6E381
SNRPB2
98
LLPS-Man-3353
ENSMNEG00000031671.1
A0A2K6BUQ0
SON
99
LLPS-Man-3419
ENSMNEG00000044368.1
A0A2K6E5E2
SPOP
100
LLPS-Man-3193
ENSMNEG00000042677.1
A0A2K6DU89
SRRM2
101
LLPS-Man-0032
ENSMNEG00000041500.1
A0A2K6DLX4
SRSF10
102
LLPS-Man-3062
ENSMNEG00000029428.1
A0A2K6BF50
SRSF11
103
LLPS-Man-1911
ENSMNEG00000031444.1
A0A2K6BT71
SRSF2
104
LLPS-Man-1417
ENSMNEG00000038420.1
A0A2K6D1V0
SRSF3
105
LLPS-Man-2939
ENSMNEG00000034931.1
A0A2K6CFY3
SRSF4
106
LLPS-Man-1890
ENSMNEG00000036669.1
A0A2K6CRY8
SRSF7
107
LLPS-Man-2217
ENSMNEG00000044129.1
A0A2K6E3S8
SRSF9
108
LLPS-Man-0430
ENSMNEG00000033376.1
A0A2K6C5T8
STAT3
109
LLPS-Man-3225
ENSMNEG00000041518.1
A0A2K6DLT9
TAP1
110
LLPS-Man-1209
ENSMNEG00000031623.1
A0A2K6BUU5
TGFBR1
111
LLPS-Man-0410
ENSMNEG00000034273.1
A0A2K6CBA7
TRA2B
112
LLPS-Man-3397
ENSMNEG00000044800.1
A0A2K6E8A7
TTC14
113
LLPS-Man-3014
ENSMNEG00000042096.1
A0A2K6DQY9
U2AF2
114
LLPS-Man-1625
ENSMNEG00000034553.1
A0A2K6CDH9
U2SURP
115
LLPS-Man-1529
ENSMNEG00000030909.1
A0A2K6BPX7
XPO1
116
LLPS-Man-1386
ENSMNEG00000033751.1
A0A2K6C8G6
YTHDC1
117
LLPS-Man-0756
ENSMNEG00000031205.1
A0A2K6BRP4
ZC3H11A
118
LLPS-Man-2154
ENSMNEG00000042152.1
A0A2K6DR54
ZNF106
119
LLPS-Man-1873
ENSMNEG00000017333.1
A0A2K6AX20
ZNF131
120
LLPS-Man-1006
ENSMNEG00000041230.1
A0A2K6DJV5
ZNF688