Sus scrofa      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 47 genes.  Reviewed (0 or Unreviewed (47

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sus-2389
ENSSSCG00000008294.3
A0A287BGY0
ACTG2
2
LLPS-Sus-1300
ENSSSCG00000004331.4
F1RY19
CASP8AP2
3
LLPS-Sus-0141
ENSSSCG00000006487.3
A0A287AMZ2
CCT3
4
LLPS-Sus-0304
ENSSSCG00000010214.3
C0SW08
CDC2
5
LLPS-Sus-3389
ENSSSCG00000013427.3
A0A286ZNG8
CIRBP
6
LLPS-Sus-0841
ENSSSCG00000017613.3
F1RSD6
COIL
7
LLPS-Sus-4585
ENSSSCG00000007951.4
F1RK46
CREBBP
8
LLPS-Sus-0932
ENSSSCG00000006783.3
F1SBP3
DDX20
9
LLPS-Sus-0083
ENSSSCG00000011880.3
F1SQ18
EAF2
10
LLPS-Sus-4794
ENSSSCG00000025806.2
I3L632
FAM118B
11
LLPS-Sus-3610
ENSSSCG00000034414.1
A0A287AR42
FAM192A
12
LLPS-Sus-0865
ENSSSCG00000030510.2
I3L5T3
FBL
13
LLPS-Sus-2044
ENSSSCG00000012727.4
K7GSF4
FMR1
14
LLPS-Sus-0310
ENSSSCG00000013539.3
A0A287AB67
GTF2F1
15
LLPS-Sus-4086
ENSSSCG00000013862.3
F1S9W1
MED26
16
LLPS-Sus-1921
ENSSSCG00000010576.3
F1S8T1
NOLC1
17
LLPS-Sus-0457
ENSSSCG00000027676.2
I3LB64
NOP56
18
LLPS-Sus-1151
ENSSSCG00000022225.2
A0A287AGF9
NOP58
19
LLPS-Sus-2289
ENSSSCG00000026959.2
I3LF48
NPAT
20
LLPS-Sus-3239
ENSSSCG00000011713.3
F1SJN2
P2RY12
21
LLPS-Sus-1787
ENSSSCG00000013124.3
A0A287AVA7
PATL1
22
LLPS-Sus-0716
ENSSSCG00000008226.3
F1SVC3
POLR1A
23
LLPS-Sus-2172
ENSSSCG00000017385.3
P61291
PSME3
24
LLPS-Sus-1563
ENSSSCG00000011620.3
F1SPF6
RUVBL1
25
LLPS-Sus-0612
ENSSSCG00000003152.3
F1RIP4
RUVBL2
26
LLPS-Sus-2363
ENSSSCG00000009946.3
F1RGA7
SART3
27
LLPS-Sus-2154
ENSSSCG00000006561.3
F1RFX1
SLC39A1
28
LLPS-Sus-1869
ENSSSCG00000016970.3
F1SK26
SMN1
29
LLPS-Sus-1377
ENSSSCG00000005786.3
F1RWS8
SNRPA1
30
LLPS-Sus-3600
ENSSSCG00000037602.1
Q06A96
SNRPB2
31
LLPS-Sus-0765
ENSSSCG00000003701.3
F2Z5G9
SNRPD1
32
LLPS-Sus-1687
ENSSSCG00000023562.2
A1XQR9
SNRPE
33
LLPS-Sus-3174
ENSSSCG00000024776.2
F2Z5V2
SNRPG
34
LLPS-Sus-3149
ENSSSCG00000028124.2
I3LBT8
SNRPN
35
LLPS-Sus-1212
ENSSSCG00000032198.1
A0A287AS40
SPOPL
36
LLPS-Sus-0220
ENSSSCG00000035842.1
A7WLH8
SUMO1
37
LLPS-Sus-0261
ENSSSCG00000023126.2
I3LNA4
TARDBP
38
LLPS-Sus-0329
ENSSSCG00000017118.3
F1S027
TERT
39
LLPS-Sus-0037
ENSSSCG00000003918.4
F1S369
TOE1
40
LLPS-Sus-2116
ENSSSCG00000017360.3
F1RQY4
UBTF
41
LLPS-Sus-4107
ENSSSCG00000028065.2
I3LMI0
USPL1
42
LLPS-Sus-1435
ENSSSCG00000002506.3
F1SAQ6
VRK1
43
LLPS-Sus-0573
ENSSSCG00000017949.3
F1ST42
WRAP53
44
LLPS-Sus-0947
ENSSSCG00000028228.2
A0A287BHC9
XPO1
45
LLPS-Sus-1187
ENSSSCG00000028485.2
I3LFV4
YBX1
46
LLPS-Sus-0813
ENSSSCG00000036595.1
I3LV51
ZGPAT
47
LLPS-Sus-1999
ENSSSCG00000025910.2
A0A287A2X1
ZNF277