LLPS-Sus-3174
SNRPG
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Small nuclear ribonucleoprotein G |
| Gene Name: | SNRPG |
| Ensembl Gene: | ENSSSCG00000024776.2 |
| Ensembl Protein: | ENSSSCP00000025138.1 |
| Organism: | Sus scrofa |
| Taxa ID: | 9823 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Cajal body, Nuclear speckle, Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Plays role in pre-mRNA splicing as core component of the SMN-Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSSSCT00000031595.2 | ENSSSCP00000025138.1 |
| UniProt | F2Z5V2, F2Z5V2_PIG | |
| GeneBank | AEMK02000021 | |
| RefSeq | XM_003125052.3 | XP_003125100.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSKAHPPELK KFMDKKLSLK LNGGRHVQGI LRGFDPFMNL VIDECVEMAT SGQQNNIGMV 60 61 VIRGNSIIML EALERV 76 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGCAAAG CTCACCCGCC GGAGTTGAAG AAATTTATGG ACAAGAAATT ATCATTGAAA 60 61 TTAAATGGTG GCAGACATGT CCAAGGAATA TTGCGAGGAT TTGACCCCTT TATGAACCTT 120 121 GTGATAGATG AATGTGTGGA GATGGCAACA AGTGGTCAAC AGAACAATAT TGGAATGGTG 180 181 GTAATACGAG GAAACAGTAT CATCATGTTA GAAGCCTTGG AACGAGTATG A 231 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Catalytic step 2 spliceosome | |
Cellular Component | Cytosol | |
Cellular Component | P granule | |
Cellular Component | SMN-Sm protein complex | |
Cellular Component | U1 snRNP | |
Cellular Component | U12-type spliceosomal complex | |
Cellular Component | U2 snRNP | |
Cellular Component | U2-type prespliceosome | |
Cellular Component | U4 snRNP | |
Cellular Component | U5 snRNP | |
Molecular Function | RNA binding | |
Biological Process | Spliceosomal snRNP assembly |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Tut-2081 | Tursiops truncatus | 100.0 | 4e-40 | 132 |
| LLPS-Bot-1941 | Bos taurus | 100.0 | 3e-49 | 156 |
| LLPS-Dio-1221 | Dipodomys ordii | 100.0 | 3e-49 | 156 |
| LLPS-Ran-1864 | Rattus norvegicus | 100.0 | 3e-49 | 156 |
| LLPS-Aim-1012 | Ailuropoda melanoleuca | 100.0 | 6e-38 | 128 |
| LLPS-Mup-1179 | Mustela putorius furo | 100.0 | 3e-49 | 156 |
| LLPS-Ova-4370 | Ovis aries | 100.0 | 3e-49 | 156 |
| LLPS-Chs-2425 | Chlorocebus sabaeus | 100.0 | 3e-49 | 156 |
| LLPS-Mum-0702 | Mus musculus | 100.0 | 3e-49 | 156 |
| LLPS-Mea-2587 | Mesocricetus auratus | 100.0 | 3e-49 | 156 |
| LLPS-Fud-2550 | Fukomys damarensis | 100.0 | 3e-49 | 156 |
| LLPS-Cap-0541 | Cavia porcellus | 100.0 | 3e-49 | 156 |
| LLPS-Poa-1730 | Pongo abelii | 100.0 | 3e-49 | 156 |
| LLPS-Caf-0065 | Canis familiaris | 100.0 | 3e-49 | 156 |
| LLPS-Ict-1868 | Ictidomys tridecemlineatus | 100.0 | 3e-49 | 156 |
| LLPS-Fec-2213 | Felis catus | 100.0 | 3e-49 | 156 |
| LLPS-Loa-1168 | Loxodonta africana | 100.0 | 3e-49 | 156 |
| LLPS-Rhb-0470 | Rhinopithecus bieti | 100.0 | 3e-49 | 156 |
| LLPS-Caj-3021 | Callithrix jacchus | 98.7 | 2e-47 | 151 |
| LLPS-Myl-1708 | Myotis lucifugus | 98.68 | 2e-48 | 154 |
| LLPS-Maf-3151 | Macaca fascicularis | 98.68 | 9e-49 | 155 |
| LLPS-Mam-2005 | Macaca mulatta | 98.68 | 3e-48 | 154 |
| LLPS-Orc-0726 | Oryctolagus cuniculus | 98.68 | 3e-48 | 154 |
| LLPS-Ere-0219 | Erinaceus europaeus | 98.65 | 1e-46 | 149 |
| LLPS-Mal-3916 | Mandrillus leucophaeus | 98.63 | 1e-46 | 149 |
| LLPS-Cea-0058 | Cercocebus atys | 98.63 | 1e-46 | 149 |
| LLPS-Cas-0699 | Carlito syrichta | 98.41 | 4e-39 | 130 |
| LLPS-Aon-0938 | Aotus nancymaae | 97.37 | 2e-47 | 151 |
| LLPS-Sah-3646 | Sarcophilus harrisii | 97.37 | 2e-47 | 151 |
| LLPS-Gaga-1851 | Gallus gallus | 97.37 | 2e-47 | 151 |
| LLPS-Mod-2014 | Monodelphis domestica | 97.37 | 2e-47 | 151 |
| LLPS-Urm-2747 | Ursus maritimus | 97.06 | 5e-41 | 135 |
| LLPS-Paa-2903 | Papio anubis | 96.05 | 4e-46 | 148 |
| LLPS-Gaa-0947 | Gasterosteus aculeatus | 95.35 | 3e-23 | 89.0 |
| LLPS-Leo-2152 | Lepisosteus oculatus | 93.42 | 7e-46 | 147 |
| LLPS-Lac-0761 | Latimeria chalumnae | 93.42 | 6e-45 | 145 |
| LLPS-Man-1397 | Macaca nemestrina | 93.15 | 1e-42 | 139 |
| LLPS-Nol-3941 | Nomascus leucogenys | 92.42 | 4e-37 | 125 |
| LLPS-Pap-0361 | Pan paniscus | 92.11 | 1e-41 | 136 |
| LLPS-Anp-1481 | Anas platyrhynchos | 91.43 | 2e-38 | 129 |
| LLPS-Fia-0269 | Ficedula albicollis | 91.43 | 3e-39 | 130 |
| LLPS-Xim-0978 | Xiphophorus maculatus | 90.79 | 2e-44 | 144 |
| LLPS-Xet-1977 | Xenopus tropicalis | 90.79 | 3e-44 | 143 |
| LLPS-Pof-0529 | Poecilia formosa | 90.79 | 2e-44 | 144 |
| LLPS-Pat-1019 | Pan troglodytes | 90.79 | 4e-41 | 135 |
| LLPS-Eqc-1975 | Equus caballus | 89.71 | 2e-36 | 123 |
| LLPS-Scf-0591 | Scleropages formosus | 89.47 | 1e-43 | 142 |
| LLPS-Gog-3918 | Gorilla gorilla | 89.47 | 9e-40 | 132 |
| LLPS-Ten-2547 | Tetraodon nigroviridis | 89.47 | 2e-43 | 141 |
| LLPS-Scm-0992 | Scophthalmus maximus | 89.47 | 2e-43 | 141 |
| LLPS-Dar-0747 | Danio rerio | 89.47 | 1e-43 | 142 |
| LLPS-Otg-0623 | Otolemur garnettii | 89.19 | 8e-41 | 134 |
| LLPS-Asm-0036 | Astyanax mexicanus | 88.52 | 6e-34 | 117 |
| LLPS-Orl-0980 | Oryzias latipes | 88.33 | 5e-33 | 115 |
| LLPS-Tag-1223 | Taeniopygia guttata | 86.84 | 3e-40 | 133 |
| LLPS-Icp-2284 | Ictalurus punctatus | 85.53 | 3e-38 | 128 |
| LLPS-Anc-0147 | Anolis carolinensis | 85.53 | 2e-41 | 136 |
| LLPS-Hos-0273 | Homo sapiens | 82.89 | 2e-38 | 129 |
| LLPS-Tar-1588 | Takifugu rubripes | 73.75 | 1e-33 | 116 |
| LLPS-Drm-0884 | Drosophila melanogaster | 72.37 | 6e-35 | 120 |
| LLPS-Cae-0605 | Caenorhabditis elegans | 65.79 | 2e-31 | 110 |
| LLPS-Mua-2308 | Musa acuminata | 64.94 | 4e-27 | 100 |
| LLPS-Amt-0535 | Amborella trichopoda | 64.94 | 7e-26 | 97.1 |
| LLPS-Php-0089 | Physcomitrella patens | 63.64 | 4e-27 | 99.8 |
| LLPS-Sob-2118 | Sorghum bicolor | 63.64 | 1e-25 | 96.3 |
| LLPS-Fuo-1053 | Fusarium oxysporum | 62.86 | 7e-26 | 97.1 |
| LLPS-Orgl-1473 | Oryza glumaepatula | 62.34 | 3e-25 | 95.1 |
| LLPS-Lep-0600 | Leersia perrieri | 62.34 | 2e-25 | 95.5 |
| LLPS-Sei-1369 | Setaria italica | 62.34 | 3e-25 | 95.1 |
| LLPS-Ori-0995 | Oryza indica | 62.34 | 3e-25 | 95.1 |
| LLPS-Orni-0866 | Oryza nivara | 62.34 | 3e-25 | 95.1 |
| LLPS-Orr-0533 | Oryza rufipogon | 62.34 | 3e-25 | 95.1 |
| LLPS-Org-2066 | Oryza glaberrima | 62.34 | 3e-25 | 95.1 |
| LLPS-Zem-1460 | Zea mays | 62.34 | 1e-24 | 93.6 |
| LLPS-Ors-1675 | Oryza sativa | 62.34 | 3e-25 | 95.1 |
| LLPS-Orbr-0992 | Oryza brachyantha | 62.34 | 2e-25 | 95.5 |
| LLPS-Chr-0419 | Chlamydomonas reinhardtii | 61.84 | 6e-24 | 91.7 |
| LLPS-Asf-0442 | Aspergillus flavus | 61.43 | 5e-24 | 92.0 |
| LLPS-Asc-1014 | Aspergillus clavatus | 61.43 | 4e-24 | 92.0 |
| LLPS-Ved-1346 | Verticillium dahliae | 61.43 | 3e-25 | 95.5 |
| LLPS-Nef-0293 | Neosartorya fischeri | 61.43 | 4e-24 | 92.0 |
| LLPS-Brd-0483 | Brachypodium distachyon | 61.33 | 2e-24 | 93.2 |
| LLPS-Sot-0108 | Solanum tuberosum | 61.04 | 3e-24 | 92.4 |
| LLPS-Arl-0301 | Arabidopsis lyrata | 61.04 | 3e-24 | 92.8 |
| LLPS-Glm-1784 | Glycine max | 61.04 | 7e-25 | 94.4 |
| LLPS-Sol-0172 | Solanum lycopersicum | 61.04 | 4e-24 | 92.4 |
| LLPS-Brn-1027 | Brassica napus | 61.04 | 8e-24 | 91.3 |
| LLPS-Hea-1793 | Helianthus annuus | 61.04 | 3e-24 | 92.4 |
| LLPS-Dac-1405 | Daucus carota | 61.04 | 2e-24 | 93.2 |
| LLPS-Coc-0987 | Corchorus capsularis | 61.04 | 1e-24 | 93.6 |
| LLPS-Prp-0016 | Prunus persica | 61.04 | 1e-24 | 93.6 |
| LLPS-Bro-0493 | Brassica oleracea | 61.04 | 8e-24 | 91.3 |
| LLPS-Brr-0566 | Brassica rapa | 61.04 | 5e-24 | 92.0 |
| LLPS-Art-1770 | Arabidopsis thaliana | 61.04 | 8e-24 | 91.3 |
| LLPS-Mae-0655 | Manihot esculenta | 61.04 | 9e-25 | 94.0 |
| LLPS-Blg-1581 | Blumeria graminis | 60.0 | 2e-24 | 92.8 |
| LLPS-Scs-0548 | Sclerotinia sclerotiorum | 60.0 | 1e-24 | 93.6 |
| LLPS-Coo-1229 | Colletotrichum orbiculare | 60.0 | 9e-25 | 94.0 |
| LLPS-Trv-0766 | Trichoderma virens | 60.0 | 1e-24 | 94.0 |
| LLPS-Asfu-1175 | Aspergillus fumigatus | 60.0 | 7e-24 | 91.7 |
| LLPS-Cogr-0050 | Colletotrichum graminicola | 60.0 | 9e-25 | 94.0 |
| LLPS-Ast-1460 | Aspergillus terreus | 60.0 | 8e-24 | 91.3 |
| LLPS-Trr-1345 | Trichoderma reesei | 60.0 | 1e-24 | 94.0 |
| LLPS-Cus-0858 | Cucumis sativus | 59.74 | 1e-23 | 91.3 |
| LLPS-Sem-1971 | Selaginella moellendorffii | 59.74 | 1e-22 | 88.6 |
| LLPS-Thc-0041 | Theobroma cacao | 59.74 | 7e-24 | 91.7 |
| LLPS-Gor-0552 | Gossypium raimondii | 59.74 | 6e-24 | 91.7 |
| LLPS-Viv-0029 | Vitis vinifera | 59.74 | 5e-24 | 92.0 |
| LLPS-Tum-0931 | Tuber melanosporum | 58.57 | 4e-24 | 92.4 |
| LLPS-Asn-0186 | Aspergillus nidulans | 58.57 | 2e-23 | 90.5 |
| LLPS-Met-0712 | Medicago truncatula | 58.44 | 5e-24 | 92.0 |
| LLPS-Vir-0696 | Vigna radiata | 58.44 | 3e-23 | 91.3 |
| LLPS-Orb-1806 | Oryza barthii | 58.44 | 6e-24 | 92.0 |
| LLPS-Orm-1156 | Oryza meridionalis | 58.44 | 6e-24 | 92.0 |
| LLPS-Pot-2315 | Populus trichocarpa | 58.44 | 2e-23 | 90.9 |
| LLPS-Orp-0729 | Oryza punctata | 58.44 | 6e-24 | 92.0 |
| LLPS-Phv-0758 | Phaseolus vulgaris | 58.44 | 9e-24 | 91.3 |
| LLPS-Aso-0990 | Aspergillus oryzae | 57.63 | 8e-16 | 72.0 |
| LLPS-Cog-0643 | Colletotrichum gloeosporioides | 56.45 | 1e-19 | 81.3 |
| LLPS-Mel-0972 | Melampsora laricipopulina | 55.84 | 2e-21 | 85.5 |
| LLPS-Put-0596 | Puccinia triticina | 55.84 | 5e-22 | 86.7 |
| LLPS-Lem-0748 | Leptosphaeria maculans | 55.71 | 2e-23 | 90.5 |
| LLPS-Nec-1140 | Neurospora crassa | 55.71 | 2e-23 | 90.5 |
| LLPS-Gag-0693 | Gaeumannomyces graminis | 55.71 | 3e-23 | 90.5 |
| LLPS-Beb-0954 | Beauveria bassiana | 55.71 | 2e-23 | 90.9 |
| LLPS-Crn-0053 | Cryptococcus neoformans | 55.41 | 2e-22 | 88.2 |
| LLPS-Chc-0632 | Chondrus crispus | 54.93 | 3e-23 | 89.7 |
| LLPS-Sac-1057 | Saccharomyces cerevisiae | 54.79 | 1e-18 | 78.2 |
| LLPS-Tra-0731 | Triticum aestivum | 54.67 | 5e-19 | 79.0 |
| LLPS-Pug-1293 | Puccinia graminis | 54.55 | 8e-22 | 86.3 |
| LLPS-Map-0419 | Magnaporthe poae | 54.29 | 3e-23 | 90.1 |
| LLPS-Phn-0789 | Phaeosphaeria nodorum | 54.29 | 1e-23 | 90.9 |
| LLPS-Hov-1928 | Hordeum vulgare | 54.22 | 6e-21 | 84.3 |
| LLPS-Osl-1122 | Ostreococcus lucimarinus | 53.12 | 5e-17 | 73.6 |
| LLPS-Pyt-0110 | Pyrenophora teres | 52.86 | 1e-22 | 88.6 |
| LLPS-Mao-0602 | Magnaporthe oryzae | 52.86 | 1e-21 | 85.9 |
| LLPS-Pytr-1112 | Pyrenophora triticirepentis | 52.86 | 1e-22 | 88.6 |
| LLPS-Dos-0742 | Dothistroma septosporum | 52.86 | 8e-23 | 89.0 |
| LLPS-Zyt-1160 | Zymoseptoria tritici | 51.43 | 7e-22 | 86.7 |
| LLPS-Asg-0102 | Ashbya gossypii | 51.43 | 6e-19 | 79.0 |
| LLPS-Gas-0128 | Galdieria sulphuraria | 50.7 | 3e-21 | 84.7 |
| LLPS-Miv-0936 | Microbotryum violaceum | 50.7 | 4e-16 | 71.6 |
| LLPS-Scc-1001 | Schizosaccharomyces cryophilus | 50.0 | 2e-23 | 90.5 |
| LLPS-Usm-0207 | Ustilago maydis | 48.81 | 3e-20 | 82.4 |
| LLPS-Spr-0316 | Sporisorium reilianum | 48.81 | 2e-20 | 82.8 |
| LLPS-Scj-0662 | Schizosaccharomyces japonicus | 48.68 | 2e-23 | 90.9 |
| LLPS-Scp-0638 | Schizosaccharomyces pombe | 48.0 | 5e-22 | 87.0 |
| LLPS-Asni-1169 | Aspergillus niger | 47.89 | 2e-17 | 75.5 |
| LLPS-Kop-0447 | Komagataella pastoris | 45.71 | 4e-18 | 76.6 |
| LLPS-Fuv-0841 | Fusarium verticillioides | 38.03 | 1e-12 | 63.2 |
| LLPS-Fus-0326 | Fusarium solani | 38.03 | 1e-12 | 63.5 |
| LLPS-Via-0041 | Vigna angularis | 37.33 | 1e-12 | 62.8 |
| LLPS-Abg-1600 | Absidia glauca | 36.49 | 1e-11 | 60.8 |