DrLLPS - Data resource of LLPS

LLPS-Zem-1862
100279765

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	RNA-binding (RRM/RBD/RNP motifs) family protein
Gene Name:	100279765, ZEAMMB73_Zm00001d052453
Ensembl Gene:	Zm00001d052453
Ensembl Protein:	Zm00001d052453_P007
Organism:	Zea mays
Taxa ID:	4577
LLPS Type:	Client

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Nucleolus, P-body, Stress granule, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Homo sapiens	LLPS-Hos-2095	O60506	Client	Nuclear speckle, Nucleolus, P-body, Stress granule, Postsynaptic density	100.00	2e-69	210

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	Zm00001d052453_T007	Zm00001d052453_P007
Ensembl	Zm00001d052453_T009	Zm00001d052453_P009
Ensembl	Zm00001d052453_T001	Zm00001d052453_P001
Ensembl	Zm00001d052453_T011	Zm00001d052453_P011
Ensembl	Zm00001d052453_T012	Zm00001d052453_P012
Ensembl	Zm00001d052453_T004	Zm00001d052453_P004
Ensembl	Zm00001d052453_T005	Zm00001d052453_P005
Ensembl	Zm00001d052453_T008	Zm00001d052453_P008
Ensembl	Zm00001d052453_T006	Zm00001d052453_P006
Ensembl	Zm00001d052453_T014	Zm00001d052453_P014
Ensembl	Zm00001d052453_T013	Zm00001d052453_P013
Ensembl	Zm00001d052453_T003	Zm00001d052453_P003
Ensembl	Zm00001d052453_T010	Zm00001d052453_P010
Ensembl	Zm00001d052453_T002	Zm00001d052453_P002
UniProt		C4IYY4, C4IYY4_MAIZE
GeneBank	CM000780, BT083781	AQK57279.1, AQK57278.1, AQK57281.1, AQK57280.1, ACR34134.1
RefSeq	NM_001317840.1	NP_001304769.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MPRRTGNAAS TKSVELVKQD QMEFDHPDEV DEEEEVEYEE IEEEVEYEEV EVEEEEEEEE 60 61 EDEIEGVREV DANHDSKIVD DDPKDGNEKE KHAELLALPP HGAEVYVGGL SSDVSSEDLK 120 121 QLFESVGEVA EVRMRGKGDN KTYAFINFRT KEMALKAIQK LSNKDLKGKK IKVSSSQAKN 180 181 RLFIGNVPHD WTPDDFKTAV EEVGPGVLKV DLMKAPGSGR NKGYGFIEYY NQACAEYAKQ 240 241 KMSTPEFKLD TNAPTVSWAD HKNASEATST SQVKSLYVKN LPKTVTQEQL KKLFEHVGEI 300 301 TKVVIPPAKS GHENRYGFVH FKERSMVMKA LKNTERYELD GQLLDCSPAK PPADKKDDTG 360 361 SSPTAKGRPL PPSYAPLGYG LAGAYNPLGK GLAGAYNSPG NGLAGAYGVL SAHAAQPMLY 420 421 APGASPGSTM IPMVLPDGRL VYVPQTAGQQ PLHVTSPLPQ QGGRRFGGGG GSSSGGKRQR 480 481 GDDRGSNSNS SRRGWHRPY 499
Nucleotide CDS Sequence (FASTA)
1 ATGCCAAGGA GAACAGGAAA TGCTGCTTCG ACCAAATCAG TTGAATTGGT CAAACAAGAC 60 61 CAAATGGAGT TTGATCATCC TGATGAGGTA GATGAAGAGG AAGAAGTTGA GTATGAAGAA 120 121 ATTGAGGAGG AGGTTGAGTA TGAAGAGGTA GAGGTAGAGG AGGAGGAGGA GGAGGAGGAG 180 181 GAGGATGAAA TTGAAGGTGT GCGTGAAGTT GATGCTAATC ATGACAGTAA AATAGTGGAT 240 241 GATGATCCCA AGGATGGGAA TGAAAAAGAA AAGCATGCTG AGCTTCTTGC TCTTCCTCCT 300 301 CATGGAGCTG AAGTTTATGT TGGGGGGCTT TCCTCTGATG TATCTTCTGA AGATCTCAAA 360 361 CAACTATTTG AATCTGTTGG AGAAGTTGCA GAAGTGCGAA TGCGAGGAAA GGGGGATAAC 420 421 AAGACATATG CTTTTATTAA TTTCAGAACT AAAGAGATGG CTTTAAAGGC CATCCAAAAG 480 481 TTGAGCAATA AAGACCTAAA GGGAAAAAAG ATAAAAGTTT CATCCTCTCA GGCTAAGAAT 540 541 AGGCTTTTTA TTGGGAATGT ACCCCATGAT TGGACACCTG ATGATTTCAA AACCGCAGTG 600 601 GAAGAAGTTG GTCCTGGAGT TTTAAAAGTT GATCTCATGA AGGCACCAGG CTCAGGTCGC 660 661 AATAAGGGTT ATGGCTTTAT TGAATACTAC AACCAGGCAT GTGCAGAGTA TGCTAAGCAG 720 721 AAGATGTCTA CTCCAGAATT CAAACTAGAT ACAAATGCTC CTACTGTCAG CTGGGCAGAT 780 781 CATAAGAATG CTAGTGAAGC TACATCTACT TCACAGGTTA AATCTCTATA TGTCAAAAAC 840 841 CTC 843

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Sob-0485	Sorghum bicolor	92.29	0.0	731
LLPS-Sei-1730	Setaria italica	78.88	0.0	639
LLPS-Orr-1016	Oryza rufipogon	68.25	2e-167	495
LLPS-Lep-0768	Leersia perrieri	68.25	4e-175	517
LLPS-Orgl-2333	Oryza glumaepatula	67.46	9e-173	511
LLPS-Org-2040	Oryza glaberrima	67.2	3e-173	505
LLPS-Brd-1973	Brachypodium distachyon	65.76	6e-170	497
LLPS-Mua-0582	Musa acuminata	58.76	3e-140	419
LLPS-Phv-2403	Phaseolus vulgaris	58.71	5e-132	399
LLPS-Vir-2059	Vigna radiata	57.99	2e-130	392
LLPS-Prp-1518	Prunus persica	57.0	4e-134	404
LLPS-Thc-2506	Theobroma cacao	56.84	6e-129	391
LLPS-Hea-1618	Helianthus annuus	56.79	1e-128	390
LLPS-Coc-2192	Corchorus capsularis	56.6	3e-128	388
LLPS-Met-2162	Medicago truncatula	56.3	1e-128	390
LLPS-Via-2122	Vigna angularis	55.56	3e-129	392
LLPS-Cus-1406	Cucumis sativus	55.44	8e-132	399
LLPS-Nia-2138	Nicotiana attenuata	54.98	4e-132	399
LLPS-Bro-0084	Brassica oleracea	54.89	1e-118	363
LLPS-Sol-1810	Solanum lycopersicum	54.11	1e-122	372
LLPS-Viv-1451	Vitis vinifera	53.87	7e-122	373
LLPS-Art-2095	Arabidopsis thaliana	53.66	6e-122	372
LLPS-Amt-0180	Amborella trichopoda	53.54	1e-124	380
LLPS-Pot-1759	Populus trichocarpa	53.51	8e-125	380
LLPS-Sot-0410	Solanum tuberosum	53.45	2e-122	374
LLPS-Gor-1541	Gossypium raimondii	52.88	3e-126	384
LLPS-Arl-1317	Arabidopsis lyrata	52.85	2e-119	366
LLPS-Orb-2181	Oryza barthii	52.17	1e-07	58.9
LLPS-Glm-0456	Glycine max	50.67	1e-119	367
LLPS-Orni-0646	Oryza nivara	48.5	2e-86	281
LLPS-Mae-0449	Manihot esculenta	47.97	1e-107	336
LLPS-Brn-0510	Brassica napus	47.46	3e-112	349
LLPS-Php-1698	Physcomitrella patens	47.03	1e-107	337
LLPS-Ori-1197	Oryza indica	46.15	4e-95	303
LLPS-Tra-0763	Triticum aestivum	45.89	7e-98	310
LLPS-Ors-0001	Oryza sativa	45.88	2e-94	301
LLPS-Hov-0681	Hordeum vulgare	45.74	1e-97	310
LLPS-Orm-1036	Oryza meridionalis	45.11	1e-91	294
LLPS-Sem-0924	Selaginella moellendorffii	45.07	1e-100	318
LLPS-Orp-2393	Oryza punctata	44.96	6e-96	305
LLPS-Orbr-0035	Oryza brachyantha	44.27	7e-92	294
LLPS-Dar-0732	Danio rerio	33.58	5e-37	147
LLPS-Scm-0023	Scophthalmus maximus	33.08	3e-34	140
LLPS-Tar-2873	Takifugu rubripes	33.08	9e-33	134
LLPS-Orn-0502	Oreochromis niloticus	32.96	1e-36	146
LLPS-Pof-0542	Poecilia formosa	32.96	9e-37	146
LLPS-Xim-0112	Xiphophorus maculatus	32.96	2e-36	146
LLPS-Xet-3727	Xenopus tropicalis	32.85	5e-37	147
LLPS-Ten-3688	Tetraodon nigroviridis	32.71	1e-32	134
LLPS-Loa-0312	Loxodonta africana	32.7	2e-35	143
LLPS-Ova-1186	Ovis aries	32.7	1e-35	144
LLPS-Paa-2523	Papio anubis	32.7	1e-35	144
LLPS-Scf-2164	Scleropages formosus	32.7	2e-35	144
LLPS-Bot-0701	Bos taurus	32.7	1e-35	144
LLPS-Gaa-2579	Gasterosteus aculeatus	32.7	6e-33	136
LLPS-Caj-1018	Callithrix jacchus	32.7	1e-35	144
LLPS-Mod-2535	Monodelphis domestica	32.6	9e-33	135
LLPS-Ora-1528	Ornithorhynchus anatinus	32.6	3e-33	136
LLPS-Sah-2881	Sarcophilus harrisii	32.6	8e-33	135
LLPS-Orl-2498	Oryzias latipes	32.58	3e-34	139
LLPS-Gaga-1705	Gallus gallus	32.45	1e-35	144
LLPS-Cas-1901	Carlito syrichta	32.45	6e-36	144
LLPS-Tag-1480	Taeniopygia guttata	32.45	9e-33	135
LLPS-Nol-0782	Nomascus leucogenys	32.45	1e-35	144
LLPS-Ict-0599	Ictidomys tridecemlineatus	32.45	6e-36	144
LLPS-Cap-0599	Cavia porcellus	32.45	6e-36	144
LLPS-Poa-2384	Pongo abelii	32.45	6e-36	144
LLPS-Caf-0757	Canis familiaris	32.45	6e-36	144
LLPS-Mam-0933	Macaca mulatta	32.45	1e-35	144
LLPS-Otg-0790	Otolemur garnettii	32.45	2e-35	143
LLPS-Rhb-1777	Rhinopithecus bieti	32.45	6e-36	144
LLPS-Orc-0281	Oryctolagus cuniculus	32.45	2e-35	143
LLPS-Fia-0410	Ficedula albicollis	32.45	5e-36	144
LLPS-Fec-2285	Felis catus	32.45	2e-35	143
LLPS-Meg-1264	Meleagris gallopavo	32.45	1e-35	144
LLPS-Hos-2095	Homo sapiens	32.45	2e-35	143
LLPS-Pat-2184	Pan troglodytes	32.45	6e-36	144
LLPS-Pap-1852	Pan paniscus	32.45	6e-36	144
LLPS-Urm-1469	Ursus maritimus	32.45	6e-36	144
LLPS-Anp-1329	Anas platyrhynchos	32.45	6e-33	135
LLPS-Man-2149	Macaca nemestrina	32.45	6e-36	144
LLPS-Ran-0023	Rattus norvegicus	32.45	9e-36	144
LLPS-Aim-0673	Ailuropoda melanoleuca	32.45	1e-35	144
LLPS-Mup-1555	Mustela putorius furo	32.45	5e-36	144
LLPS-Mal-2303	Mandrillus leucophaeus	32.45	1e-35	144
LLPS-Dio-1086	Dipodomys ordii	32.45	6e-36	144
LLPS-Gog-0118	Gorilla gorilla	32.45	6e-36	144
LLPS-Fud-2086	Fukomys damarensis	32.45	6e-36	144
LLPS-Asm-1198	Astyanax mexicanus	32.45	7e-34	139
LLPS-Chs-1206	Chlorocebus sabaeus	32.45	6e-36	144
LLPS-Maf-0952	Macaca fascicularis	32.45	6e-36	144
LLPS-Mum-2050	Mus musculus	32.45	2e-35	143
LLPS-Mea-0457	Mesocricetus auratus	32.45	9e-36	143
LLPS-Leo-1171	Lepisosteus oculatus	32.45	5e-36	144
LLPS-Sus-0705	Sus scrofa	32.45	2e-35	143
LLPS-Aon-1175	Aotus nancymaae	32.45	2e-35	143
LLPS-Cea-2913	Cercocebus atys	32.45	6e-36	144
LLPS-Lac-3539	Latimeria chalumnae	32.32	7e-35	141
LLPS-Pes-3008	Pelodiscus sinensis	32.23	6e-34	138
LLPS-Icp-3298	Ictalurus punctatus	32.21	1e-35	143
LLPS-Anc-1865	Anolis carolinensis	32.08	3e-35	142
LLPS-Myl-0557	Myotis lucifugus	32.08	7e-35	141
LLPS-Eqc-3680	Equus caballus	31.92	4e-34	139
LLPS-Cii-2001	Ciona intestinalis	31.7	9e-31	129
LLPS-Drm-0002	Drosophila melanogaster	31.06	4e-37	149

LLPS-Zem-1862100279765

Protein Sequence

Nucleotide Sequence

LLPS-Zem-1862
100279765