• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Zem-0267
100192946

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Ribosome biogenesis regulatory protein
Gene Name: 100192946, ZEAMMB73_Zm00001d039611
Ensembl Gene: Zm00001d039611
Ensembl Protein: Zm00001d039611_P008
Organism: Zea mays
Taxa ID: 4577
LLPS Type: LLPS regulator


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Nucleolus, P-bodyPredicted from orthologs(View)

▼ FUNCTION


Involved in ribosomal large subunit assembly.

▼ SEQUENCE


Protein Sequence (FASTA)
1     MAEEPAIVVA  ASSSCEVDLG  NLMAYDPCHH  VAAAASASRE  ELRQECLRKG  TELAQAVADA  60
61    LFALPPTEDR  DGPIVHLPPH  TVRLPREKHL  PKPKPPTKWE  LFAKAKGITK  RKKNKREWDE  120
121   QTQSWKRTYG  YDRVNDDKDV  PILEAKLTDE  PGVDPFAQRR  DEKKKRVEKQ  EKSRLENLKK  180
181   AAKVGALPSY  PISFVCSHIQ  LAAKALPITG  TKADLPKKSR  KEDLESVVGM  ASSATASGGK  240
241   FDEKLPGEKP  PKHPGKHRKF  LPVAEGKGMG  SLEKQQNDKI  LSSLLARNSD  EPLDAITMYK  300
301   VKKEKQRRKE  KNMPSKSDKL  KPQKKPHKKS  SKKRA  335
Nucleotide CDS Sequence (FASTA)
1     ATGGCGGAGG  AGCCCGCCAT  CGTCGTCGCC  GCCTCCTCCA  GCTGCGAGGT  CGACCTCGGC  60
61    AACCTCATGG  CGTACGACCC  GTGTCACCAC  GTCGCAGCCG  CCGCCTCCGC  CTCCAGGGAG  120
121   GAGCTGAGGC  AGGAGTGCCT  GCGGAAGGGG  ACGGAGCTGG  CGCAGGCGGT  GGCCGACGCC  180
181   CTCTTCGCGC  TGCCGCCCAC  CGAGGACCGC  GACGGCCCCA  TCGTCCACCT  CCCGCCACAC  240
241   ACCGTTCGAC  TCCCGCGCGA  GAAGCATCTA  CCCAAGCCCA  AGCCACCGAC  CAAGTGGGAG  300
301   CTGTTTGCAA  AGGCGAAAGG  AATTACCAAG  CGCAAGAAGA  ACAAGCGTGA  GTGGGACGAG  360
361   CAAACTCAAT  CCTGGAAGCG  GACTTATGGC  TATGACCGTG  TAAATGATGA  TAAAGACGTT  420
421   CCGATTCTTG  AAGCCAAACT  GACTGACGAG  CCTGGTGTTG  ATCCCTTTGC  ACAGAGAAGG  480
481   GATGAGAAGA  AGAAGAGGGT  TGAAAAGCAA  GAAAAAAGCA  GATTAGAGAA  TTTAAAGAAA  540
541   GCTGCAAAGG  TTGGTGCTTT  GCCAAGCTAC  CCAATATCTT  TTGTATGCAG  TCATATACAG  600
601   CTTGCTGCGA  AGGCCTTGCC  CATCACAGGA  ACTAAAGCTG  ACCTTCCAAA  AAAATCTAGA  660
661   AAAGAGGATC  TTGAGAGTGT  TGTTGGCATG  GCTTCGTCAG  CAACAGCAAG  CGGTGGGAAG  720
721   TTTGACGAGA  AGTTGCCTGG  CGAGAAACCT  CCAAAGCACC  CTGGCAAACA  TAGAAAGTTC  780
781   CTCCCAGTTG  CTGAGGGGAA  GGGAATGGGC  AGCCTGGAGA  AACAGCAGAA  TGACAAAATC  840
841   CTGAGCTCTC  TACTTGCCAG  AAACTCTGAT  GAACCGCTTG  ATGCAATTAC  AATGTACAAG  900
901   GTGAAAAAGG  AAAAGCAGAG  AAGGAAAGAG  AAAAATATGC  CATCAAAATC  TGATAAGCTT  960
961   AAGCCCCAGA  AGAAACCCCA  CAAGAAATCA  TCGAAGAAAA  GGGCTTAG  1008

▼ KEYWORD


ID
Family
Complete proteome
Nucleus
Reference proteome
Ribosome biogenesis

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Nucleolus
Cellular Component
Preribosome, large subunit precursor
Biological Process
Endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process
Ribosomal large subunit biogenesis
Biological Process
Ribosomal large subunit export from nucleus

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Sob-0453Sorghum bicolor91.412e-167 477
LLPS-Sei-0198Setaria italica87.636e-163 465
LLPS-Orbr-0240Oryza brachyantha81.438e-142 411
LLPS-Org-0205Oryza glaberrima81.034e-151 435
LLPS-Orp-0029Oryza punctata80.973e-149 431
LLPS-Ors-0506Oryza sativa80.692e-149 431
LLPS-Lep-0807Leersia perrieri80.414e-149 430
LLPS-Brd-0630Brachypodium distachyon78.893e-145 421
LLPS-Tra-0563Triticum aestivum77.162e-144 419
LLPS-Hov-2013Hordeum vulgare76.291e-140 410
LLPS-Orb-0851Oryza barthii74.61e-145 422
LLPS-Orgl-0111Oryza glumaepatula74.291e-144 420
LLPS-Orni-0203Oryza nivara74.291e-144 420
LLPS-Orr-0127Oryza rufipogon73.971e-143 417
LLPS-Tru-0461Triticum urartu69.141e-99 302
LLPS-Ori-0357Oryza indica67.937e-114 339
LLPS-Mua-0953Musa acuminata67.631e-117 349
LLPS-Dac-0007Daucus carota67.013e-114 342
LLPS-Viv-2302Vitis vinifera66.787e-113 338
LLPS-Nia-0695Nicotiana attenuata66.674e-109 328
LLPS-Amt-1110Amborella trichopoda66.321e-113 340
LLPS-Sol-0774Solanum lycopersicum65.752e-107 324
LLPS-Mae-0115Manihot esculenta65.526e-110 331
LLPS-Sot-0378Solanum tuberosum65.414e-106 321
LLPS-Coc-0389Corchorus capsularis65.282e-103 314
LLPS-Pot-0934Populus trichocarpa65.164e-106 322
LLPS-Gor-0408Gossypium raimondii64.461e-107 325
LLPS-Hea-1074Helianthus annuus64.118e-112 335
LLPS-Cus-0172Cucumis sativus63.762e-101 308
LLPS-Thc-0571Theobroma cacao63.192e-106 322
LLPS-Prp-0746Prunus persica63.11e-110 332
LLPS-Glm-2118Glycine max61.673e-101 308
LLPS-Phv-1274Phaseolus vulgaris61.323e-105 319
LLPS-Via-0187Vigna angularis60.986e-105 318
LLPS-Arl-0694Arabidopsis lyrata60.634e-102 310
LLPS-Brr-0877Brassica rapa60.282e-98 301
LLPS-Bro-0465Brassica oleracea59.939e-97 296
LLPS-Brn-1249Brassica napus59.937e-97 296
LLPS-Art-0249Arabidopsis thaliana59.587e-98 299
LLPS-Met-1162Medicago truncatula58.229e-100 305
LLPS-Sem-0198Selaginella moellendorffii54.763e-75 239
LLPS-Vir-0170Vigna radiata52.616e-73 235
LLPS-Php-0323Physcomitrella patens48.492e-65 217
LLPS-Pytr-0248Pyrenophora triticirepentis42.198e-0650.1
LLPS-Pyt-0387Pyrenophora teres42.196e-0650.8
LLPS-Nol-1247Nomascus leucogenys41.713e-24 105
LLPS-Dio-1154Dipodomys ordii41.213e-2298.2
LLPS-Cae-0027Caenorhabditis elegans40.893e-30 122
LLPS-Dar-0017Danio rerio39.013e-1784.7
LLPS-Rhb-0740Rhinopithecus bieti38.618e-30 122
LLPS-Spr-0396Sporisorium reilianum38.425e-25 107
LLPS-Cogr-0371Colletotrichum graminicola38.356e-1473.2
LLPS-Mam-1935Macaca mulatta38.228e-29 119
LLPS-Ict-1859Ictidomys tridecemlineatus38.227e-29 119
LLPS-Man-1024Macaca nemestrina38.228e-29 119
LLPS-Ere-0415Erinaceus europaeus38.222e-28 117
LLPS-Mal-1213Mandrillus leucophaeus38.221e-28 118
LLPS-Maf-2003Macaca fascicularis38.228e-29 119
LLPS-Cea-2451Cercocebus atys38.221e-28 118
LLPS-Aon-0927Aotus nancymaae38.226e-29 119
LLPS-Gog-1039Gorilla gorilla38.223e-29 120
LLPS-Caj-1613Callithrix jacchus38.225e-29 119
LLPS-Chr-0150Chlamydomonas reinhardtii38.161e-38 147
LLPS-Pof-0870Poecilia formosa38.131e-22 100
LLPS-Pap-1800Pan paniscus37.846e-29 119
LLPS-Hos-0590Homo sapiens37.841e-28 118
LLPS-Chs-0258Chlorocebus sabaeus37.843e-28 117
LLPS-Gaga-0379Gallus gallus37.784e-1167.8
LLPS-Crn-0932Cryptococcus neoformans37.578e-24 103
LLPS-Poa-1495Pongo abelii37.57e-30 120
LLPS-Eqc-0087Equus caballus37.453e-28 117
LLPS-Cap-0149Cavia porcellus37.453e-28 117
LLPS-Pat-0191Pan troglodytes37.452e-28 118
LLPS-Loa-1644Loxodonta africana37.453e-28 117
LLPS-Gaa-0457Gasterosteus aculeatus37.454e-25 107
LLPS-Mea-0020Mesocricetus auratus37.456e-28 116
LLPS-Sus-1221Sus scrofa37.451e-28 118
LLPS-Scc-0565Schizosaccharomyces cryophilus37.46e-1781.3
LLPS-Asm-1791Astyanax mexicanus37.214e-28 117
LLPS-Mod-0291Monodelphis domestica37.149e-31 124
LLPS-Ten-0488Tetraodon nigroviridis37.074e-1887.4
LLPS-Fec-0755Felis catus37.075e-28 116
LLPS-Bot-0191Bos taurus37.072e-28 117
LLPS-Ran-1208Rattus norvegicus37.079e-28 115
LLPS-Mum-1927Mus musculus37.075e-28 116
LLPS-Asg-0559Ashbya gossypii37.023e-1680.1
LLPS-Beb-0004Beauveria bassiana36.843e-1577.4
LLPS-Caf-0070Canis familiaris36.827e-29 119
LLPS-Osl-0642Ostreococcus lucimarinus36.821e-25 108
LLPS-Otg-0007Otolemur garnettii36.682e-27 115
LLPS-Lac-0864Latimeria chalumnae36.621e-28 117
LLPS-Tum-0693Tuber melanosporum36.573e-1577.0
LLPS-Orc-0124Oryctolagus cuniculus36.524e-28 117
LLPS-Mup-1877Mustela putorius furo36.299e-28 115
LLPS-Trr-0929Trichoderma reesei36.221e-1680.9
LLPS-Usm-0006Ustilago maydis36.19e-25 107
LLPS-Icp-0880Ictalurus punctatus35.935e-27 113
LLPS-Scj-0021Schizosaccharomyces japonicus35.882e-1371.6
LLPS-Ved-0251Verticillium dahliae35.828e-0649.7
LLPS-Scm-1799Scophthalmus maximus35.741e-1580.9
LLPS-Leo-0555Lepisosteus oculatus35.711e-26 112
LLPS-Trv-0094Trichoderma virens35.687e-1884.3
LLPS-Tar-0838Takifugu rubripes35.596e-1681.3
LLPS-Lem-0236Leptosphaeria maculans35.563e-1063.5
LLPS-Chc-0195Chondrus crispus35.536e-27 112
LLPS-Mao-0345Magnaporthe oryzae35.467e-1164.7
LLPS-Sac-1299Saccharomyces cerevisiae35.169e-1473.2
LLPS-Cis-0900Ciona savignyi35.138e-31 124
LLPS-Scf-0153Scleropages formosus34.974e-1269.7
LLPS-Gag-0811Gaeumannomyces graminis34.465e-1370.9
LLPS-Pug-0231Puccinia graminis34.292e-23 102
LLPS-Cii-0127Ciona intestinalis34.281e-28 117
LLPS-Fuo-0425Fusarium oxysporum34.232e-1680.1
LLPS-Fuv-0539Fusarium verticillioides34.232e-1680.1
LLPS-Gas-0345Galdieria sulphuraria34.081e-1887.4
LLPS-Scp-0873Schizosaccharomyces pombe33.855e-1267.4
LLPS-Orn-0781Oreochromis niloticus33.818e-25 107
LLPS-Paa-1878Papio anubis33.723e-1064.7
LLPS-Ora-1429Ornithorhynchus anatinus33.73e-2299.4
LLPS-Cog-0355Colletotrichum gloeosporioides33.518e-1781.3
LLPS-Map-0448Magnaporthe poae33.337e-1267.4
LLPS-Put-0136Puccinia triticina33.214e-2196.7
LLPS-Zyt-0150Zymoseptoria tritici33.085e-0755.5
LLPS-Drm-1025Drosophila melanogaster32.913e-1785.1
LLPS-Coo-0763Colletotrichum orbiculare32.612e-1474.7
LLPS-Ast-0106Aspergillus terreus32.322e-0755.1
LLPS-Phn-0106Phaeosphaeria nodorum32.031e-0652.4
LLPS-Nec-0704Neurospora crassa32.03e-1268.6
LLPS-Kop-0469Komagataella pastoris31.872e-1166.2
LLPS-Miv-0059Microbotryum violaceum31.83e-2093.6
LLPS-Mel-0285Melampsora laricipopulina30.833e-1991.3
LLPS-Fus-0548Fusarium solani30.813e-1577.4
LLPS-Cym-0300Cyanidioschyzon merolae30.041e-1476.3
LLPS-Yal-0663Yarrowia lipolytica29.91e-1167.0
LLPS-Asc-0537Aspergillus clavatus29.77e-1473.6
LLPS-Abg-0603Absidia glauca29.513e-1887.4
LLPS-Aso-0569Aspergillus oryzae29.57e-0650.4
LLPS-Asf-0463Aspergillus flavus29.57e-0650.4
LLPS-Blg-0744Blumeria graminis28.952e-0960.8