LLPS-Xet-1524
itgb1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Integrin beta |
Gene Name: | itgb1 |
Ensembl Gene: | ENSXETG00000026716.2 |
Ensembl Protein: | ENSXETP00000048743.3 |
Organism: | Xenopus tropicalis |
Taxa ID: | 8364 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSXETT00000048743.3 | ENSXETP00000048743.3 |
UniProt | Q6P4X1, Q6P4X1_XENTR | |
GeneBank | AAMC01094432, AAMC01094431, BC063214, AAMC01094430 | , AAH63214.1 |
RefSeq | NM_203829.1 | NP_989160.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MARYSVLTFG LLTCLALCIN AQQGGTECLK ANAKSCGECI QAGPNCGWCT KVNFLQEGEP 60 61 TSARCDDLAA LKNKGCPEED IQNPRGRKQK LKDIPITNKG KGERMDPANI TQIRPQQLVF 120 121 ELRSGEPQTF NLTFRRAEDY PIDLYYLMDL SFSMKDDLEN VKSLGTALMT EMEKITSDFR 180 181 IGFGSFVEKT VMPYISTTPA KLINPCTSDQ NCTSPFSYKN VLNLTSDGKL FNDLVGKQQI 240 241 SGNLDSPEGG FDAIMQVAVC GEQIGWRNVT RLLVFSTDAG FHFAGDGKLG GIVLPNDGKC 300 301 HLHGNMYTMS HYYDYPSIAH LVQKLSENNI QTIFAVTEDF QPVYQELKNL IPKSAVGTLS 360 361 SNSSNVIQLI IDSYNSLSSE LILENSKLPE GVTISYKSFC KNGVKGTGED GRKCSNISIG 420 421 DQVEFEISVT AHKCPKKGQA ESIKIKPLGF TEEVEIVLQF ICECDCQEKG TPNSPECHHG 480 481 NGTFECGACR CNEGRIGKEC ECSTDEVNSE DMDAYCRREN SSEICSNNGD CICGQCVCKK 540 541 RDNPNEVYSG KYCECDNFNC DRSNGLICGG KGVCKCRVCE CFPNYSGSAC DCSEDTSTCM 600 601 AKNGQICNGR GICDCGRCKC TDPKFQGPTC ELCQTCVGVC TEHKECVQCR AFQKGEKQEV 660 661 CLEQCMHFNI SLVESREDLP QPGQAEALTH CKEKDAEDCW FYFTYSVDSK NEVLVHVVKE 720 721 PECPSGPDII PIVAGVVAGI VLIGLALLLI WKLLMIIHDR REFAKFEKEK MNAKWDTGEN 780 781 PIYKSAVTTV VNPKYEGK 798 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCCCGTT ATTCAGTATT GACGTTTGGA TTACTTACTT GTTTGGCTTT GTGCATAAAT 60 61 GCCCAGCAAG GTGGGACAGA ATGTCTAAAA GCAAATGCCA AATCATGTGG AGAATGTATT 120 121 CAAGCCGGGC CCAACTGCGG CTGGTGCACT AAAGTGAACT TCTTACAAGA AGGAGAGCCC 180 181 ACGTCAGCAC GTTGTGACGA TTTGGCTGCT TTGAAAAACA AAGGCTGCCC TGAAGAAGAC 240 241 ATCCAAAACC CCAGGGGACG TAAACAAAAG CTAAAAGATA TCCCAATAAC AAACAAAGGG 300 301 AAAGGAGAAC GTATGGACCC TGCAAACATC ACCCAAATCC GACCTCAACA ACTGGTATTC 360 361 GAACTGCGAT CAGGTGAACC CCAGACATTT AATTTGACAT TCAGAAGAGC AGAAGACTAT 420 421 CCAATTGACC TGTACTATCT TATGGACCTC TCATTTTCTA TGAAAGATGA CTTGGAGAAC 480 481 GTTAAAAGCC TTGGAACAGC ACTAATGACA GAAATGGAGA AAATTACTTC AGATTTCCGG 540 541 ATAGGTTTTG GCTCTTTTGT GGAAAAAACA GTCATGCCCT ACATAAGCAC CACTCCTGCC 600 601 AAGCTTATTA ACCCATGCAC AAGTGATCAG AATTGCACCA GCCCATTCAG CTATAAAAAT 660 661 GTCCTCAACC TCACTAGCGA CGGAAAGTTG TTTAACGACC TGGTAGGCAA GCAGCAGATC 720 721 TCCGGTAACT TGGATTCTCC CGAGGGAGGC TTTGATGCAA TTATGCAGGT TGCGGTCTGT 780 781 GGTGAGCAAA TTGGTTGGAG AAATGTCACA CGCTTGCTGG TCTTCTCAAC TGACGCAGGA 840 841 TTCCATTTTG CCGGAGATGG AAAATTAGGC GGCATTGTAT TGCCAAATGA TGGCAAATGT 900 901 CATTTGCATG GGAACATGTA CACAATGAGC CACTATTATG ACTATCCCTC AATTGCTCAC 960 961 CTAGTTCAGA AACTTAGTGA AAACAACATT CAGACCATTT TTGCTGTTAC AGAGGATTTC 1020 1021 CAGCCAGTCT ACCAGGAGCT GAAAAATCTG ATACCAAAAT CAGCTGTGGG AACCTTGTCG 1080 1081 TCAAATTCCA GCAATGTGAT TCAACTGATT ATTGACTCCT ATAATTCTCT TTCCTCTGAA 1140 1141 CTTATTTTGG AAAACAGCAA ATTGCCAGAG GGTGTAACAA TCAGCTATAA ATCATTCTGT 1200 1201 AAGAATGGAG TCAAGGGAAC TGGGGAGGAT GGAAGGAAAT GTTCAAACAT TTCTATTGGA 1260 1261 GATCAGGTGG AATTTGAAAT TAGTGTGACA GCTCACAAGT GCCCCAAAAA AGGACAAGCG 1320 1321 GAATCCATAA AAATCAAACC ACTTGGATTT ACCGAAGAAG TAGAGATTGT TCTCCAGTTC 1380 1381 ATCTGTGAAT GTGATTGCCA GGAAAAAGGG ACGCCCAACA GCCCTGAATG TCATCATGGA 1440 1441 AATGGAACAT TCGAATGTGG TGCCTGCAGA TGTAATGAGG GGCGCATTGG GAAGGAGTGT 1500 1501 GAATGCAGCA CCGATGAAGT AAACAGCGAA GATATGGACG CTTATTGTCG AAGAGAAAAT 1560 1561 AGCTCTGAAA TCTGCAGTAA CAACGGGGAC TGTATATGCG GCCAGTGTGT GTGCAAAAAA 1620 1621 CGGGACAATC CCAATGAAGT TTACTCCGGC AAGTACTGTG AATGCGACAA CTTCAACTGT 1680 1681 GACAGATCCA ATGGGCTGAT TTGTGGAGGT AAAGGCGTGT GCAAGTGTCG AGTATGTGAA 1740 1741 TGTTTCCCCA ATTACTCCGG CAGTGCTTGT GACTGCTCAG AGGATACCTC CACTTGTATG 1800 1801 GCAAAAAATG GCCAGATATG TAACGGGAGA GGAATATGTG ACTGTGGAAG GTGTAAATGT 1860 1861 ACAGATCCTA AATTCCAAGG ACCAACCTGT GAACTGTGTC AGACCTGCGT TGGTGTTTGT 1920 1921 ACGGAGCACA AAGAATGTGT CCAGTGCCGA GCTTTCCAGA AAGGAGAGAA GCAAGAAGTA 1980 1981 TGCCTGGAGC AGTGCATGCA CTTTAACATC TCTTTAGTGG AAAGTCGGGA AGACTTGCCC 2040 2041 CAGCCAGGCC AGGCAGAAGC CCTCACACAC TGTAAGGAAA AGGATGCAGA AGACTGCTGG 2100 2101 TTTTACTTCA CGTATTCAGT CGATTCAAAG AATGAAGTTC TGGTGCATGT GGTGAAGGAG 2160 2161 CCAGAGTGTC CCAGCGGTCC TGACATCATT CCTATTGTCG CCGGTGTGGT TGCTGGCATT 2220 2221 GTGCTCATCG GACTGGCACT GTTGCTCATA TGGAAACTGC TTATGATCAT TCACGACAGA 2280 2281 AGGGAGTTTG CCAAGTTCGA GAAGGAGAAA ATGAACGCTA AATGGGACAC TGGCGAAAAT 2340 2341 CCCATCTACA AGAGCGCCGT GACAACCGTG GTGAATCCTA AATATGAGGG AAAATGA 2397 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Fia-1331 | Ficedula albicollis | 86.94 | 0.0 | 1052 |
LLPS-Tag-2959 | Taeniopygia guttata | 84.07 | 0.0 | 1255 |
LLPS-Meg-3107 | Meleagris gallopavo | 83.69 | 0.0 | 1262 |
LLPS-Anp-2821 | Anas platyrhynchos | 83.35 | 0.0 | 1250 |
LLPS-Ora-1844 | Ornithorhynchus anatinus | 82.87 | 0.0 | 1248 |
LLPS-Gaga-1372 | Gallus gallus | 82.62 | 0.0 | 1241 |
LLPS-Poa-4109 | Pongo abelii | 81.8 | 0.0 | 1226 |
LLPS-Sah-3798 | Sarcophilus harrisii | 81.75 | 0.0 | 1217 |
LLPS-Myl-3058 | Myotis lucifugus | 81.64 | 0.0 | 1233 |
LLPS-Chs-2653 | Chlorocebus sabaeus | 81.13 | 0.0 | 1224 |
LLPS-Sus-4568 | Sus scrofa | 81.13 | 0.0 | 1226 |
LLPS-Rhb-1906 | Rhinopithecus bieti | 81.13 | 0.0 | 1228 |
LLPS-Aim-3330 | Ailuropoda melanoleuca | 81.01 | 0.0 | 1229 |
LLPS-Otg-3059 | Otolemur garnettii | 81.01 | 0.0 | 1196 |
LLPS-Urm-3846 | Ursus maritimus | 81.01 | 0.0 | 1228 |
LLPS-Ict-2309 | Ictidomys tridecemlineatus | 81.01 | 0.0 | 1223 |
LLPS-Caf-3944 | Canis familiaris | 81.01 | 0.0 | 1227 |
LLPS-Ova-4318 | Ovis aries | 81.0 | 0.0 | 1229 |
LLPS-Mup-1276 | Mustela putorius furo | 80.88 | 0.0 | 1225 |
LLPS-Orc-1714 | Oryctolagus cuniculus | 80.88 | 0.0 | 1216 |
LLPS-Loa-3509 | Loxodonta africana | 80.75 | 0.0 | 1223 |
LLPS-Mum-4498 | Mus musculus | 80.63 | 0.0 | 1216 |
LLPS-Tut-0291 | Tursiops truncatus | 80.62 | 0.0 | 1181 |
LLPS-Ran-4642 | Rattus norvegicus | 80.5 | 0.0 | 1212 |
LLPS-Mod-4118 | Monodelphis domestica | 80.43 | 0.0 | 1192 |
LLPS-Dio-1851 | Dipodomys ordii | 80.38 | 0.0 | 1210 |
LLPS-Fud-4125 | Fukomys damarensis | 80.33 | 0.0 | 1200 |
LLPS-Pes-1674 | Pelodiscus sinensis | 80.33 | 0.0 | 1179 |
LLPS-Caj-0193 | Callithrix jacchus | 80.3 | 0.0 | 1212 |
LLPS-Lac-3553 | Latimeria chalumnae | 80.25 | 0.0 | 1191 |
LLPS-Eqc-1247 | Equus caballus | 80.13 | 0.0 | 1207 |
LLPS-Maf-2664 | Macaca fascicularis | 80.05 | 0.0 | 1202 |
LLPS-Paa-4591 | Papio anubis | 80.05 | 0.0 | 1202 |
LLPS-Man-0394 | Macaca nemestrina | 80.05 | 0.0 | 1202 |
LLPS-Aon-4010 | Aotus nancymaae | 80.0 | 0.0 | 1207 |
LLPS-Bot-3526 | Bos taurus | 80.0 | 0.0 | 1204 |
LLPS-Fec-4276 | Felis catus | 80.0 | 0.0 | 1207 |
LLPS-Nol-4242 | Nomascus leucogenys | 80.0 | 0.0 | 1203 |
LLPS-Cas-1845 | Carlito syrichta | 79.8 | 0.0 | 1196 |
LLPS-Mam-1671 | Macaca mulatta | 79.75 | 0.0 | 1201 |
LLPS-Gog-2765 | Gorilla gorilla | 79.62 | 0.0 | 1203 |
LLPS-Pat-2744 | Pan troglodytes | 79.62 | 0.0 | 1204 |
LLPS-Pap-0262 | Pan paniscus | 79.62 | 0.0 | 1203 |
LLPS-Hos-2275 | Homo sapiens | 79.62 | 0.0 | 1203 |
LLPS-Cap-1600 | Cavia porcellus | 79.62 | 0.0 | 1201 |
LLPS-Anc-3926 | Anolis carolinensis | 78.99 | 0.0 | 1175 |
LLPS-Cea-4515 | Cercocebus atys | 78.16 | 0.0 | 1164 |
LLPS-Leo-2024 | Lepisosteus oculatus | 76.74 | 0.0 | 1139 |
LLPS-Scf-3688 | Scleropages formosus | 76.12 | 0.0 | 1111 |
LLPS-Orn-2216 | Oreochromis niloticus | 75.54 | 0.0 | 1101 |
LLPS-Scm-3707 | Scophthalmus maximus | 75.29 | 0.0 | 1103 |
LLPS-Asm-2261 | Astyanax mexicanus | 75.26 | 0.0 | 1112 |
LLPS-Dar-4162 | Danio rerio | 74.97 | 0.0 | 1127 |
LLPS-Icp-3840 | Ictalurus punctatus | 74.87 | 0.0 | 1100 |
LLPS-Gaa-3273 | Gasterosteus aculeatus | 74.65 | 0.0 | 1093 |
LLPS-Ten-2729 | Tetraodon nigroviridis | 73.21 | 0.0 | 1073 |
LLPS-Tar-1760 | Takifugu rubripes | 73.08 | 0.0 | 1080 |
LLPS-Orl-1840 | Oryzias latipes | 72.97 | 0.0 | 1088 |
LLPS-Mal-2254 | Mandrillus leucophaeus | 71.95 | 0.0 | 1072 |
LLPS-Xim-1230 | Xiphophorus maculatus | 70.4 | 0.0 | 1051 |
LLPS-Pof-2525 | Poecilia formosa | 69.21 | 0.0 | 1043 |
LLPS-Cae-1521 | Caenorhabditis elegans | 42.27 | 0.0 | 546 |
LLPS-Cii-0447 | Ciona intestinalis | 41.62 | 8e-148 | 457 |
LLPS-Drm-2251 | Drosophila melanogaster | 40.26 | 2e-168 | 515 |
LLPS-Cis-1494 | Ciona savignyi | 36.74 | 4e-138 | 435 |