LLPS-Pat-2744
ITGB1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Integrin beta |
| Gene Name: | ITGB1, CK820_G0018786 |
| Ensembl Gene: | ENSPTRG00000002413.7 |
| Ensembl Protein: | ENSPTRP00000004110.3 |
| Organism: | Pan troglodytes |
| Taxa ID: | 9598 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSPTRT00000004453.4 | ENSPTRP00000004110.3 |
| Ensembl | ENSPTRT00000091451.1 | ENSPTRP00000069754.1 |
| UniProt | A0A2I3RYR8, A0A2I3RYR8_PANTR, A0A2J8MN39 | |
| GeneBank | NBAG03000250, AACZ04070690 | , PNI60936.1 |
| RefSeq | XM_009458229.2, XM_016962974.1, XM_016962975.1 | XP_009456504.1, XP_016818463.1, XP_016818464.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MNLRPIFWIG LISSVCCVFA QTDENRCLKA NAKSCGECIQ AGPNCGWCTN STFLQEGMPT 60 61 SARCDDLEAL KKKGCPLDDI ENPRGSKDIK KNKNVTNRSK GTAEKLKPED ITQIQPQQLV 120 121 LRLRSGEPQT FTLKFKRAED YPIDLYYLMD LSYSMKDDLE NVKSLGTDLM NEMRRITSDF 180 181 RIGFGSFVEK TVMPYISTTP AKLRNPCTSE QNCTSPFSYK NVLSLTNKGE IFNELVGKQR 240 241 ISGNLDSPEG GFDAIMQVAV CGSLIGWRNV TRLLVFSTDA GFHFAGDGKL GGIVLPNDGQ 300 301 CHLENNMYTM SHYYDYPSIA HLVQKLSENN IQTIFAVTEE FQPVYKELKN LIPKSAVGTL 360 361 SANSSNVIQL IIDAYNSLSS EVILENGKLS EGVTISYKSY CKNGVNGTGE NGRKCSNISI 420 421 GDEVQFEISI TSNKCPKKDS DSFKIRPLGF TEEVEVILQY ICECECQSEG IPESPKCHEG 480 481 NGTFECGACR CNEGRVGRHC ECSTDEVNSE DMDAYCRKEN SSEICSNNGE CVCGQCVCRK 540 541 RDNTNEIYSG KFCECDNFNC DRSNGLICGG NGVCKCRVCE CNPNYTGSAC DCSLDTSTCE 600 601 ASNGQICNGR GICECGVCKC TDPKFQGQTC EMCQTCLGVC AEHKECVQCR AFNKGEKKDT 660 661 CTQECSYFNI TKVESRDKLP QPVQPDPVSH CKEKDVDDCW FYFTYSVNGN NEVMVHVVEN 720 721 PECPTGPDII PIVAGVVAGI VLIGLALLLI WKLLMIIHDR REFAKFEKEK MNAKWDTQEN 780 781 PIYKSPINNF KNPNYGRKAG L 801 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAATTTAC GACCAATTTT CTGGATTGGA CTGATCAGTT CAGTTTGCTG TGTGTTTGCT 60 61 CAAACAGATG AAAATAGATG TTTAAAAGCA AATGCCAAAT CATGTGGAGA ATGTATACAA 120 121 GCAGGGCCAA ATTGTGGGTG GTGCACAAAT TCAACATTTT TACAGGAAGG AATGCCTACT 180 181 TCTGCACGAT GTGATGATTT AGAAGCCTTA AAAAAGAAGG GTTGTCCTCT AGATGACATA 240 241 GAAAATCCCA GAGGCTCCAA AGATATAAAG AAAAATAAAA ATGTAACCAA CCGTAGCAAA 300 301 GGAACAGCAG AGAAGCTCAA GCCAGAGGAT ATTACTCAGA TCCAACCACA GCAGTTGGTT 360 361 TTGCGATTAA GATCAGGGGA GCCACAGACA TTTACATTAA AATTCAAGAG AGCTGAAGAC 420 421 TATCCCATTG ACCTCTACTA CCTTATGGAC CTGTCTTACT CAATGAAAGA CGATTTGGAG 480 481 AATGTAAAAA GTCTTGGAAC AGATCTGATG AATGAAATGA GGAGGATTAC TTCGGACTTC 540 541 AGAATTGGAT TTGGCTCATT TGTGGAAAAG ACTGTGATGC CTTACATTAG CACAACACCA 600 601 GCTAAGCTCA GGAACCCTTG CACAAGTGAA CAGAACTGCA CCAGCCCATT TAGCTACAAA 660 661 AATGTGCTCA GTCTTACTAA TAAAGGAGAA ATATTTAATG AACTTGTTGG AAAACAGCGC 720 721 ATATCTGGAA ATTTGGATTC TCCAGAAGGT GGTTTCGATG CCATCATGCA AGTTGCAGTT 780 781 TGTGGATCAC TGATTGGCTG GAGGAATGTT ACACGGCTGC TGGTGTTTTC CACAGATGCC 840 841 GGGTTTCACT TTGCTGGAGA TGGGAAACTT GGTGGCATTG TTTTACCAAA TGATGGACAA 900 901 TGTCACCTGG AAAATAATAT GTACACAATG AGCCATTATT ATGATTATCC TTCTATTGCT 960 961 CACCTTGTCC AGAAACTGAG TGAAAATAAT ATTCAGACGA TTTTTGCAGT TACTGAAGAA 1020 1021 TTTCAGCCTG TTTACAAGGA GCTGAAAAAC TTGATCCCTA AGTCAGCAGT AGGAACATTA 1080 1081 TCTGCAAATT CTAGCAATGT AATTCAGTTG ATCATTGATG CATACAATTC CCTTTCCTCA 1140 1141 GAAGTCATTT TGGAAAACGG CAAATTGTCA GAAGGAGTAA CAATAAGTTA CAAATCTTAC 1200 1201 TGCAAGAACG GGGTGAATGG AACAGGGGAA AATGGAAGAA AATGTTCCAA TATTTCCATT 1260 1261 GGAGATGAGG TTCAATTTGA AATTAGCATA ACTTCAAATA AGTGTCCAAA AAAGGATTCT 1320 1321 GACAGCTTTA AAATTAGGCC TCTGGGCTTT ACGGAGGAAG TAGAGGTTAT TCTTCAGTAC 1380 1381 ATCTGTGAAT GTGAATGCCA AAGCGAAGGC ATCCCTGAAA GTCCCAAGTG TCATGAAGGA 1440 1441 AACGGGACAT TTGAGTGTGG CGCGTGCAGG TGCAATGAAG GGCGTGTTGG TAGACATTGT 1500 1501 GAATGCAGCA CAGATGAAGT TAACAGTGAA GACATGGATG CTTACTGCAG GAAAGAAAAC 1560 1561 AGTTCAGAAA TCTGCAGTAA CAATGGAGAG TGCGTCTGCG GACAGTGTGT TTGTAGGAAG 1620 1621 AGGGATAATA CAAATGAAAT TTATTCTGGC AAATTCTGCG AGTGTGATAA TTTCAACTGT 1680 1681 GATAGATCCA ATGGCTTAAT TTGTGGAGGA AATGGTGTTT GCAAGTGTCG TGTGTGTGAG 1740 1741 TGCAACCCCA ACTACACTGG CAGTGCATGT GACTGTTCTT TGGATACTAG TACTTGTGAA 1800 1801 GCCAGCAACG GACAGATCTG CAATGGCCGG GGCATCTGCG AGTGTGGTGT CTGTAAGTGT 1860 1861 ACAGATCCGA AGTTTCAAGG GCAAACGTGT GAGATGTGTC AGACCTGCCT TGGTGTCTGT 1920 1921 GCTGAGCATA AAGAATGTGT TCAGTGCAGA GCCTTCAATA AAGGAGAAAA GAAAGACACA 1980 1981 TGCACACAGG AATGTTCCTA TTTTAACATT ACCAAGGTAG AAAGTCGGGA CAAATTACCC 2040 2041 CAGCCGGTCC AACCTGATCC TGTGTCCCAT TGTAAGGAGA AGGATGTTGA CGACTGTTGG 2100 2101 TTCTATTTTA CGTATTCAGT GAATGGGAAC AACGAGGTCA TGGTTCATGT TGTGGAGAAT 2160 2161 CCAGAGTGTC CCACTGGTCC AGACATCATT CCAATTGTAG CTGGTGTGGT TGCTGGAATT 2220 2221 GTTCTTATTG GCCTTGCATT ACTGCTGATA TGGAAGCTTT TAATGATAAT TCATGACAGA 2280 2281 AGGGAGTTTG CTAAATTTGA AAAGGAGAAA ATGAATGCCA AATGGGACAC GGGTGAAAAT 2340 2341 CCTATTTATA AGAGTGCCGT GACAACTGTG GTCAATCCGA AGTATGAGGG AAAATGA 2397 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Pap-0262 | Pan paniscus | 99.75 | 0.0 | 1576 |
| LLPS-Gog-2765 | Gorilla gorilla | 99.63 | 0.0 | 1573 |
| LLPS-Hos-2275 | Homo sapiens | 99.63 | 0.0 | 1573 |
| LLPS-Nol-4242 | Nomascus leucogenys | 99.38 | 0.0 | 1570 |
| LLPS-Maf-2664 | Macaca fascicularis | 99.13 | 0.0 | 1565 |
| LLPS-Paa-4591 | Papio anubis | 99.13 | 0.0 | 1565 |
| LLPS-Man-0394 | Macaca nemestrina | 99.13 | 0.0 | 1565 |
| LLPS-Mam-1671 | Macaca mulatta | 99.0 | 0.0 | 1564 |
| LLPS-Poa-4109 | Pongo abelii | 98.23 | 0.0 | 1526 |
| LLPS-Caj-0193 | Callithrix jacchus | 98.13 | 0.0 | 1559 |
| LLPS-Aon-4010 | Aotus nancymaae | 98.13 | 0.0 | 1551 |
| LLPS-Chs-2653 | Chlorocebus sabaeus | 98.11 | 0.0 | 1538 |
| LLPS-Rhb-1906 | Rhinopithecus bieti | 98.11 | 0.0 | 1541 |
| LLPS-Cea-4515 | Cercocebus atys | 96.63 | 0.0 | 1514 |
| LLPS-Cas-1845 | Carlito syrichta | 95.01 | 0.0 | 1513 |
| LLPS-Fec-4276 | Felis catus | 94.63 | 0.0 | 1502 |
| LLPS-Bot-3526 | Bos taurus | 94.38 | 0.0 | 1497 |
| LLPS-Eqc-1247 | Equus caballus | 94.38 | 0.0 | 1502 |
| LLPS-Tut-0291 | Tursiops truncatus | 94.34 | 0.0 | 1450 |
| LLPS-Urm-3846 | Ursus maritimus | 93.73 | 0.0 | 1479 |
| LLPS-Caf-3944 | Canis familiaris | 93.61 | 0.0 | 1477 |
| LLPS-Mup-1276 | Mustela putorius furo | 93.48 | 0.0 | 1474 |
| LLPS-Aim-3330 | Ailuropoda melanoleuca | 93.48 | 0.0 | 1477 |
| LLPS-Sus-4568 | Sus scrofa | 93.46 | 0.0 | 1471 |
| LLPS-Otg-3059 | Otolemur garnettii | 93.33 | 0.0 | 1444 |
| LLPS-Ova-4318 | Ovis aries | 93.23 | 0.0 | 1471 |
| LLPS-Myl-3058 | Myotis lucifugus | 93.23 | 0.0 | 1472 |
| LLPS-Ict-2309 | Ictidomys tridecemlineatus | 92.98 | 0.0 | 1466 |
| LLPS-Mal-2254 | Mandrillus leucophaeus | 92.63 | 0.0 | 1435 |
| LLPS-Orc-1714 | Oryctolagus cuniculus | 92.45 | 0.0 | 1459 |
| LLPS-Cap-1600 | Cavia porcellus | 92.26 | 0.0 | 1468 |
| LLPS-Dio-1851 | Dipodomys ordii | 92.2 | 0.0 | 1450 |
| LLPS-Loa-3509 | Loxodonta africana | 91.98 | 0.0 | 1454 |
| LLPS-Fud-4125 | Fukomys damarensis | 91.42 | 0.0 | 1441 |
| LLPS-Mum-4498 | Mus musculus | 91.19 | 0.0 | 1441 |
| LLPS-Mod-4118 | Monodelphis domestica | 91.15 | 0.0 | 1417 |
| LLPS-Ran-4642 | Rattus norvegicus | 90.82 | 0.0 | 1437 |
| LLPS-Sah-3798 | Sarcophilus harrisii | 90.08 | 0.0 | 1387 |
| LLPS-Ora-1844 | Ornithorhynchus anatinus | 89.95 | 0.0 | 1409 |
| LLPS-Fia-1331 | Ficedula albicollis | 86.48 | 0.0 | 1103 |
| LLPS-Gaga-1372 | Gallus gallus | 84.35 | 0.0 | 1339 |
| LLPS-Tag-2959 | Taeniopygia guttata | 83.67 | 0.0 | 1315 |
| LLPS-Meg-3107 | Meleagris gallopavo | 83.17 | 0.0 | 1314 |
| LLPS-Anp-2821 | Anas platyrhynchos | 82.79 | 0.0 | 1311 |
| LLPS-Pes-1674 | Pelodiscus sinensis | 82.23 | 0.0 | 1269 |
| LLPS-Lac-3553 | Latimeria chalumnae | 81.07 | 0.0 | 1258 |
| LLPS-Xet-1524 | Xenopus tropicalis | 79.62 | 0.0 | 1266 |
| LLPS-Anc-3926 | Anolis carolinensis | 79.13 | 0.0 | 1214 |
| LLPS-Dar-4162 | Danio rerio | 77.78 | 0.0 | 1225 |
| LLPS-Asm-2261 | Astyanax mexicanus | 77.68 | 0.0 | 1218 |
| LLPS-Scm-3707 | Scophthalmus maximus | 76.51 | 0.0 | 1168 |
| LLPS-Icp-3840 | Ictalurus punctatus | 76.4 | 0.0 | 1194 |
| LLPS-Leo-2024 | Lepisosteus oculatus | 76.0 | 0.0 | 1196 |
| LLPS-Gaa-3273 | Gasterosteus aculeatus | 75.41 | 0.0 | 1168 |
| LLPS-Orl-1840 | Oryzias latipes | 75.16 | 0.0 | 1184 |
| LLPS-Scf-3688 | Scleropages formosus | 74.75 | 0.0 | 1156 |
| LLPS-Orn-2216 | Oreochromis niloticus | 74.45 | 0.0 | 1130 |
| LLPS-Ten-2729 | Tetraodon nigroviridis | 74.23 | 0.0 | 1131 |
| LLPS-Xim-1230 | Xiphophorus maculatus | 73.6 | 0.0 | 1143 |
| LLPS-Tar-1760 | Takifugu rubripes | 73.02 | 0.0 | 1134 |
| LLPS-Pof-2525 | Poecilia formosa | 72.99 | 0.0 | 1140 |
| LLPS-Cii-0447 | Ciona intestinalis | 43.06 | 2e-165 | 503 |
| LLPS-Drm-2251 | Drosophila melanogaster | 41.69 | 0.0 | 558 |
| LLPS-Cae-1521 | Caenorhabditis elegans | 41.4 | 0.0 | 560 |
| LLPS-Cis-1494 | Ciona savignyi | 38.6 | 1e-142 | 447 |