• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Sot-1078

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Tubulin beta chain
Ensembl Gene: PGSC0003DMG400019131
Ensembl Protein: PGSC0003DMT400049213
Organism: Solanum tuberosum
Taxa ID: 4113
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ FUNCTION

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MREILHIQGG  QCGNQIGAKF  WEVVCAEHGI  DSTGRYAGDS  DLQLERINVY  YNEATCGRFV  60
61    PRAVLMDLEP  GTMDSIRSGP  FGQIFRPDNF  VFGQSGAGNN  WAKGHYTEGA  ELIDAVLDVV  120
121   RKEAENCDCL  QGFQVCHSLG  GGTGSGMGTL  LISKIREEYP  DRMMLTFSVF  PSPKVSDTVV  180
181   EPYNATLSVH  QLVENADECM  VLDNEALYDI  CFRTLKLTTP  SFGDLNHLIS  ATMSGVTCCL  240
241   RFPGQLNSDL  RKLAVNLIPF  PRLHFFMVGF  APLTSRGSQQ  YRALTVPELT  QQMWDAKNMM  300
301   CAADPRHGRY  LTASAMFRGK  MSTKEVDEQM  LNVQNKNSSY  FVEWIPNNVK  STVCDIPPTG  360
361   LKMASTFIGN  STSIQEMFRR  VSEQFTAMFR  RKAFLHWYTG  EGMDEMEFTE  AESNMNDLVS  420
421   EYQQYQDATA  DEEGEYYEDE  DEEDVNEN  448
Nucleotide CDS Sequence (FASTA)
1     ATGTCTGGTG  TCACCTGTTG  CTTGCGTTTC  CCTGGACAGT  TGAACTCTGA  TCTTAGGAAG  60
61    TTAGCCGTGA  ATCTGATTCC  ATTCCCTAGG  CTTCACTTTT  TCATGGTTGG  TTTTGCACCA  120
121   TTGACTTCAC  GTGGTTCTCA  GCAATACCGG  GCTTTGACAG  TACCAGAGCT  TACACAGCAA  180
181   ATGTGGGATG  CCAAGAACAT  GATGTGCGCA  GCTGACCCAC  GTCATGGAAG  ATACTTGACT  240
241   GCCTCTGCTA  TGTTCAGGGG  TAAAATGAGT  ACTAAAGAGG  TGGACGAGCA  GATGCTCAAT  300
301   GTGCAAAACA  AGAACTCTTC  CTACTTTGTT  GAGTGGATTC  CAAACAATGT  CAAGTCAACT  360
361   GTTTGTGATA  TCCCACCAAC  TGGGCTTAAA  ATGGCATCTA  CCTTCATTGG  GAACTCAACA  420
421   TCCATTCAAG  AGATGTTTAG  GCGTGTGAGC  GAGCAGTTCA  CAGCTATGTT  CAGGAGAAAA  480
481   GCTTTCTTGC  ATTGGTACAC  TGGGGAAGGA  ATGGACGAGA  TGGAGTTCAC  TGAGGCAGAA  540
541   AGTAACATGA  ATGATCTGGT  TTCTGAATAT  CAGCAGTACC  AGGATGCCAC  TGCTGATGAG  600
601   GAAGGAGAAT  ATTACGAGGA  TGAAGACGAA  GAGGATGTGA  ATGAGAATTA  A  651

▼ KEYWORD

ID
Family
Coiled coil
Complete proteome
Cytoplasm
Cytoskeleton
GTP-binding
Microtubule
Nucleotide-binding
Reference proteome

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Cytoplasm
Cellular Component
Microtubule
Molecular Function
GTP binding
Molecular Function
GTPase activity
Molecular Function
Structural constituent of cytoskeleton
Biological Process
Microtubule-based process

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Nia-2298Nicotiana attenuata98.840.0 868
LLPS-Coc-0298Corchorus capsularis98.60.0 863
LLPS-Orgl-1493Oryza glumaepatula98.370.0 865
LLPS-Mua-1705Musa acuminata98.370.0 867
LLPS-Orni-1986Oryza nivara98.370.0 865
LLPS-Orb-1132Oryza barthii98.370.0 865
LLPS-Org-1638Oryza glaberrima98.370.0 865
LLPS-Orr-2087Oryza rufipogon98.370.0 865
LLPS-Orm-1412Oryza meridionalis98.370.0 865
LLPS-Ors-0495Oryza sativa98.370.0 865
LLPS-Gor-1826Gossypium raimondii98.370.0 863
LLPS-Viv-0746Vitis vinifera98.370.0 866
LLPS-Orp-1776Oryza punctata98.370.0 865
LLPS-Tra-2485Triticum aestivum98.140.0 863
LLPS-Sei-0596Setaria italica98.140.0 864
LLPS-Sol-0749Solanum lycopersicum98.140.0 865
LLPS-Bro-1375Brassica oleracea98.140.0 865
LLPS-Tru-0441Triticum urartu98.140.0 863
LLPS-Zem-0886Zea mays98.140.0 865
LLPS-Sob-1050Sorghum bicolor98.140.0 865
LLPS-Amt-0722Amborella trichopoda98.140.0 865
LLPS-Brr-2212Brassica rapa98.140.0 865
LLPS-Thc-0170Theobroma cacao97.910.0 862
LLPS-Brn-0865Brassica napus97.910.0 862
LLPS-Mae-2595Manihot esculenta97.910.0 864
LLPS-Art-1622Arabidopsis thaliana97.910.0 862
LLPS-Pot-1525Populus trichocarpa97.910.0 858
LLPS-Arl-2740Arabidopsis lyrata97.90.0 860
LLPS-Met-2573Medicago truncatula97.670.0 862
LLPS-Via-1479Vigna angularis97.670.0 862
LLPS-Lep-2324Leersia perrieri97.670.0 861
LLPS-Hea-2387Helianthus annuus97.670.0 863
LLPS-Phv-2480Phaseolus vulgaris97.670.0 862
LLPS-Prp-0745Prunus persica97.210.0 857
LLPS-Brd-1025Brachypodium distachyon96.740.0 856
LLPS-Ori-0053Oryza indica96.740.0 854
LLPS-Orbr-1904Oryza brachyantha96.740.0 851
LLPS-Hov-1115Hordeum vulgare95.810.0 848
LLPS-Glm-3016Glycine max95.810.0 848
LLPS-Cus-2392Cucumis sativus94.880.0 838
LLPS-Php-1465Physcomitrella patens94.880.0 838
LLPS-Sem-0031Selaginella moellendorffii94.190.0 838
LLPS-Chr-0860Chlamydomonas reinhardtii93.020.0 828
LLPS-Cii-2095Ciona intestinalis88.140.0 786
LLPS-Cis-0796Ciona savignyi88.140.0 786
LLPS-Icp-0893Ictalurus punctatus87.910.0 785
LLPS-Asm-3759Astyanax mexicanus87.910.0 786
LLPS-Leo-2361Lepisosteus oculatus87.910.0 786
LLPS-Xet-1448Xenopus tropicalis87.910.0 785
LLPS-Scm-0259Scophthalmus maximus87.910.0 785
LLPS-Dar-2929Danio rerio87.910.0 785
LLPS-Fud-3138Fukomys damarensis87.880.0 782
LLPS-Gaga-0553Gallus gallus87.880.0 782
LLPS-Scf-3711Scleropages formosus87.820.0 779
LLPS-Bot-4278Bos taurus87.820.0 779
LLPS-Caj-2185Callithrix jacchus87.820.0 779
LLPS-Chs-0448Chlorocebus sabaeus87.820.0 779
LLPS-Mum-1755Mus musculus87.820.0 779
LLPS-Mea-3878Mesocricetus auratus87.820.0 779
LLPS-Sah-3322Sarcophilus harrisii87.820.0 779
LLPS-Anc-3698Anolis carolinensis87.820.0 779
LLPS-Ict-2948Ictidomys tridecemlineatus87.820.0 779
LLPS-Cap-3489Cavia porcellus87.820.0 779
LLPS-Caf-3592Canis familiaris87.820.0 779
LLPS-Mam-0567Macaca mulatta87.820.0 779
LLPS-Rhb-2745Rhinopithecus bieti87.820.0 777
LLPS-Mod-3852Monodelphis domestica87.820.0 779
LLPS-Fec-0114Felis catus87.820.0 779
LLPS-Lac-4047Latimeria chalumnae87.820.0 779
LLPS-Hos-2792Homo sapiens87.820.0 779
LLPS-Man-4381Macaca nemestrina87.820.0 779
LLPS-Orn-2508Oreochromis niloticus87.790.0 777
LLPS-Ran-2428Rattus norvegicus87.590.0 775
LLPS-Myl-2541Myotis lucifugus87.590.0 775
LLPS-Maf-3352Macaca fascicularis87.590.0 777
LLPS-Sus-1819Sus scrofa87.590.0 775
LLPS-Aon-3799Aotus nancymaae87.590.0 775
LLPS-Cea-0463Cercocebus atys87.590.0 775
LLPS-Otg-1654Otolemur garnettii87.590.0 775
LLPS-Orc-3339Oryctolagus cuniculus87.590.0 775
LLPS-Pat-0017Pan troglodytes87.590.0 775
LLPS-Pap-1145Pan paniscus87.590.0 775
LLPS-Xim-1769Xiphophorus maculatus87.440.0 783
LLPS-Gaa-1344Gasterosteus aculeatus87.440.0 782
LLPS-Pof-0256Poecilia formosa87.440.0 783
LLPS-Ova-2492Ovis aries87.410.0 778
LLPS-Mal-0435Mandrillus leucophaeus87.410.0 778
LLPS-Dio-3081Dipodomys ordii87.410.0 778
LLPS-Gog-0740Gorilla gorilla87.410.0 778
LLPS-Cas-0144Carlito syrichta87.410.0 778
LLPS-Nol-3585Nomascus leucogenys87.410.0 778
LLPS-Poa-2450Pongo abelii87.410.0 778
LLPS-Urm-3705Ursus maritimus87.410.0 778
LLPS-Aim-3912Ailuropoda melanoleuca87.210.0 781
LLPS-Mup-4432Mustela putorius furo87.210.0 781
LLPS-Paa-4095Papio anubis87.210.0 781
LLPS-Tut-2274Tursiops truncatus87.210.0 781
LLPS-Orl-0208Oryzias latipes87.210.0 781
LLPS-Fia-0318Ficedula albicollis87.210.0 781
LLPS-Ten-2857Tetraodon nigroviridis87.120.0 773
LLPS-Ora-3257Ornithorhynchus anatinus86.980.0 780
LLPS-Pes-0306Pelodiscus sinensis86.980.0 779
LLPS-Tag-2634Taeniopygia guttata86.740.0 778
LLPS-Tar-2601Takifugu rubripes86.510.0 778
LLPS-Cae-1271Caenorhabditis elegans86.510.0 776