LLPS-Chr-0860
TUB1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Tubulin beta chain |
| Gene Name: | TUB1, TUB2, CHLRE_12g542250v5, CHLRE_12g549550v5, CHLREDRAFT_129868, CHLREDRAFT_129876 |
| Ensembl Gene: | CHLRE_12g542250v5 |
| Ensembl Protein: | PNW76245 |
| Organism: | Chlamydomonas reinhardtii |
| Taxa ID: | 3055 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ FUNCTION
| Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNW76245 | PNW76245 |
| UniProt | A8IXZ0, A8IXZ0_CHLRE | |
| GeneBank | DS496127, CM008973 | PNW76245.1, EDP02933.1, EDP03008.1, PNW76052.1 |
| RefSeq | XM_001693945.1, XM_001694020.1 | XP_001693997.1, XP_001694072.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MREIVHIQGG QCGNQIGAKF WEVVSDEHGI DPTGTYHGDS DLQLERINVY FNEATGGRYV 60 61 PRAILMDLEP GTMDSVRSGP YGQIFRPDNF VFGQTGAGNN WAKGHYTEGA ELIDSVLDVV 120 121 RKEAESCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMLTFSVV PSPKVSDTVV 180 181 EPYNATLSVH QLVENADECM VLDNEALYDI CFRTLKLTTP TFGDLNHLIS AVMSGITCCL 240 241 RFPGQLNADL RKLAVNLIPF PRLHFFMVGF TPLTSRGSQQ YRALTVPELT QQMWDAKNMM 300 301 CAADPRHGRY LTASALFRGR MSTKEVDEQM LNVQNKNSSY FVEWIPNNVK SSVCDIPPKG 360 361 LKMSATFIGN STAIQEMFKR VSEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS 420 421 EYQQYQDASA EEEGEFEGEE EEA 443 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCGTGAGA TCGTCCACAT CCAGGGTGGC CAGTGCGGCA ACCAGATTGG TGCTAAGTTC 60 61 TGGGAGGTCG TCTCCGACGA GCACGGCATC GACCCCACCG GCACCTACCA TGGCGACTCC 120 121 GACCTGCAGC TGGAGCGCAT CAACGTGTAC TTCAACGAGG CCACCGGCGG CCGCTACGTG 180 181 CCCCGCGCCA TCCTGATGGA CCTGGAGCCC GGCACCATGG ATTCCGTGCG CTCGGGCCCC 240 241 TACGGCCAGA TTTTCCGCCC GGACAACTTC GTGTTCGGCC AGACCGGTGC CGGCAACAAC 300 301 TGGGCCAAGG GCCACTACAC CGAGGGCGCT GAGCTGATTG ACTCCGTGCT GGACGTCGTC 360 361 CGCAAGGAGG CTGAGAGCTG CGACTGCCTG CAGGGCTTCC AGGTTTGCCA CTCTCTGGGT 420 421 GGTGGCACTG GCTCCGGCAT GGGCACCCTG CTGATCTCCA AGATCCGTGA GGAGTACCCC 480 481 GACCGCATGA TGCTGACCTT CTCGGTCGTG CCCTCGCCCA AGGTGTCCGA CACCGTGGTG 540 541 GAGCCCTACA ACGCCACCCT GTCGGTGCAC CAGCTGGTCG AGAACGCCGA TGAGTGCATG 600 601 GTCCTGGACA ACGAGGCCCT GTACGACATC TGCTTCCGCA CCCTGAAGCT GACCACCCCC 660 661 ACCTTCGGCG ACCTGAACCA CCTGATCAGC GCCGTCATGT CGGGCATCAC CTGCTGCCTG 720 721 CGCTTCCCCG GCCAGCTGAA CGCTGACCTG CGCAAGCTGG CGGTGAACCT GATCCCCTTC 780 781 CCCCGCCTGC ACTTCTTCAT GGTCGGCTTC ACCCCCCTGA CCAGCCGCGG CAGCCAGCAG 840 841 TACCGCGCCC TGACCGTCCC CGAGCTGACC CAGCAGATGT GGGACGCCAA GAACATGATG 900 901 TGCGCCGCCG ACCCCCGCCA CGGCCGCTAC CTGACTGCCT CGGCCCTGTT CCGCGGCCGC 960 961 ATGTCGACCA AGGAGGTGGA CGAGCAGATG CTGAACGTGC AGAACAAGAA CTCGTCGTAC 1020 1021 TTCGTCGAGT GGATCCCCAA CAACGTCAAG TCTTCCGTGT GCGATATCCC GCCCAAGGGC 1080 1081 CTGAAGATGT CCGCCACCTT CATCGGCAAC TCGACCGCCA TCCAGGAGAT GTTCAAGCGC 1140 1141 GTGTCTGAGC AGTTCACTGC CATGTTCCGC CGCAAGGCTT TCCTGCACTG GTACACCGGT 1200 1201 GAGGGCATGG ACGAGATGGA GTTCACTGAG GCTGAGTCCA ACATGAACGA CCTGGTGTCC 1260 1261 GAGTACCAGC AGTACCAGGA CGCCTCCGCC GAGGAGGAGG GCGAGTTCGA GGGTGAGGAG 1320 1321 GAGGAGGCCT AA 1332 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Microtubule | |
Molecular Function | GTP binding | |
Molecular Function | GTPase activity | |
Molecular Function | Structural constituent of cytoskeleton | |
Biological Process | Microtubule cytoskeleton organization | |
Biological Process | Microtubule-based process | |
Biological Process | Mitotic cell cycle |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sem-1389 | Selaginella moellendorffii | 96.51 | 0.0 | 856 |
| LLPS-Php-1447 | Physcomitrella patens | 96.05 | 0.0 | 857 |
| LLPS-Orbr-1685 | Oryza brachyantha | 94.19 | 0.0 | 838 |
| LLPS-Orr-2318 | Oryza rufipogon | 93.95 | 0.0 | 836 |
| LLPS-Ors-0595 | Oryza sativa | 93.95 | 0.0 | 836 |
| LLPS-Ori-2098 | Oryza indica | 93.95 | 0.0 | 836 |
| LLPS-Orni-0558 | Oryza nivara | 93.95 | 0.0 | 836 |
| LLPS-Orp-0614 | Oryza punctata | 93.72 | 0.0 | 835 |
| LLPS-Sei-2030 | Setaria italica | 93.72 | 0.0 | 833 |
| LLPS-Glm-3016 | Glycine max | 93.72 | 0.0 | 835 |
| LLPS-Thc-0170 | Theobroma cacao | 93.72 | 0.0 | 833 |
| LLPS-Pot-1361 | Populus trichocarpa | 93.26 | 0.0 | 834 |
| LLPS-Viv-0746 | Vitis vinifera | 93.26 | 0.0 | 831 |
| LLPS-Amt-0722 | Amborella trichopoda | 93.26 | 0.0 | 832 |
| LLPS-Sob-2219 | Sorghum bicolor | 93.24 | 0.0 | 831 |
| LLPS-Tra-0043 | Triticum aestivum | 93.24 | 0.0 | 832 |
| LLPS-Orm-1694 | Oryza meridionalis | 93.02 | 0.0 | 830 |
| LLPS-Coc-0298 | Corchorus capsularis | 93.02 | 0.0 | 827 |
| LLPS-Tru-0441 | Triticum urartu | 93.02 | 0.0 | 827 |
| LLPS-Zem-1141 | Zea mays | 93.02 | 0.0 | 833 |
| LLPS-Org-0242 | Oryza glaberrima | 93.02 | 0.0 | 830 |
| LLPS-Nia-2298 | Nicotiana attenuata | 93.02 | 0.0 | 828 |
| LLPS-Mae-2595 | Manihot esculenta | 93.02 | 0.0 | 828 |
| LLPS-Sot-1078 | Solanum tuberosum | 93.02 | 0.0 | 828 |
| LLPS-Lep-1180 | Leersia perrieri | 93.02 | 0.0 | 829 |
| LLPS-Orgl-1988 | Oryza glumaepatula | 93.02 | 0.0 | 830 |
| LLPS-Orb-1767 | Oryza barthii | 93.02 | 0.0 | 830 |
| LLPS-Hea-2471 | Helianthus annuus | 93.02 | 0.0 | 828 |
| LLPS-Bro-1375 | Brassica oleracea | 92.79 | 0.0 | 827 |
| LLPS-Art-1622 | Arabidopsis thaliana | 92.79 | 0.0 | 827 |
| LLPS-Brr-2094 | Brassica rapa | 92.79 | 0.0 | 827 |
| LLPS-Brd-1025 | Brachypodium distachyon | 92.79 | 0.0 | 829 |
| LLPS-Brn-0865 | Brassica napus | 92.79 | 0.0 | 827 |
| LLPS-Mua-1705 | Musa acuminata | 92.79 | 0.0 | 826 |
| LLPS-Arl-2740 | Arabidopsis lyrata | 92.77 | 0.0 | 825 |
| LLPS-Prp-0745 | Prunus persica | 92.56 | 0.0 | 831 |
| LLPS-Gor-1826 | Gossypium raimondii | 92.56 | 0.0 | 823 |
| LLPS-Met-1712 | Medicago truncatula | 92.56 | 0.0 | 824 |
| LLPS-Phv-2480 | Phaseolus vulgaris | 92.33 | 0.0 | 823 |
| LLPS-Via-1479 | Vigna angularis | 92.33 | 0.0 | 824 |
| LLPS-Sol-0749 | Solanum lycopersicum | 92.33 | 0.0 | 824 |
| LLPS-Cus-2392 | Cucumis sativus | 92.09 | 0.0 | 824 |
| LLPS-Hov-1115 | Hordeum vulgare | 92.09 | 0.0 | 824 |
| LLPS-Mam-0567 | Macaca mulatta | 90.63 | 0.0 | 805 |
| LLPS-Cap-3489 | Cavia porcellus | 90.63 | 0.0 | 805 |
| LLPS-Caf-3592 | Canis familiaris | 90.63 | 0.0 | 805 |
| LLPS-Ict-2948 | Ictidomys tridecemlineatus | 90.63 | 0.0 | 805 |
| LLPS-Anc-3698 | Anolis carolinensis | 90.63 | 0.0 | 805 |
| LLPS-Man-4381 | Macaca nemestrina | 90.63 | 0.0 | 805 |
| LLPS-Lac-4047 | Latimeria chalumnae | 90.63 | 0.0 | 805 |
| LLPS-Mod-3852 | Monodelphis domestica | 90.63 | 0.0 | 805 |
| LLPS-Fec-0114 | Felis catus | 90.63 | 0.0 | 805 |
| LLPS-Hos-2792 | Homo sapiens | 90.63 | 0.0 | 805 |
| LLPS-Bot-4278 | Bos taurus | 90.63 | 0.0 | 805 |
| LLPS-Sah-3322 | Sarcophilus harrisii | 90.63 | 0.0 | 805 |
| LLPS-Chs-0448 | Chlorocebus sabaeus | 90.63 | 0.0 | 805 |
| LLPS-Mea-3878 | Mesocricetus auratus | 90.63 | 0.0 | 805 |
| LLPS-Mum-1755 | Mus musculus | 90.63 | 0.0 | 805 |
| LLPS-Caj-2185 | Callithrix jacchus | 90.63 | 0.0 | 805 |
| LLPS-Xet-1448 | Xenopus tropicalis | 90.47 | 0.0 | 809 |
| LLPS-Cis-0796 | Ciona savignyi | 90.47 | 0.0 | 810 |
| LLPS-Cii-2095 | Ciona intestinalis | 90.47 | 0.0 | 810 |
| LLPS-Gaga-0553 | Gallus gallus | 90.44 | 0.0 | 808 |
| LLPS-Fud-3138 | Fukomys damarensis | 90.44 | 0.0 | 808 |
| LLPS-Maf-3352 | Macaca fascicularis | 90.4 | 0.0 | 803 |
| LLPS-Rhb-2745 | Rhinopithecus bieti | 90.16 | 0.0 | 801 |
| LLPS-Scf-3711 | Scleropages formosus | 90.16 | 0.0 | 803 |
| LLPS-Orn-2508 | Oreochromis niloticus | 90.14 | 0.0 | 801 |
| LLPS-Scm-0259 | Scophthalmus maximus | 90.0 | 0.0 | 807 |
| LLPS-Dar-4256 | Danio rerio | 90.0 | 0.0 | 808 |
| LLPS-Leo-2361 | Lepisosteus oculatus | 90.0 | 0.0 | 808 |
| LLPS-Icp-0893 | Ictalurus punctatus | 90.0 | 0.0 | 808 |
| LLPS-Nol-3061 | Nomascus leucogenys | 89.77 | 0.0 | 804 |
| LLPS-Cas-3644 | Carlito syrichta | 89.77 | 0.0 | 804 |
| LLPS-Fia-0318 | Ficedula albicollis | 89.77 | 0.0 | 804 |
| LLPS-Orc-0320 | Oryctolagus cuniculus | 89.77 | 0.0 | 804 |
| LLPS-Dio-3707 | Dipodomys ordii | 89.77 | 0.0 | 804 |
| LLPS-Tut-2274 | Tursiops truncatus | 89.77 | 0.0 | 804 |
| LLPS-Mup-4432 | Mustela putorius furo | 89.77 | 0.0 | 804 |
| LLPS-Aim-3912 | Ailuropoda melanoleuca | 89.77 | 0.0 | 804 |
| LLPS-Mal-1974 | Mandrillus leucophaeus | 89.77 | 0.0 | 806 |
| LLPS-Paa-4095 | Papio anubis | 89.77 | 0.0 | 804 |
| LLPS-Ran-2690 | Rattus norvegicus | 89.77 | 0.0 | 804 |
| LLPS-Cea-0167 | Cercocebus atys | 89.77 | 0.0 | 806 |
| LLPS-Sus-2521 | Sus scrofa | 89.77 | 0.0 | 806 |
| LLPS-Asm-3759 | Astyanax mexicanus | 89.77 | 0.0 | 806 |
| LLPS-Gog-4560 | Gorilla gorilla | 89.77 | 0.0 | 806 |
| LLPS-Poa-2450 | Pongo abelii | 89.74 | 0.0 | 801 |
| LLPS-Urm-3705 | Ursus maritimus | 89.74 | 0.0 | 801 |
| LLPS-Pat-3341 | Pan troglodytes | 89.74 | 0.0 | 801 |
| LLPS-Ova-2492 | Ovis aries | 89.74 | 0.0 | 801 |
| LLPS-Aon-0745 | Aotus nancymaae | 89.74 | 0.0 | 801 |
| LLPS-Ten-2857 | Tetraodon nigroviridis | 89.7 | 0.0 | 797 |
| LLPS-Pof-2149 | Poecilia formosa | 89.7 | 0.0 | 798 |
| LLPS-Gaa-1416 | Gasterosteus aculeatus | 89.7 | 0.0 | 797 |
| LLPS-Xim-3736 | Xiphophorus maculatus | 89.7 | 0.0 | 797 |
| LLPS-Orl-3812 | Oryzias latipes | 89.7 | 0.0 | 797 |
| LLPS-Pes-0306 | Pelodiscus sinensis | 89.53 | 0.0 | 802 |
| LLPS-Ora-3257 | Ornithorhynchus anatinus | 89.53 | 0.0 | 803 |
| LLPS-Pap-1145 | Pan paniscus | 89.46 | 0.0 | 796 |
| LLPS-Otg-1654 | Otolemur garnettii | 89.46 | 0.0 | 796 |
| LLPS-Myl-2541 | Myotis lucifugus | 89.46 | 0.0 | 796 |
| LLPS-Tag-2634 | Taeniopygia guttata | 89.3 | 0.0 | 801 |
| LLPS-Ere-0293 | Erinaceus europaeus | 89.3 | 0.0 | 796 |
| LLPS-Tar-2601 | Takifugu rubripes | 88.84 | 0.0 | 800 |