LLPS-Scm-1708
SMAX5B_008851
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Putative platelet-derived growth factor receptor beta |
| Gene Name: | SMAX5B_008851 |
| Ensembl Gene: | ENSSMAG00000002643.1 |
| Ensembl Protein: | ENSSMAP00000004265.1 |
| Organism: | Scophthalmus maximus |
| Taxa ID: | 52904 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSSMAT00000004332.1 | ENSSMAP00000004265.1 |
| UniProt | A0A2U9C6F4, A0A2U9C6F4_SCOMX | |
| GeneBank | CP026255 | AWP12141.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MRRATASMLH LTVTTLLCIC VSELCCLEIT PDDKEFILAK GSSLTLTCSS FGETTWEFKR 60 61 DDVPYFQVEQ VQNVGQSYQI VQSETTSSVL TLSNVSWKHT GVYLCVDRHT GETKEVLVFV 120 121 PDTDIWFIER SHGMVTKTSE ESTIPCVVTN PNINVTLYNR DTDLPIRGHY VPSEGYKAPL 180 181 EDRTYMCRGE LNGEVKESQA FYVFSIAVPE AIDAYINASK TVLKQGEPLT VNCTVHGVEL 240 241 VHFSWDIPNG EPIAVEPLTD VLSAMSMRSY LIFPRTTVAH SGNYVCHVHE GVQDQTASAS 300 301 VNITVLERGF VDVKPSQQHN ISAKLQENVE LRVEIEAYPP PQVRWSKDGA KIQGDKTITT 360 361 SQELEIRYVS ILTLVRVRTE QKGHYTVLVT NGDDTKEVTF DLEVQVPSQI KDLSDLHLPG 420 421 KKHMVTCVAE GVPTPTIQWY SCDSMLKCSN QTAVWLPLIP KPEELGIQTS VSNSVTRKTS 480 481 LVRSQVTFHK PQQVTVRCET SNQAGLVDRR DIKLVSSTLF SQVAVLAAVL ALVVILIMSF 540 541 IILIAVWRKK PSYEIRWKVI ESVSQDGHEY IYVDPIHLPY DLAWEMPRDN LVLGRTLGSG 600 601 AFGRVVEATA YGLAHSQSST KVAVKMLKST ARRSETQALM SELKIMSHLG PNLNIVNLLG 660 661 ACTKHGPLYL VTEYCRYGDL VDYLHRNKYT FLQYYAEKNQ DDGCLISRGS TPISQRKGYV 720 721 SSGSESDGGY MDMSKDEPTV YVPMQEQIDT IKYADIQPSP YESSYQQDIY QEQDGGRLDL 780 781 VISDSASLTY DDLLGFSYQV AKGMEFLASK NCVHRDLAAR NVLICEGKLV KICDFGLARD 840 841 IMHDTNYISK GSTFLPLKWM APESIFHNLY TTLSDVWSYG ILLWEIFTLG GTPYPDLPMN 900 901 ELFYNALKRG YRMAKPAHAS DEVYDIMRKC WDEKFEKRPE FSFLVHSVGN MLADSYKKKY 960 961 NQVNDNFMKS DHPAVARTKP RLSSPFPIAN PSFGSPSPAT LSFPLDPYNQ SPSPGNLRPE 1020 1021 TDMQDVITSY NEYIIPIPDP KPEDVFTDAP SGSPASSEAL EEESDSMSQD TADTLPEEDR 1080 1081 LEETSERDAL LGSSGTPEVE DSFL 1104 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGGAGGG CGACGGCGTC CATGCTCCAT CTGACAGTTA CAACTCTCCT GTGTATCTGC 60 61 GTCTCTGAGT TGTGTTGCCT GGAGATCACG CCTGATGACA AAGAGTTCAT CCTGGCCAAG 120 121 GGGTCTTCTC TCACCCTTAC CTGCTCGAGC TTCGGGGAGA CGACCTGGGA GTTCAAGAGG 180 181 GATGATGTGC CGTATTTCCA AGTGGAACAA GTTCAAAATG TGGGTCAAAG CTACCAAATT 240 241 GTGCAAAGCG AAACCACATC CAGTGTTCTG ACTTTGTCGA ATGTGAGCTG GAAGCACACT 300 301 GGAGTGTACC TGTGCGTTGA TCGACACACT GGAGAAACTA AAGAGGTTCT TGTGTTTGTC 360 361 CCAGACACTG ATATATGGTT CATAGAGCGC TCCCATGGCA TGGTAACTAA GACCAGTGAG 420 421 GAAAGCACCA TCCCGTGTGT GGTCACCAAC CCAAACATCA ACGTCACCCT GTATAATCGG 480 481 GACACTGACC TGCCCATCAG AGGACATTAT GTTCCCAGTG AGGGGTACAA GGCACCGCTG 540 541 GAGGACAGGA CCTACATGTG TCGGGGAGAG CTGAATGGGG AGGTGAAAGA GTCTCAGGCG 600 601 TTCTACGTCT TCAGCATTGC TGTCCCTGAG GCCATCGACG CCTACATTAA TGCGTCAAAG 660 661 ACGGTCCTGA AACAGGGTGA ACCGCTGACA GTAAACTGCA CGGTGCACGG AGTGGAGCTC 720 721 GTGCATTTTT CCTGGGATAT CCCCAACGGA GAGCCTATTG CGGTGGAGCC GCTGACAGAT 780 781 GTCCTGTCGG CCATGAGCAT GCGCTCCTAC CTGATCTTCC CTCGTACCAC GGTGGCCCAC 840 841 AGCGGAAACT ACGTCTGCCA TGTCCATGAG GGTGTCCAAG ACCAGACTGC CTCTGCCAGC 900 901 GTCAACATCA CTGTGCTTGA GCGAGGCTTT GTGGATGTGA AACCTTCCCA GCAACATAAC 960 961 ATTTCAGCCA AGCTGCAAGA GAACGTGGAG CTGAGAGTTG AGATCGAAGC CTACCCTCCC 1020 1021 CCTCAGGTCC GCTGGAGCAA AGACGGTGCC AAGATCCAGG GAGACAAAAC CATCACAACC 1080 1081 AGTCAAGAGC TCGAGATCAG GTATGTCAGT ATTCTCACTT TAGTGAGGGT GAGGACGGAG 1140 1141 CAGAAAGGCC ACTACACCGT CCTTGTAACC AACGGAGATG ACACAAAGGA AGTGACCTTT 1200 1201 GACCTGGAGG TCCAAGTTCC CTCTCAGATT AAAGACCTGA GTGACCTTCA CCTCCCGGGG 1260 1261 AAGAAGCACA TGGTGACCTG TGTAGCTGAG GGGGTCCCAA CCCCGACCAT ACAGTGGTAC 1320 1321 AGCTGTGACA GCATGCTCAA GTGTAGCAAC CAGACAGCCG TCTGGCTGCC ACTGATACCA 1380 1381 AAGCCAGAGG AACTGGGCAT CCAGACCAGT GTCAGCAACA GTGTGACTCG TAAAACCAGT 1440 1441 CTGGTCCGGA GCCAGGTGAC CTTCCACAAG CCCCAGCAGG TCACAGTCCG ATGTGAGACC 1500 1501 AGCAACCAAG CAGGTCTCGT CGACAGGAGA GACATCAAAC TGGTGTCCAG CACACTGTTC 1560 1561 TCCCAGGTGG CAGTATTGGC TGCTGTTCTG GCCTTGGTGG TAATCCTTAT CATGTCTTTC 1620 1621 ATCATCCTCA TCGCTGTATG GAGGAAGAAA CCGAGCTATG AGATCAGATG GAAGGTGATA 1680 1681 GAGTCAGTGA GCCAGGATGG TCATGAGTAC ATCTACGTGG ACCCCATCCA CCTGCCCTAC 1740 1741 GACCTGGCCT GGGAAATGCC CCGAGACAAC CTGGTGCTGG GTCGCACTCT TGGATCAGGA 1800 1801 GCCTTTGGCA GGGTGGTCGA GGCAACTGCC TATGGTCTCG CTCATTCCCA GTCCAGCACA 1860 1861 AAGGTGGCAG TGAAAATGCT GAAGTCCACC GCCAGGAGGA GTGAGACCCA GGCCCTGATG 1920 1921 TCAGAGCTGA AGATCATGAG TCACCTGGGT CCTAACCTCA ACATTGTTAA CCTGCTCGGG 1980 1981 GCCTGCACCA AACATGGTCC TCTGTACCTG GTGACTGAAT ACTGTCGTTA TGGCGATCTG 2040 2041 GTGGACTACC TGCACAGGAA CAAGTACACA TTCCTGCAGT ACTATGCCGA AAAGAACCAA 2100 2101 GATGACGGCT GCCTCATCTC AAGAGGAAGC ACTCCGATCA GCCAGAGGAA AGGCTATGTG 2160 2161 TCCTCGGGGA GTGAGAGTGA CGGCGGATAC ATGGATATGA GTAAAGACGA GCCCACAGTC 2220 2221 TACGTGCCCA TGCAGGAGCA GATAGACACC ATCAAGTATG CAGACATCCA GCCTTCTCCA 2280 2281 TATGAGTCTT CCTACCAGCA AGACATTTAT CAGGAACAAG ACGGCGGCAG ATTAGACCTG 2340 2341 GTCATCAGTG ACTCTGCCAG TCTCACCTAC GATGATCTTT TGGGCTTCAG CTACCAAGTG 2400 2401 GCAAAGGGGA TGGAGTTCCT CGCTTCCAAG AATTGTGTTC ATCGAGACCT AGCTGCCAGG 2460 2461 AACGTCTTGA TCTGTGAGGG CAAACTCGTG AAGATCTGCG ACTTTGGCCT GGCCAGAGAC 2520 2521 ATCATGCATG ACACCAACTA CATCTCTAAA GGCAGCACCT TCCTGCCACT GAAGTGGATG 2580 2581 GCACCAGAAA GTATTTTCCA TAATTTGTAC ACAACCCTGA GCGATGTGTG GTCATACGGC 2640 2641 ATACTGCTTT GGGAGATTTT CACACTGGGA GGGACCCCCT ACCCTGATTT GCCCATGAAT 2700 2701 GAGTTATTCT ACAATGCTTT GAAGAGGGGC TACCGAATGG CCAAACCCGC CCACGCCTCT 2760 2761 GATGAAGTTT ATGATATCAT GAGGAAGTGC TGGGATGAGA AGTTTGAGAA GCGGCCAGAG 2820 2821 TTCTCCTTTC TGGTGCACAG TGTTGGGAAC ATGCTGGCAG ACAGCTATAA AAAGAAATAC 2880 2881 AACCAAGTCA ACGACAACTT CATGAAGAGT GACCACCCGG CAGTCGCCCG CACCAAACCC 2940 2941 AGACTCTCCT CACCCTTCCC GATCGCCAAT CCATCATTTG GCTCCCCTTC CCCCGCCACC 3000 3001 CTCTCCTTCC CACTGGATCC CTACAACCAG AGTCCGAGCC CAGGAAACTT ACGACCAGAG 3060 3061 ACAGACATGC AGGACGTTAT AACGTCATAC AACGAGTACA TCATTCCCAT CCCAGACCCC 3120 3121 AAGCCGGAGG ACGTTTTCAC CGACGCACCG TCAGGAAGCC CTGCGAGCTC CGAGGCTCTA 3180 3181 GAGGAGGAGA GCGACTCCAT GTCTCAGGAC ACGGCCGACA CTCTGCCAGA GGAGGACAGG 3240 3241 CTGGAGGAGA CCAGCGAGAG AGACGCTCTG CTGGGCTCGT CCGGGACGCC CGAGGTGGAG 3300 3301 GACAGCTTCC TGTAG 3315 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Orn-1029 | Oreochromis niloticus | 82.73 | 0.0 | 1778 |
| LLPS-Gaa-0134 | Gasterosteus aculeatus | 82.1 | 0.0 | 1680 |
| LLPS-Orl-3976 | Oryzias latipes | 79.13 | 0.0 | 1727 |
| LLPS-Xim-3937 | Xiphophorus maculatus | 77.67 | 0.0 | 1684 |
| LLPS-Pof-0451 | Poecilia formosa | 76.87 | 0.0 | 1677 |
| LLPS-Ten-2490 | Tetraodon nigroviridis | 75.96 | 0.0 | 1582 |
| LLPS-Tar-2460 | Takifugu rubripes | 75.0 | 0.0 | 1675 |
| LLPS-Xet-0772 | Xenopus tropicalis | 66.73 | 0.0 | 691 |
| LLPS-Icp-2665 | Ictalurus punctatus | 66.41 | 0.0 | 1335 |
| LLPS-Dar-0526 | Danio rerio | 66.37 | 0.0 | 1385 |
| LLPS-Asm-3327 | Astyanax mexicanus | 64.05 | 0.0 | 1347 |
| LLPS-Scf-1472 | Scleropages formosus | 63.79 | 0.0 | 1309 |
| LLPS-Leo-0588 | Lepisosteus oculatus | 60.04 | 0.0 | 1182 |
| LLPS-Mea-2263 | Mesocricetus auratus | 57.12 | 0.0 | 706 |
| LLPS-Lac-3542 | Latimeria chalumnae | 53.76 | 6e-52 | 201 |
| LLPS-Mod-2903 | Monodelphis domestica | 53.18 | 5e-52 | 200 |
| LLPS-Meg-0811 | Meleagris gallopavo | 53.18 | 2e-52 | 202 |
| LLPS-Gaga-2822 | Gallus gallus | 53.18 | 3e-52 | 202 |
| LLPS-Fia-0609 | Ficedula albicollis | 52.6 | 7e-52 | 201 |
| LLPS-Gog-1025 | Gorilla gorilla | 52.49 | 3e-52 | 202 |
| LLPS-Otg-0754 | Otolemur garnettii | 52.25 | 9e-52 | 200 |
| LLPS-Tag-2484 | Taeniopygia guttata | 50.83 | 0.0 | 951 |
| LLPS-Anp-2130 | Anas platyrhynchos | 49.62 | 0.0 | 933 |
| LLPS-Dio-3702 | Dipodomys ordii | 49.47 | 0.0 | 897 |
| LLPS-Caf-1686 | Canis familiaris | 49.18 | 0.0 | 879 |
| LLPS-Mup-3155 | Mustela putorius furo | 49.13 | 0.0 | 898 |
| LLPS-Pes-2892 | Pelodiscus sinensis | 49.1 | 0.0 | 907 |
| LLPS-Sus-3796 | Sus scrofa | 49.04 | 0.0 | 895 |
| LLPS-Fec-0650 | Felis catus | 49.04 | 0.0 | 878 |
| LLPS-Chs-0509 | Chlorocebus sabaeus | 49.03 | 0.0 | 882 |
| LLPS-Maf-4331 | Macaca fascicularis | 48.94 | 0.0 | 880 |
| LLPS-Caj-4518 | Callithrix jacchus | 48.94 | 0.0 | 880 |
| LLPS-Paa-4449 | Papio anubis | 48.94 | 0.0 | 881 |
| LLPS-Mal-3860 | Mandrillus leucophaeus | 48.94 | 0.0 | 882 |
| LLPS-Pat-3562 | Pan troglodytes | 48.94 | 0.0 | 880 |
| LLPS-Pap-4507 | Pan paniscus | 48.94 | 0.0 | 880 |
| LLPS-Hos-1287 | Homo sapiens | 48.94 | 0.0 | 879 |
| LLPS-Man-4541 | Macaca nemestrina | 48.94 | 0.0 | 882 |
| LLPS-Eqc-1925 | Equus caballus | 48.94 | 0.0 | 889 |
| LLPS-Cap-2946 | Cavia porcellus | 48.94 | 0.0 | 888 |
| LLPS-Poa-2094 | Pongo abelii | 48.94 | 0.0 | 879 |
| LLPS-Mam-3014 | Macaca mulatta | 48.94 | 0.0 | 881 |
| LLPS-Nol-2454 | Nomascus leucogenys | 48.94 | 0.0 | 879 |
| LLPS-Ova-0490 | Ovis aries | 48.89 | 0.0 | 880 |
| LLPS-Cea-2438 | Cercocebus atys | 48.84 | 0.0 | 880 |
| LLPS-Myl-1384 | Myotis lucifugus | 48.8 | 0.0 | 870 |
| LLPS-Aon-3511 | Aotus nancymaae | 48.75 | 0.0 | 879 |
| LLPS-Orc-4299 | Oryctolagus cuniculus | 48.75 | 0.0 | 879 |
| LLPS-Rhb-2400 | Rhinopithecus bieti | 48.65 | 0.0 | 868 |
| LLPS-Sah-3570 | Sarcophilus harrisii | 48.6 | 0.0 | 895 |
| LLPS-Bot-1738 | Bos taurus | 48.51 | 0.0 | 883 |
| LLPS-Ict-3094 | Ictidomys tridecemlineatus | 48.47 | 0.0 | 879 |
| LLPS-Ran-2077 | Rattus norvegicus | 48.37 | 0.0 | 900 |
| LLPS-Anc-2545 | Anolis carolinensis | 48.37 | 0.0 | 907 |
| LLPS-Loa-4578 | Loxodonta africana | 48.36 | 0.0 | 880 |
| LLPS-Cas-0326 | Carlito syrichta | 48.32 | 0.0 | 876 |
| LLPS-Aim-0494 | Ailuropoda melanoleuca | 48.18 | 0.0 | 864 |
| LLPS-Mum-3340 | Mus musculus | 48.03 | 0.0 | 885 |
| LLPS-Fud-4386 | Fukomys damarensis | 48.01 | 0.0 | 899 |
| LLPS-Ora-2029 | Ornithorhynchus anatinus | 43.85 | 0.0 | 612 |
| LLPS-Drm-0793 | Drosophila melanogaster | 37.16 | 5e-65 | 243 |