• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Sah-0404
SMARCC1

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
Gene Name: SMARCC1
Ensembl Gene: ENSSHAG00000000895.1
Ensembl Protein: ENSSHAP00000001000.1
Organism: Sarcophilus harrisii
Taxa ID: 9305
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
ChromatinPredicted from orthologs(View)

▼ CROSS REFERENCE


▼ SEQUENCE


Protein Sequence (FASTA)
1     KYKNKFFRRR  FDLQNPSRMD  RNVEMFMNIE  KTLVQNNCLS  RPNIYLIPDI  ELKLANKLKD  60
61    IVKRHQGTFT  DEKSKASHHI  YPIPTSLEDE  DWLRPVMKKD  KQVLVHWGFY  PDSYDTWVHA  120
121   SDVDAEIEDP  PIPEKPWKVH  AKWILDTDIF  NEWMNEEDYE  VDENKKPVSF  RQRISTKNEE  180
181   PVRSPERRDR  KASASTRKRK  HSPSPPPPTP  VESRKKTGKK  GQTSLYGKRR  GQKEEDEQED  240
241   LTKDMEDPTP  VPNIEEVVLP  KNVNPKKDSE  NTPVKGGTVA  DLDEQDEEAV  TAGGKEDEDP  300
301   SKGDQSRSID  PGEDNVTEQT  NHIIIPSYAS  WFDYNCIHVI  ERRALPEFFN  GKNKSKTPEI  360
361   YLAYRNFMID  TYRLNPQEYL  TSTACRRNLT  GDVCAVMRVH  AFLEQWGLVN  YQVDPESRPM  420
421   AMGPPPTPHF  NVLADTPSGL  VPLHLRTPQV  PAAQQMLNFP  EKNKEKPTDL  QNFGLRTDIY  480
481   SKKTLAKSSL  LNVDFGRQYQ  VKKTLTILLL  IHSYRREGQT  VVENCGMTQD  NCIIYLACIG  540
541   LREVVEEDSY  FTYLVCGIDP  VPRSQRLPIQ  EIVSVMGGGS  NNRLGSGRSS  RIIEHMERAD  600
601   APRIPHILLR  NSKMKSAQTY  DSSSSSSSSS  SSSSSSSSSS  SSSSSKNLDG  TEEEKMETET  660
661   DGQQAEKVEN  KSENETDENE  KTQDGENEKS  IEKEQDSEVN  EDTKSEEKDG  EENKENDACK  720
721   ERENDTGKKK  VEHEISEGNV  ATAAAAALAS  AATKAKHLAA  VEERKIKSLV  ALLVETQMKK  780
781   LEIKLRHFEE  LETIMDREKE  ALEQQRQQLL  TERQNFHMEQ  LKYAELRARQ  QMEQQQHGQN  840
841   TQQSHQHSGG  PGMNPIGAPG  HPGMLPHQQP  PPYPMMHHQM  PPPHPPQPGQ  MPGPGSMMPG  900
901   QPMPGRMIPA  VAANIHSSGG  GPPPPVMPPM  PGNIIGPRVP  LAAPNGMYPP  PPQQQPPPPP  960
961   PTDGVTPPPA  AAPASSAP  978
Nucleotide CDS Sequence (FASTA)
1     AAATATAAAA  ATAAATTTTT  CAGGAGAAGA  TTTGATCTGC  AGAATCCTTC  CCGAATGGAT  60
61    CGCAATGTGG  AGATGTTTAT  GAACATTGAA  AAAACACTGG  TTCAGAACAA  CTGTCTGAGC  120
121   AGACCTAACA  TCTACCTCAT  TCCAGACATT  GAACTGAAGT  TGGCTAACAA  ACTAAAGGAC  180
181   ATTGTCAAAC  GACATCAGGG  AACATTCACT  GATGAAAAAT  CAAAAGCCTC  TCATCACATT  240
241   TATCCTATTC  CTACCTCACT  GGAGGATGAA  GACTGGTTGA  GACCTGTGAT  GAAAAAAGAC  300
301   AAGCAGGTGC  TAGTACATTG  GGGATTTTAC  CCAGACAGCT  ACGATACTTG  GGTTCATGCT  360
361   AGTGATGTTG  ATGCTGAAAT  TGAAGATCCT  CCCATTCCAG  AAAAACCGTG  GAAAGTTCAT  420
421   GCAAAATGGA  TTTTAGACAC  TGATATCTTT  AATGAATGGA  TGAATGAAGA  AGATTATGAG  480
481   GTGGATGAAA  ACAAGAAACC  AGTTAGTTTT  CGTCAGCGCA  TTTCAACAAA  GAATGAAGAG  540
541   CCAGTCCGTA  GTCCTGAGAG  ACGAGATAGG  AAGGCATCAG  CAAGTACAAG  AAAGAGAAAA  600
601   CATTCGCCTT  CTCCTCCACC  TCCTACTCCT  GTTGAATCAA  GGAAAAAGAC  TGGAAAGAAA  660
661   GGACAAACTA  GTCTCTATGG  GAAAAGGCGA  GGTCAGAAAG  AAGAGGATGA  ACAAGAAGAT  720
721   CTCACTAAGG  ATATGGAAGA  TCCAACACCT  GTACCTAACA  TAGAGGAAGT  GGTACTTCCT  780
781   AAAAATGTGA  ATCCAAAGAA  AGACAGTGAA  AATACACCAG  TTAAAGGAGG  AACAGTAGCA  840
841   GATCTAGATG  AGCAGGATGA  AGAAGCAGTG  ACAGCAGGAG  GAAAGGAAGA  TGAGGATCCC  900
901   AGTAAAGGTG  ATCAAAGTCG  ATCAATTGAC  CCAGGTGAAG  ATAATGTAAC  AGAGCAGACA  960
961   AATCATATTA  TTATTCCAAG  TTATGCTTCA  TGGTTTGATT  ACAACTGTAT  TCATGTAATA  1020
1021  GAACGTCGTG  CTCTTCCTGA  ATTTTTCAAT  GGAAAAAACA  AATCTAAAAC  TCCAGAAATA  1080
1081  TATTTGGCAT  ACCGTAATTT  CATGATTGAC  ACATATCGCT  TAAACCCTCA  AGAATATTTG  1140
1141  ACCAGCACTG  CTTGTAGGCG  GAATTTGACA  GGAGATGTTT  GTGCTGTTAT  GAGGGTTCAT  1200
1201  GCTTTTCTAG  AACAGTGGGG  GCTTGTTAAT  TACCAAGTTG  ATCCAGAAAG  TAGACCTATG  1260
1261  GCAATGGGAC  CTCCTCCAAC  TCCTCACTTT  AATGTGCTAG  CTGATACCCC  TTCTGGGCTA  1320
1321  GTGCCTCTCC  ATCTCAGAAC  ACCTCAGGTC  CCTGCTGCTC  AGCAGATGTT  GAATTTTCCT  1380
1381  GAGAAAAATA  AGGAGAAGCC  TACTGACTTA  CAGAACTTTG  GTCTCCGCAC  AGACATTTAC  1440
1441  TCTAAGAAAA  CCTTAGCAAA  ATCAAGTTTA  TTGAATGTCG  ATTTTGGCAG  ACAATATCAA  1500
1501  GTTAAAAAGA  CTCTGACTAT  ATTGCTTTTA  ATCCATTCAT  ATAGGAGAGA  GGGGCAAACT  1560
1561  GTTGTTGAAA  ACTGTGGTAT  GACCCAAGAT  AATTGTATAA  TATATTTAGC  ATGTATTGGA  1620
1621  CTAAGGGAGG  TTGTAGAAGA  AGATTCATAT  TTCACTTATT  TGGTATGTGG  CATAGATCCT  1680
1681  GTCCCTCGTT  CTCAAAGACT  TCCAATTCAG  GAAATTGTTT  CTGTGATGGG  GGGAGGGAGT  1740
1741  AATAACAGAT  TAGGCTCAGG  AAGGAGCTCA  AGAATCATAG  AACATATGGA  GAGGGCAGAT  1800
1801  GCTCCCAGGA  TACCACACAT  CCTATTAAGA  AACAGCAAGA  TGAAATCAGC  TCAAACATAT  1860
1861  GATAGTAGTA  GTAGTAGTAG  TAGTAGTAGT  AGTAGTAGTA  GTAGTAGTAG  TAGTAGTAGT  1920
1921  AGTAGTAGTA  GTAGTAAAAA  TTTAGATGGT  ACTGAAGAAG  AAAAAATGGA  AACTGAGACA  1980
1981  GATGGACAAC  AGGCTGAAAA  GGTTGAAAAC  AAAAGTGAAA  ATGAAACTGA  TGAAAACGAG  2040
2041  AAAACACAGG  ATGGAGAAAA  TGAGAAAAGT  ATTGAGAAAG  AACAAGATAG  TGAAGTTAAT  2100
2101  GAGGATACCA  AATCAGAAGA  GAAGGATGGT  GAAGAGAATA  AGGAAAATGA  CGCCTGTAAA  2160
2161  GAGAGAGAAA  ATGATACTGG  AAAGAAGAAA  GTGGAACATG  AAATTTCTGA  AGGAAATGTA  2220
2221  GCCACAGCTG  CAGCAGCTGC  TCTTGCCTCT  GCTGCCACCA  AAGCAAAGCA  CCTTGCTGCT  2280
2281  GTAGAAGAAA  GAAAAATCAA  ATCTCTGGTG  GCCCTGCTGG  TAGAGACACA  AATGAAGAAG  2340
2341  CTGGAGATAA  AACTCCGTCA  TTTTGAGGAA  CTGGAAACAA  TCATGGATAG  GGAAAAGGAA  2400
2401  GCTTTAGAAC  AGCAGAGACA  GCAGTTACTC  ACTGAACGCC  AGAACTTTCA  CATGGAGCAG  2460
2461  CTAAAATATG  CTGAATTAAG  GGCTCGACAG  CAAATGGAGC  AGCAGCAGCA  TGGGCAGAAC  2520
2521  ACTCAGCAGT  CCCACCAGCA  TTCTGGAGGA  CCTGGTATGA  ACCCAATTGG  AGCACCAGGG  2580
2581  CATCCAGGAA  TGTTACCTCA  TCAGCAGCCC  CCTCCTTATC  CCATGATGCA  TCATCAGATG  2640
2641  CCCCCTCCTC  ATCCACCTCA  ACCAGGTCAG  ATGCCAGGTC  CTGGTTCCAT  GATGCCTGGA  2700
2701  CAGCCCATGC  CAGGTCGTAT  GATTCCAGCT  GTTGCAGCTA  ACATCCATTC  TTCTGGGGGT  2760
2761  GGTCCTCCCC  CACCTGTCAT  GCCACCAATG  CCTGGGAACA  TCATTGGACC  ACGAGTACCC  2820
2821  CTTGCAGCAC  CTAATGGCAT  GTACCCCCCT  CCTCCGCAGC  AACAGCCCCC  ACCACCTCCG  2880
2881  CCTACCGATG  GTGTCACTCC  TCCTCCTGCA  GCAGCACCAG  CCTCCTCAGC  TCCCTAA  2937

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Pes-1988Pelodiscus sinensis100.02e-1172.8
LLPS-Mea-3050Mesocricetus auratus90.563e-105 358
LLPS-Scf-2702Scleropages formosus90.299e-1996.3
LLPS-Gaga-1242Gallus gallus88.418e-1480.5
LLPS-Scm-2517Scophthalmus maximus86.272e-20 102
LLPS-Xim-1921Xiphophorus maculatus85.294e-20 100
LLPS-Lac-2608Latimeria chalumnae83.781e-20 102
LLPS-Orl-3314Oryzias latipes83.647e-1893.6
LLPS-Mod-0081Monodelphis domestica83.590.01195
LLPS-Drm-1000Drosophila melanogaster82.611e-1482.8
LLPS-Pof-0830Poecilia formosa81.651e-1999.8
LLPS-Icp-3784Ictalurus punctatus81.084e-20 100
LLPS-Ora-0725Ornithorhynchus anatinus80.02e-1887.8
LLPS-Aim-1251Ailuropoda melanoleuca79.760.01149
LLPS-Mup-2303Mustela putorius furo79.760.01145
LLPS-Man-2932Macaca nemestrina79.370.01135
LLPS-Mam-4040Macaca mulatta79.370.01135
LLPS-Cea-4701Cercocebus atys79.370.01139
LLPS-Chs-1901Chlorocebus sabaeus79.370.01140
LLPS-Maf-2868Macaca fascicularis79.260.01138
LLPS-Caf-1159Canis familiaris79.220.01139
LLPS-Dio-2841Dipodomys ordii79.210.01134
LLPS-Rhb-3281Rhinopithecus bieti79.180.01138
LLPS-Mal-0007Mandrillus leucophaeus79.150.01138
LLPS-Eqc-0455Equus caballus79.110.01147
LLPS-Pat-2962Pan troglodytes79.040.01136
LLPS-Hos-0717Homo sapiens79.040.01133
LLPS-Cap-2556Cavia porcellus79.040.01138
LLPS-Gog-1649Gorilla gorilla79.040.01137
LLPS-Ict-0470Ictidomys tridecemlineatus78.830.01139
LLPS-Aon-0727Aotus nancymaae78.720.01130
LLPS-Urm-1313Ursus maritimus78.560.01119
LLPS-Fec-2956Felis catus78.510.01138
LLPS-Ova-1332Ovis aries78.510.01146
LLPS-Caj-0268Callithrix jacchus78.50.01129
LLPS-Bot-1396Bos taurus78.280.01142
LLPS-Sus-2505Sus scrofa78.050.01132
LLPS-Loa-0086Loxodonta africana77.820.01129
LLPS-Pap-4241Pan paniscus77.630.01102
LLPS-Ran-4721Rattus norvegicus77.520.01129
LLPS-Mum-0200Mus musculus77.440.01134
LLPS-Paa-3218Papio anubis77.20.01085
LLPS-Fud-1590Fukomys damarensis76.980.01133
LLPS-Myl-1231Myotis lucifugus76.630.01098
LLPS-Nol-3439Nomascus leucogenys76.220.01059
LLPS-Cae-1556Caenorhabditis elegans73.916e-1377.4
LLPS-Anc-1181Anolis carolinensis73.790.01088
LLPS-Tag-2412Taeniopygia guttata72.20.0 693
LLPS-Orc-0310Oryctolagus cuniculus71.530.0 986
LLPS-Cii-1813Ciona intestinalis71.432e-1585.1
LLPS-Spr-0289Sporisorium reilianum70.543e-56 216
LLPS-Usm-0419Ustilago maydis70.543e-56 216
LLPS-Otg-0297Otolemur garnettii69.250.0 787
LLPS-Miv-0013Microbotryum violaceum68.222e-56 211
LLPS-Gag-0882Gaeumannomyces graminis67.444e-54 205
LLPS-Dos-0497Dothistroma septosporum67.195e-55 207
LLPS-Asfu-0435Aspergillus fumigatus66.923e-55 209
LLPS-Xet-2601Xenopus tropicalis66.590.0 955
LLPS-Cym-0096Cyanidioschyzon merolae66.03e-36 152
LLPS-Zyt-0018Zymoseptoria tritici65.624e-54 204
LLPS-Scp-1073Schizosaccharomyces pombe64.755e-47 181
LLPS-Cogr-0675Colletotrichum graminicola64.343e-52 199
LLPS-Scc-0741Schizosaccharomyces cryophilus63.932e-45 176
LLPS-Meg-1566Meleagris gallopavo63.72e-112 355
LLPS-Ast-0792Aspergillus terreus63.191e-55 209
LLPS-Asm-1481Astyanax mexicanus60.590.0 820
LLPS-Dar-1971Danio rerio60.380.0 826
LLPS-Cis-0116Ciona savignyi59.192e-86 288
LLPS-Asc-0470Aspergillus clavatus59.121e-56 213
LLPS-Scj-0844Schizosaccharomyces japonicus58.571e-47 184
LLPS-Ved-1098Verticillium dahliae58.236e-54 204
LLPS-Orn-3357Oreochromis niloticus57.760.0 736
LLPS-Abg-1454Absidia glauca57.431e-48 187
LLPS-Ten-2852Tetraodon nigroviridis56.780.0 745
LLPS-Phn-0826Phaeosphaeria nodorum56.259e-54 204
LLPS-Chc-0052Chondrus crispus56.121e-30 135
LLPS-Put-0609Puccinia triticina56.023e-54 206
LLPS-Pyt-0678Pyrenophora teres56.02e-55 209
LLPS-Mel-0378Melampsora laricipopulina55.871e-56 210
LLPS-Gaa-2380Gasterosteus aculeatus55.480.0 747
LLPS-Tar-2158Takifugu rubripes55.230.0 736
LLPS-Beb-0561Beauveria bassiana54.827e-54 204
LLPS-Asg-1524Ashbya gossypii54.697e-42 167
LLPS-Sac-0249Saccharomyces cerevisiae54.694e-42 167
LLPS-Fuo-0283Fusarium oxysporum54.262e-54 206
LLPS-Asf-0195Aspergillus flavus53.852e-56 212
LLPS-Aso-0409Aspergillus oryzae53.853e-56 211
LLPS-Kop-1036Komagataella pastoris53.851e-40 165
LLPS-Map-0694Magnaporthe poae53.263e-55 208
LLPS-Fus-0428Fusarium solani53.232e-52 200
LLPS-Mao-0698Magnaporthe oryzae52.821e-53 204
LLPS-Fuv-0181Fusarium verticillioides52.65e-54 204
LLPS-Coo-1215Colletotrichum orbiculare52.541e-52 200
LLPS-Yal-0617Yarrowia lipolytica51.374e-57 211
LLPS-Trr-1166Trichoderma reesei50.732e-55 208
LLPS-Lem-0376Leptosphaeria maculans50.03e-56 212
LLPS-Gas-1182Galdieria sulphuraria49.626e-35 148
LLPS-Amt-1280Amborella trichopoda49.443e-21 102
LLPS-Pot-2654Populus trichocarpa49.436e-2099.0
LLPS-Nef-1368Neosartorya fischeri49.062e-55 209
LLPS-Cog-0565Colletotrichum gloeosporioides48.995e-53 202
LLPS-Coc-1752Corchorus capsularis48.944e-21 102
LLPS-Orp-1362Oryza punctata48.452e-1997.1
LLPS-Org-1461Oryza glaberrima48.452e-1997.4
LLPS-Orr-2030Oryza rufipogon48.452e-1997.4
LLPS-Orm-0018Oryza meridionalis48.451e-1997.8
LLPS-Orni-1618Oryza nivara48.452e-1997.4
LLPS-Orb-2020Oryza barthii48.454e-1996.3
LLPS-Ori-1346Oryza indica48.452e-1997.4
LLPS-Orgl-1114Oryza glumaepatula48.451e-1997.4
LLPS-Blg-0673Blumeria graminis48.345e-52 199
LLPS-Mae-1765Manihot esculenta47.921e-22 106
LLPS-Dac-2291Daucus carota47.08e-22 103
LLPS-Viv-1282Vitis vinifera46.943e-21 102
LLPS-Nia-1139Nicotiana attenuata46.815e-21 102
LLPS-Sol-0652Solanum lycopersicum46.815e-21 102
LLPS-Sot-1492Solanum tuberosum46.816e-21 101
LLPS-Crn-1024Cryptococcus neoformans46.725e-53 201
LLPS-Tru-1388Triticum urartu46.671e-1689.0
LLPS-Tra-2784Triticum aestivum46.63e-21 102
LLPS-Orbr-0005Oryza brachyantha46.531e-1997.4
LLPS-Cus-2175Cucumis sativus46.392e-20 100
LLPS-Vir-0431Vigna radiata46.242e-1997.1
LLPS-Via-0994Vigna angularis46.242e-1997.4
LLPS-Prp-1433Prunus persica46.03e-2099.4
LLPS-Met-1578Medicago truncatula45.985e-1892.8
LLPS-Php-2093Physcomitrella patens45.698e-24 112
LLPS-Trv-0260Trichoderma virens45.31e-54 206
LLPS-Sem-1410Selaginella moellendorffii45.13e-22 105
LLPS-Gor-1633Gossypium raimondii45.051e-20 100
LLPS-Brn-2984Brassica napus44.834e-1790.1
LLPS-Phv-0631Phaseolus vulgaris44.791e-1997.4
LLPS-Lep-0882Leersia perrieri44.793e-1687.8
LLPS-Zem-0448Zea mays44.663e-1790.1
LLPS-Sei-1656Setaria italica44.662e-1790.5
LLPS-Hov-1252Hordeum vulgare44.555e-21 102
LLPS-Brd-1026Brachypodium distachyon44.552e-20 100
LLPS-Thc-1312Theobroma cacao44.447e-21 101
LLPS-Asn-0228Aspergillus nidulans44.241e-56 212
LLPS-Sob-0182Sorghum bicolor44.148e-1892.0
LLPS-Nec-0476Neurospora crassa43.972e-55 209
LLPS-Art-2489Arabidopsis thaliana43.686e-1789.4
LLPS-Mua-1305Musa acuminata42.864e-22 105
LLPS-Tum-0079Tuber melanosporum41.795e-56 210
LLPS-Glm-0304Glycine max41.581e-1894.7
LLPS-Hea-0404Helianthus annuus41.412e-20 100
LLPS-Brr-1501Brassica rapa41.355e-2098.6
LLPS-Bro-1521Brassica oleracea41.353e-1996.3
LLPS-Ors-0517Oryza sativa41.39e-1789.7
LLPS-Arl-2299Arabidopsis lyrata40.823e-1893.2
LLPS-Pug-1198Puccinia graminis40.558e-57 213
LLPS-Pytr-0424Pyrenophora triticirepentis40.09e-28 124