• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Icp-3784
SMARCC2

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: SWI/SNF complex subunit SMARCC2 isoform X1
Gene Name: SMARCC2, smarcc2
Ensembl Gene: ENSIPUG00000019879.1
Ensembl Protein: ENSIPUP00000029500.1
Organism: Ictalurus punctatus
Taxa ID: 7998
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Chromatin, Nuclear specklePredicted from orthologs(View)

▼ SEQUENCE


Protein Sequence (FASTA)
1     MAVRKKDGGP  NVKYFEASDT  VSQFDNVRVW  LGKNYKKYIQ  AEPPTNKSLS  SLVVQLLQFQ  60
61    EEVFGRHVSN  PPLTKLPMKS  FVDFKAGGAL  CHILAAAYKF  KSDQGWRRFD  FQNPSRMDRN  120
121   VEMFMTIEKS  LVQNNCLTRP  VIYLSSEIEP  KLLGKLKDII  KRHQGSVTDD  KQASSHVVVP  180
181   IPASLEEEEW  VRPVMKRDKQ  MLLHWGYWPD  SYDTWISASE  VEAVVEDPPS  AEKPRKVHAK  240
241   WILDLDQYNE  WMNEEDYEVG  EGGTRRKRIS  AKTLTDEVSA  PDERRDKKPA  NAKKRKRSPS  300
301   PSPTPPPQES  KKKNTKKGPT  TPYNKSKRGQ  REEEQEDLTK  DLDEPSPVPA  AEESLNKTVT  360
361   KKDSDSTPVK  GGTDGDEQED  EAMETVGKEE  DEGSASVKGE  PVKGSDLHED  NVTEQTHHII  420
421   IPSYAAWFDY  NSVHAIERRA  LPEFFNGKNK  SKTPEIYLAY  RNFMIDTYRL  NPQEYLTSTA  480
481   CRRNLAGDVC  AIMRVHAFLE  QWGLINYQVD  SESRPTPMGP  PPTSHFHVLA  DTPSSLVPLQ  540
541   PKASQTPSSQ  PILSFPDKVK  EKTTDLQNFG  LRTDMYSKKS  GPSKGKNAAS  ATREWTEQET  600
601   LLLLEGLEMY  KDDWNKVSEH  VGSRTQDECI  LHFLRLPIED  PYLEEGATAL  GPLVYQPVPF  660
661   SQAGNPVMST  VAFLASVVDP  RVASAAAKSA  LEEFSRMKEE  VPAALVEAHV  RRVEEAARVS  720
721   GRPDPLYGLE  GSGIAGTGLE  DSDKPEESSD  ESKSSDAQNT  EDKRDNSKES  KDGVSEEEEK  780
781   QGENGKKEEE  GGKEGETERE  AEKTDSDTGD  VEKEKEGKEG  SEDGQREGES  DGERKAKVER  840
841   DVGEGNLATA  AASALAAAAV  KAKHLAAVEE  RKIKSLVALL  VETQMKKLEI  KLRHFEELET  900
901   IMDREREALE  YQRQQLLADR  QAFHMEQLKY  AEMRARQQHF  QQIQHQHHSN  QPGNQPGNTP  960
961   PIPHQSAPNV  NAPPPAPSLT  PAAANTPSEA  PPTSTSHGSS  PNNIQPGAVH  DSGTALTGDS  1020
1021  LNPSGPVTPA  Q  1031
Nucleotide CDS Sequence (FASTA)
1     ATGGCGGTGC  GGAAGAAAGA  CGGCGGGCCG  AATGTGAAAT  ATTTCGAAGC  CTCTGATACC  60
61    GTGTCTCAGT  TCGACAATGT  CCGCGTGTGG  CTCGGGAAGA  ATTATAAAAA  GTATATCCAG  120
121   GCGGAGCCTC  CCACTAATAA  ATCTCTGTCC  AGTTTGGTGG  TTCAGCTGCT  GCAGTTTCAG  180
181   GAGGAAGTTT  TCGGACGACA  CGTCAGCAAT  CCTCCTCTCA  CCAAACTACC  GATGAAGAGT  240
241   TTTGTGGACT  TTAAGGCGGG  AGGAGCGCTG  TGTCACATTC  TTGCTGCTGC  TTACAAGTTC  300
301   AAAAGTGACC  AAGGATGGAG  GAGGTTCGAT  TTCCAGAATC  CTTCTAGAAT  GGACCGGAAC  360
361   GTGGAGATGT  TTATGACCAT  AGAGAAGTCT  CTGGTACAGA  ATAACTGTCT  GACTCGGCCG  420
421   GTGATCTACC  TGAGCTCAGA  GATCGAACCC  AAACTTCTGG  GAAAACTGAA  GGATATCATT  480
481   AAAAGACACC  AGGGCTCAGT  AACTGATGAT  AAACAGGCCA  GTTCTCATGT  GGTGGTTCCG  540
541   ATTCCCGCCA  GTCTGGAGGA  GGAGGAGTGG  GTCCGACCTG  TGATGAAGAG  AGATAAACAG  600
601   ATGCTGCTGC  ACTGGGGTTA  CTGGCCTGAC  AGTTACGATA  CCTGGATCTC  AGCCAGTGAA  660
661   GTGGAGGCGG  TAGTGGAGGA  TCCACCCAGC  GCAGAGAAAC  CCAGAAAGGT  TCATGCTAAG  720
721   TGGATCCTGG  ATCTGGATCA  GTATAACGAG  TGGATGAATG  AGGAAGACTA  CGAGGTGGGT  780
781   GAAGGAGGCA  CGAGGAGGAA  AAGGATCTCA  GCTAAGACTC  TGACGGATGA  AGTGAGCGCT  840
841   CCAGATGAGA  GGAGAGATAA  AAAACCCGCC  AACGCCAAGA  AACGCAAACG  CTCCCCCTCT  900
901   CCATCCCCGA  CTCCGCCCCC  TCAGGAGAGC  AAGAAGAAGA  ACACCAAGAA  AGGGCCCACT  960
961   ACCCCTTACA  ATAAGTCGAA  GCGAGGTCAG  AGGGAGGAGG  AGCAGGAGGA  CTTGACCAAA  1020
1021  GACCTGGACG  AGCCGTCACC  TGTACCTGCA  GCAGAGGAGT  CCCTCAATAA  AACAGTGACT  1080
1081  AAAAAGGACT  CAGACTCGAC  TCCGGTGAAG  GGGGGGACTG  ATGGAGGTGA  TGCATTTATT  1140
1141  CATGTGAAGG  GAGAACCGGT  GAAAGGTTCT  GATCTGCATG  AGGATAACGT  GACTGAACAG  1200
1201  ACGCACCACA  TCATCATTCC  CAGCTACGCT  GCCTGGTTCG  ACTACAACAG  TGTTCATGCT  1260
1261  ATTGAGCGTA  GAGCTCTGCC  CGAGTTCTTC  AATGGAAAGA  ACAAATCTAA  GACCCCTGAG  1320
1321  ATTTATCTTG  CCTACAGGAA  CTTTATGATA  GATACATATC  GGCTGAACCC  ACAGGAGTAT  1380
1381  TTGACCTCTA  CAGCTTGCCG  TAGAAACCTG  GCAGGAGATG  TTTGTGCCAT  CATGAGGGTC  1440
1441  CATGCATTTC  TGGAACAGTG  GGGTTTGATT  AATTATCAGG  TGGATTCTGA  GAGCCGTCCC  1500
1501  ACCCCCATGG  GGCCACCACC  CACATCTCAC  TTCCACGTCC  TGGCAGACAC  GCCATCCAGT  1560
1561  CTCGTACCCC  TGCAGCCGAA  AGCCTCTCAG  ACGCCGTCCT  CACAGCCGAT  ACTGTCGTTC  1620
1621  CCGGACAAAG  TGAAGGAAAA  AACGACGGAT  CTGCAGAACT  TTGGGCTGAG  GACGGACATG  1680
1681  TACAGCAAGA  AGAGCGGCCC  GTCTAAGGGT  AAAAACGCTG  CCAGTGCAAC  ACGGGAGTGG  1740
1741  ACTGAACAGG  AAACTTTGTT  ACTGTTGGAG  GGTTTGGAGA  TGTATAAGGA  TGACTGGAAC  1800
1801  AAGGTGTCGG  AGCACGTGGG  CAGCCGGACG  CAGGACGAGT  GTATCCTGCA  CTTCCTGCGG  1860
1861  TTGCCCATCG  AGGACCCGTA  CTTGGAGGAG  GGAGCGACGG  CTCTGGGTCC  GCTGGTGTAT  1920
1921  CAGCCCGTCC  CCTTCAGTCA  GGCCGGGAAC  CCGGTCATGA  GCACCGTGGC  CTTCCTGGCT  1980
1981  TCCGTGGTCG  ACCCGCGCGT  GGCCTCGGCT  GCAGCCAAGT  CTGCTCTAGA  GGAGTTCTCC  2040
2041  CGTATGAAGG  AGGAGGTACC  AGCGGCTTTG  GTGGAGGCTC  ACGTGCGGCG  TGTGGAGGAA  2100
2101  GCGGCCCGGG  TGAGCGGCAG  ACCAGATCCA  CTGTACGGCT  TGGAGGGCAG  CGGCATCGCC  2160
2161  GGAACCGGCC  TGGAGGACAG  TGATAAGCCT  GAGGAGAGCA  GTGACGAAAG  CAAGAGCAGT  2220
2221  GACGCTCAGA  ACACAGAGGA  CAAGAGAGAC  AACAGCAAGG  AGAGTAAAGA  TGGAGTGAGT  2280
2281  GAGGAGGAGG  AGAAGCAGGG  TGAGAACGGG  AAGAAAGAAG  AAGAAGGAGG  TAAAGAAGGA  2340
2341  GAGACAGAAC  GAGAAGCAGA  GAAGACAGAC  TCGGACACAG  GTGATGTAGA  GAAGGAGAAA  2400
2401  GAAGGAAAAG  AGGGATCAGA  GGATGGACAA  AGGGAAGGAG  AGAGTGATGG  AGAGAGGAAA  2460
2461  GCGAAGGTGG  AGAGAGATGT  TGGTGAGGGG  AATCTGGCCA  CTGCAGCTGC  CTCTGCGCTC  2520
2521  GCTGCTGCTG  CTGTTAAAGC  CAAGCACCTG  GCTGCGGTGG  AGGAGAGGAA  GATCAAGTCT  2580
2581  CTAGTGGCTC  TGCTGGTGGA  GACTCAGATG  AAGAAGCTGG  AGATCAAACT  GAGGCACTTT  2640
2641  GAGGAGCTGG  AGACCATCAT  GGACCGAGAG  AGAGAGGCGT  TGGAGTATCA  GAGGCAGCAG  2700
2701  CTCCTGGCTG  ATCGTCAGGC  GTTCCACATG  GAGCAGTTGA  AGTATGCGGA  GATGAGAGCG  2760
2761  CGCCAGCAGC  ACTTCCAGCA  GATACAACAC  CAGCACCATA  GCAACCAACC  CGGCAACCAG  2820
2821  CCCGGCAACA  CCCCGCCCAT  CCCCCACCAA  TCGGCTCCTA  ACGTCAACGC  CCCGCCTCCT  2880
2881  GCACCCAGCC  TCACCCCGGC  TGCCGCCAAC  ACCCCCAGTG  AAGCTCCGCC  CACTTCTACA  2940
2941  TCTCATGGCT  CCTCCCCCAA  CAACATACAG  CCTGGAGCCG  TGCACGACTC  CGGCACTGCA  3000
3001  CTAACAGGAG  ATTCCCTTAA  TCCCTCCGGC  CCAGTCACCC  CTGCACAGTG  A  3051

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mea-2346Mesocricetus auratus100.01e-32 141
LLPS-Pes-1988Pelodiscus sinensis97.628e-1584.0
LLPS-Orc-3815Oryctolagus cuniculus96.842e-33 143
LLPS-Pof-0830Poecilia formosa96.237e-38 158
LLPS-Fud-2181Fukomys damarensis95.376e-40 165
LLPS-Otg-1626Otolemur garnettii95.377e-40 164
LLPS-Cap-3416Cavia porcellus95.375e-40 165
LLPS-Xet-2417Xenopus tropicalis95.02e-35 150
LLPS-Anc-0947Anolis carolinensis93.521e-38 160
LLPS-Lac-2608Latimeria chalumnae92.867e-41 168
LLPS-Myl-1231Myotis lucifugus91.32e-28 127
LLPS-Orn-0594Oreochromis niloticus90.090.01392
LLPS-Asm-0222Astyanax mexicanus90.030.01517
LLPS-Xim-1921Xiphophorus maculatus89.130.01389
LLPS-Scm-2517Scophthalmus maximus89.130.01356
LLPS-Dar-0727Danio rerio88.910.01474
LLPS-Scf-1477Scleropages formosus88.620.01414
LLPS-Gaa-2380Gasterosteus aculeatus88.40.01387
LLPS-Gaga-3616Gallus gallus85.292e-30 134
LLPS-Ten-2102Tetraodon nigroviridis83.860.01335
LLPS-Drm-1000Drosophila melanogaster82.615e-26 120
LLPS-Tar-2158Takifugu rubripes82.419e-32 138
LLPS-Cea-4701Cercocebus atys81.989e-31 135
LLPS-Aon-0727Aotus nancymaae81.981e-30 135
LLPS-Sus-2505Sus scrofa81.982e-30 134
LLPS-Mum-0200Mus musculus81.985e-31 136
LLPS-Maf-2868Macaca fascicularis81.988e-31 135
LLPS-Chs-1901Chlorocebus sabaeus81.988e-31 135
LLPS-Caj-0268Callithrix jacchus81.989e-31 135
LLPS-Gog-1649Gorilla gorilla81.989e-31 135
LLPS-Bot-1396Bos taurus81.981e-30 135
LLPS-Mal-0007Mandrillus leucophaeus81.986e-31 135
LLPS-Paa-3218Papio anubis81.989e-31 135
LLPS-Ova-1332Ovis aries81.981e-30 135
LLPS-Mup-2303Mustela putorius furo81.982e-30 134
LLPS-Aim-1251Ailuropoda melanoleuca81.982e-30 134
LLPS-Ran-4721Rattus norvegicus81.988e-31 135
LLPS-Man-2932Macaca nemestrina81.989e-31 135
LLPS-Loa-0086Loxodonta africana81.981e-30 134
LLPS-Urm-1313Ursus maritimus81.981e-30 134
LLPS-Pap-4241Pan paniscus81.988e-31 135
LLPS-Pat-2962Pan troglodytes81.989e-31 135
LLPS-Hos-0717Homo sapiens81.989e-31 135
LLPS-Fec-2956Felis catus81.982e-30 134
LLPS-Rhb-3281Rhinopithecus bieti81.988e-31 135
LLPS-Mam-4040Macaca mulatta81.989e-31 135
LLPS-Caf-1159Canis familiaris81.981e-30 134
LLPS-Nol-3439Nomascus leucogenys81.987e-31 135
LLPS-Sah-0404Sarcophilus harrisii81.082e-30 134
LLPS-Dio-2841Dipodomys ordii81.081e-30 134
LLPS-Cae-1556Caenorhabditis elegans76.812e-24 114
LLPS-Ict-2059Ictidomys tridecemlineatus75.820.01198
LLPS-Eqc-3082Equus caballus75.150.01286
LLPS-Meg-1566Meleagris gallopavo74.232e-120 377
LLPS-Cii-1813Ciona intestinalis74.113e-22 106
LLPS-Orl-3314Oryzias latipes73.912e-26 121
LLPS-Ora-0725Ornithorhynchus anatinus72.01e-1786.3
LLPS-Tag-2412Taeniopygia guttata70.741e-119 382
LLPS-Miv-0013Microbotryum violaceum70.087e-57 213
LLPS-Put-0609Puccinia triticina69.68e-56 211
LLPS-Asc-0470Aspergillus clavatus68.72e-57 216
LLPS-Asn-0228Aspergillus nidulans68.75e-58 217
LLPS-Nef-1368Neosartorya fischeri68.71e-57 216
LLPS-Asfu-0435Aspergillus fumigatus68.71e-57 216
LLPS-Trv-0260Trichoderma virens67.912e-58 218
LLPS-Cym-0096Cyanidioschyzon merolae67.011e-35 150
LLPS-Dos-0497Dothistroma septosporum66.928e-58 216
LLPS-Blg-0673Blumeria graminis66.673e-55 209
LLPS-Scc-1393Schizosaccharomyces cryophilus66.374e-47 182
LLPS-Mod-0081Monodelphis domestica65.650.01058
LLPS-Zyt-0018Zymoseptoria tritici65.442e-57 214
LLPS-Scp-1073Schizosaccharomyces pombe64.757e-48 184
LLPS-Spr-0289Sporisorium reilianum63.512e-57 220
LLPS-Pyt-0678Pyrenophora teres60.342e-58 219
LLPS-Cis-0116Ciona savignyi59.829e-108 346
LLPS-Chc-0052Chondrus crispus59.792e-30 134
LLPS-Scj-0844Schizosaccharomyces japonicus59.593e-48 186
LLPS-Lem-0376Leptosphaeria maculans59.434e-57 215
LLPS-Trr-1166Trichoderma reesei58.963e-60 223
LLPS-Crn-1024Cryptococcus neoformans58.069e-1892.8
LLPS-Fuv-0181Fusarium verticillioides57.81e-59 221
LLPS-Fuo-0283Fusarium oxysporum57.87e-61 225
LLPS-Beb-0561Beauveria bassiana57.549e-60 222
LLPS-Mel-0378Melampsora laricipopulina56.981e-57 213
LLPS-Map-0694Magnaporthe poae56.458e-62 228
LLPS-Phn-0826Phaeosphaeria nodorum56.454e-56 211
LLPS-Gag-0882Gaeumannomyces graminis56.288e-61 225
LLPS-Pug-1198Puccinia graminis56.112e-56 212
LLPS-Gas-1182Galdieria sulphuraria54.842e-36 154
LLPS-Asg-1524Ashbya gossypii54.626e-43 170
LLPS-Kop-0182Komagataella pastoris54.555e-46 180
LLPS-Cog-0565Colletotrichum gloeosporioides54.142e-56 212
LLPS-Nec-0476Neurospora crassa54.119e-61 225
LLPS-Php-2093Physcomitrella patens53.492e-23 110
LLPS-Coo-1215Colletotrichum orbiculare53.167e-58 216
LLPS-Ved-1098Verticillium dahliae52.941e-1482.8
LLPS-Aso-0409Aspergillus oryzae52.153e-58 218
LLPS-Usm-0419Ustilago maydis51.287e-1480.9
LLPS-Mao-0698Magnaporthe oryzae50.942e-58 218
LLPS-Asf-0195Aspergillus flavus50.915e-59 220
LLPS-Pot-2654Populus trichocarpa50.577e-21 102
LLPS-Amt-1280Amborella trichopoda50.566e-22 105
LLPS-Orb-2020Oryza barthii50.544e-1996.3
LLPS-Ori-1346Oryza indica50.541e-1997.8
LLPS-Orni-1618Oryza nivara50.541e-1997.8
LLPS-Orgl-1114Oryza glumaepatula50.541e-1998.2
LLPS-Orp-1362Oryza punctata50.541e-1997.8
LLPS-Orr-2030Oryza rufipogon50.541e-1997.8
LLPS-Orm-0018Oryza meridionalis50.541e-1997.8
LLPS-Org-1461Oryza glaberrima50.542e-1997.4
LLPS-Mae-1765Manihot esculenta50.531e-23 110
LLPS-Viv-1282Vitis vinifera50.523e-22 105
LLPS-Yal-0617Yarrowia lipolytica50.283e-54 204
LLPS-Sol-0652Solanum lycopersicum50.02e-22 106
LLPS-Vir-0431Vigna radiata48.896e-2099.0
LLPS-Phv-0631Phaseolus vulgaris48.893e-2099.4
LLPS-Hov-1252Hordeum vulgare48.426e-21 101
LLPS-Fus-0428Fusarium solani48.423e-1481.6
LLPS-Cogr-0675Colletotrichum graminicola48.46e-57 214
LLPS-Sem-1410Selaginella moellendorffii48.083e-0655.1
LLPS-Tum-0079Tuber melanosporum47.973e-94 320
LLPS-Sac-0249Saccharomyces cerevisiae47.883e-43 171
LLPS-Cus-2175Cucumis sativus47.836e-21 102
LLPS-Tru-1388Triticum urartu47.672e-1688.6
LLPS-Ast-0792Aspergillus terreus47.64e-60 223
LLPS-Orbr-0005Oryza brachyantha47.423e-1996.3
LLPS-Tra-2784Triticum aestivum46.944e-21 102
LLPS-Sei-1656Setaria italica46.888e-1892.0
LLPS-Sob-0182Sorghum bicolor46.886e-1892.4
LLPS-Zem-0448Zea mays46.881e-1791.7
LLPS-Abg-1454Absidia glauca46.064e-70 250
LLPS-Met-1578Medicago truncatula45.986e-1995.9
LLPS-Nia-1212Nicotiana attenuata45.02e-22 107
LLPS-Thc-1312Theobroma cacao44.442e-21 103
LLPS-Prp-1292Prunus persica44.441e-1998.2
LLPS-Lep-1621Leersia perrieri42.71e-1895.9
LLPS-Pytr-0424Pyrenophora triticirepentis42.531e-29 130
LLPS-Dac-2423Daucus carota42.055e-1893.2
LLPS-Art-2283Arabidopsis thaliana41.846e-1995.5
LLPS-Ors-0517Oryza sativa41.574e-1791.3
LLPS-Hea-0404Helianthus annuus41.414e-21 103
LLPS-Coc-1752Corchorus capsularis40.627e-22 105
LLPS-Arl-2875Arabidopsis lyrata38.382e-1688.6
LLPS-Gor-1633Gossypium raimondii34.31e-32 137
LLPS-Brd-1026Brachypodium distachyon33.567e-32 135
LLPS-Mua-1305Musa acuminata32.81e-33 141
LLPS-Via-0994Vigna angularis31.023e-29 127
LLPS-Glm-1108Glycine max30.948e-1995.5
LLPS-Brn-2984Brassica napus30.455e-1996.3
LLPS-Sot-1492Solanum tuberosum29.256e-30 129
LLPS-Brr-1501Brassica rapa29.041e-27 122
LLPS-Bro-1521Brassica oleracea28.761e-27 121