LLPS-Ran-2183
Rnf20

▼ OVERVIEW

Status: Unreviewed
Protein Name: E3 ubiquitin protein ligase
Gene Name: Rnf20
Ensembl Gene: ENSRNOG00000006087.7
Ensembl Protein: ENSRNOP00000056614.2
Organism: Rattus norvegicus
Taxa ID: 10116
LLPS Type: Client


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ CROSS REFERENCE

▼ SEQUENCE

Protein Sequence (FASTA)
1     MSGIGNKRAA  GEPGTSVPPE  KKTAVEDSGT  TVETIKLGGV  SSTEELDIRT  LQSKNRKLAE  60
61    MLDQRQAIED  ELREHIEKLE  RRQATDDASL  LIVNRYWSQF  DENIRIILKR  YDLDQGLGDL  120
121   LTERKALVVP  EPEPDSDSNQ  ERKDDRERGE  GQEPAFSFLA  TLASSSSEEM  ESQLQERVES  180
181   SRRAVSQIVT  VYDKLQEKVD  LLSRKLNSGD  NLIMEEAVQE  LNSFLAQENV  RLQELTDLLQ  240
241   EKHHTMSQEF  CKLQGKVETA  ESRVSVLESM  IDDLQWDIDK  IRKREQRLNR  HLAEVLERVN  300
301   SKGYKVYGAG  SSLYGGTITI  NARKFEEMNA  ELEENKELAQ  NRHCELEKLR  QDFEEVTTQN  360
361   EKLKVELRSA  VEEVVKETPE  YRCMQSQFSV  LYNESLQLKA  HLDEARTLLH  GTRGTHQRQV  420
421   ELIERDEVSL  HKKLRTEVIQ  LEDTLAQVRK  EYEMLRIEFE  QTLAANEQAG  PINREMRHLI  480
481   SSLQNHNHQL  KGEVLRYKRK  LREAQSDLNK  TRLRSGSALL  QSQSSTEDAK  DEPTELKQDS  540
541   EDLATHSSAL  KASQEDEVKS  KRDEEERERE  RREKERERER  EREKEKERER  EKQKLKESEK  600
601   ERDPVKDKDK  GKHDDGRKKE  AEIIKQLKTE  LKKAQESQKE  MKLLLDMYRS  APKEQRDKVQ  660
661   LMAAEKKSKA  ELEDLRQRLK  DLEDKEKKEN  KKMADEDALR  KIRAVEEQIE  YLQKKLAVAK  720
721   QEEEALLSEM  DVTGQAFEDM  QEQNIRLMQQ  LREKDDANFK  LMSERIKSNQ  IHKLLKEEKE  780
781   ELADQVLTLK  TQVDAQLQVV  RKLEEKEHLL  QSNIGTGEKE  LGLRTQALEM  NKRKAMEAAQ  840
841   LADDLKAQLE  LAQKKLHDFQ  DEIVENSVTK  EKDLFNFKRA  QEDISRLRRK  LETTKKPDNV  900
901   PKCDEILMEE  IKDYKARLTC  PCCNMRKKDA  VLTKCFHVFC  FECVKTRYDT  RQRKCPKCNA  960
961   AFGANDFHRI  YIG  973
Nucleotide CDS Sequence (FASTA)
1     ATGTCAGGGA  TTGGAAATAA  AAGAGCGGCT  GGAGAGCCAG  GCACATCTGT  GCCCCCAGAG  60
61    AAGAAGACAG  CTGTCGAAGA  TTCAGGGACC  ACAGTGGAAA  CAATTAAACT  AGGAGGTGTC  120
121   TCTTCAACGG  AGGAATTAGA  CATTCGAACA  CTGCAATCGA  AAAATCGTAA  GCTAGCAGAA  180
181   ATGCTAGATC  AGCGGCAGGC  CATTGAAGAT  GAGCTTCGGG  AGCACATTGA  GAAGCTGGAG  240
241   CGACGCCAGG  CCACCGACGA  TGCCTCACTG  TTGATCGTGA  ACCGGTACTG  GAGCCAGTTT  300
301   GATGAAAACA  TCCGCATCAT  CCTTAAACGT  TATGATCTGG  ACCAGGGTTT  GGGAGACCTA  360
361   CTCACAGAAA  GGAAAGCCTT  GGTTGTGCCA  GAGCCTGAGC  CCGACTCTGA  CAGTAATCAG  420
421   GAGCGCAAAG  ATGACCGTGA  GAGAGGGGAA  GGGCAAGAGC  CAGCTTTCTC  TTTCCTTGCT  480
481   ACTTTGGCTA  GCAGTTCCAG  TGAGGAGATG  GAGTCCCAGC  TTCAGGAGCG  CGTGGAGTCC  540
541   TCCCGCCGTG  CTGTGTCTCA  GATTGTGACC  GTCTATGATA  AATTGCAAGA  AAAAGTGGAT  600
601   CTCTTGTCCC  GGAAACTGAA  CAGTGGAGAT  AACCTGATAA  TGGAGGAAGC  AGTACAGGAG  660
661   CTGAACTCCT  TCCTTGCGCA  AGAGAATGTG  AGGCTCCAGG  AACTGACAGA  TCTCCTTCAG  720
721   GAGAAGCATC  ACACCATGTC  TCAGGAGTTC  TGTAAGCTGC  AGGGTAAAGT  AGAGACAGCA  780
781   GAGTCACGAG  TGTCCGTCTT  GGAGTCCATG  ATTGATGACC  TGCAGTGGGA  TATTGACAAA  840
841   ATTCGAAAAA  GAGAACAGCG  GCTCAACCGG  CATTTGGCTG  AAGTCCTAGA  GCGGGTGAAC  900
901   TCAAAAGGCT  ATAAAGTGTA  CGGAGCAGGG  AGCAGTCTCT  ATGGAGGCAC  AATCACCATC  960
961   AATGCCCGGA  AGTTTGAGGA  AATGAATGCT  GAGCTTGAGG  AGAACAAAGA  GTTGGCTCAG  1020
1021  AACCGACATT  GTGAGCTAGA  GAAACTTCGT  CAAGACTTTG  AAGAGGTCAC  TACACAGAAT  1080
1081  GAAAAGTTGA  AGGTGGAGTT  GCGGAGCGCA  GTGGAGGAAG  TGGTTAAGGA  AACCCCAGAA  1140
1141  TATCGCTGCA  TGCAGTCACA  GTTCTCTGTC  CTGTACAATG  AGAGTCTACA  GTTGAAAGCT  1200
1201  CACTTGGATG  AAGCTCGGAC  CCTGCTTCAT  GGCACCCGGG  GAACTCACCA  GCGCCAGGTT  1260
1261  GAACTCATTG  AGCGAGATGA  GGTTAGTCTG  CATAAGAAGC  TGAGAACTGA  AGTGATTCAG  1320
1321  CTGGAGGATA  CCTTGGCCCA  GGTCCGCAAG  GAGTATGAGA  TGTTGAGGAT  AGAGTTTGAG  1380
1381  CAGACCCTTG  CGGCCAATGA  ACAAGCAGGC  CCCATAAACC  GGGAGATGCG  GCACCTCATT  1440
1441  AGCAGTCTCC  AGAACCATAA  CCACCAGCTG  AAGGGGGAGG  TCCTGAGGTA  TAAGCGGAAA  1500
1501  CTCAGAGAGG  CACAGTCTGA  CCTGAACAAG  ACGCGTCTGC  GCAGTGGCAG  TGCCCTCCTG  1560
1561  CAGTCGCAGT  CTAGTACTGA  GGACGCCAAG  GATGAACCCA  CAGAGCTGAA  GCAAGACTCT  1620
1621  GAGGACCTCG  CCACTCATTC  CTCAGCATTG  AAGGCCTCTC  AGGAGGATGA  AGTGAAGTCT  1680
1681  AAGCGGGATG  AGGAAGAGAG  AGAACGAGAA  AGGAGGGAGA  AAGAAAGAGA  GAGAGAACGA  1740
1741  GAACGGGAAA  AGGAAAAGGA  GAGAGAACGA  GAGAAACAGA  AACTGAAAGA  GTCGGAAAAA  1800
1801  GAGAGAGATC  CTGTTAAGGA  TAAGGACAAA  GGGAAGCACG  ATGACGGGAG  GAAGAAGGAG  1860
1861  GCAGAGATCA  TCAAGCAGCT  GAAGACTGAG  CTCAAGAAAG  CACAAGAGAG  CCAGAAGGAG  1920
1921  ATGAAGCTGC  TCCTGGACAT  GTACCGCTCT  GCCCCCAAGG  AGCAGAGAGA  CAAAGTGCAG  1980
1981  CTAATGGCGG  CCGAGAAGAA  GTCAAAGGCA  GAGTTGGAGG  ATCTCAGGCA  AAGACTCAAG  2040
2041  GATCTGGAAG  ATAAGGAGAA  GAAGGAGAAT  AAGAAAATGG  CTGATGAGGA  CGCCTTGAGG  2100
2101  AAGATCCGGG  CAGTGGAAGA  GCAGATCGAA  TACCTGCAGA  AGAAGCTGGC  TGTGGCCAAG  2160
2161  CAGGAGGAAG  AAGCTCTCCT  GTCTGAGATG  GATGTCACAG  GACAGGCCTT  TGAGGACATG  2220
2221  CAGGAGCAGA  ACATCCGTTT  GATGCAGCAG  TTGCGGGAGA  AGGATGATGC  AAACTTCAAG  2280
2281  CTCATGTCAG  AGCGGATCAA  GTCTAATCAG  ATCCATAAGT  TGCTTAAAGA  GGAAAAGGAA  2340
2341  GAGTTAGCTG  ACCAGGTTTT  GACACTGAAG  ACTCAGGTAG  ATGCCCAGTT  ACAGGTAGTA  2400
2401  AGAAAGCTGG  AAGAGAAGGA  GCACCTGCTT  CAGAGTAACA  TTGGCACAGG  GGAGAAGGAG  2460
2461  CTGGGTCTTA  GGACTCAAGC  CTTAGAGATG  AATAAACGCA  AGGCCATGGA  GGCGGCCCAG  2520
2521  CTTGCAGATG  ACCTCAAAGC  ACAGCTGGAA  CTGGCTCAGA  AGAAGCTCCA  TGATTTTCAG  2580
2581  GATGAAATTG  TGGAGAACAG  TGTCACCAAG  GAAAAGGACT  TGTTCAATTT  CAAACGCGCA  2640
2641  CAGGAAGACA  TCTCTAGGCT  CCGAAGAAAG  CTGGAGACAA  CCAAGAAGCC  AGACAACGTG  2700
2701  CCCAAATGTG  ACGAGATTCT  GATGGAGGAG  ATAAAGGACT  ACAAGGCGCG  GCTGACCTGC  2760
2761  CCTTGCTGTA  ACATGCGTAA  AAAGGATGCA  GTACTTACCA  AGTGTTTTCA  CGTTTTCTGC  2820
2821  TTTGAGTGTG  TGAAGACGCG  CTATGACACT  CGCCAGCGCA  AGTGTCCCAA  GTGTAACGCT  2880
2881  GCTTTCGGTG  CCAATGATTT  CCATCGCATC  TACATTGGCT  GA  2922

▼ ANNOTATION

Disorder
D2P2IUPred2A
Interaction
RAINIIDMIST
Physicochemical
Compute pI/MwAAindex
Localization
COMPARTMENTS

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mum-1641Mus musculus99.180.01650
LLPS-Rhb-2805Rhinopithecus bieti99.150.0 608
LLPS-Orc-2647Oryctolagus cuniculus99.150.0 609
LLPS-Loa-3912Loxodonta africana99.150.0 608
LLPS-Man-2092Macaca nemestrina99.150.0 608
LLPS-Pap-1292Pan paniscus99.150.0 608
LLPS-Pat-2180Pan troglodytes99.150.0 608
LLPS-Hos-3155Homo sapiens99.150.0 608
LLPS-Nol-1086Nomascus leucogenys99.150.0 608
LLPS-Mam-0203Macaca mulatta99.150.0 608
LLPS-Poa-4021Pongo abelii99.150.0 608
LLPS-Gog-2613Gorilla gorilla99.150.0 608
LLPS-Cea-0535Cercocebus atys99.150.0 608
LLPS-Sus-2711Sus scrofa99.150.0 609
LLPS-Chs-3446Chlorocebus sabaeus99.150.0 608
LLPS-Maf-3856Macaca fascicularis99.150.0 608
LLPS-Mal-2271Mandrillus leucophaeus99.150.0 608
LLPS-Paa-3273Papio anubis99.150.0 608
LLPS-Mea-3876Mesocricetus auratus98.920.01060
LLPS-Urm-2353Ursus maritimus98.870.0 608
LLPS-Ict-4123Ictidomys tridecemlineatus98.870.0 608
LLPS-Cas-1548Carlito syrichta98.870.0 609
LLPS-Eqc-1204Equus caballus98.870.0 608
LLPS-Caf-4668Canis familiaris98.870.0 608
LLPS-Caj-1523Callithrix jacchus98.870.0 607
LLPS-Aon-0604Aotus nancymaae98.870.0 607
LLPS-Ova-0868Ovis aries98.870.0 608
LLPS-Mup-4525Mustela putorius furo98.870.0 608
LLPS-Aim-2119Ailuropoda melanoleuca98.870.0 608
LLPS-Bot-4849Bos taurus98.870.0 609
LLPS-Dio-1384Dipodomys ordii98.870.0 609
LLPS-Tut-0421Tursiops truncatus98.870.0 607
LLPS-Myl-1898Myotis lucifugus98.590.0 603
LLPS-Fec-4424Felis catus98.310.0 607
LLPS-Fud-2536Fukomys damarensis98.310.0 606
LLPS-Otg-0346Otolemur garnettii98.020.0 603
LLPS-Mod-1426Monodelphis domestica98.020.0 605
LLPS-Sah-3333Sarcophilus harrisii98.020.0 606
LLPS-Ora-1955Ornithorhynchus anatinus97.180.0 603
LLPS-Pes-2491Pelodiscus sinensis96.330.0 595
LLPS-Fia-1761Ficedula albicollis94.920.0 588
LLPS-Tag-2933Taeniopygia guttata94.920.0 587
LLPS-Anc-2423Anolis carolinensis94.911e-98 337
LLPS-Anp-3271Anas platyrhynchos94.630.0 589
LLPS-Meg-1119Meleagris gallopavo94.630.0 584
LLPS-Gaga-2752Gallus gallus94.630.0 585
LLPS-Xet-1943Xenopus tropicalis81.922e-161 506
LLPS-Lac-2713Latimeria chalumnae80.233e-151 476
LLPS-Pof-0427Poecilia formosa78.595e-151 481
LLPS-Icp-3997Ictalurus punctatus78.591e-152 485
LLPS-Asm-0593Astyanax mexicanus78.596e-157 496
LLPS-Xim-0791Xiphophorus maculatus78.597e-151 481
LLPS-Orl-2063Oryzias latipes78.034e-148 474
LLPS-Ten-1444Tetraodon nigroviridis77.756e-149 475
LLPS-Tar-0740Takifugu rubripes77.752e-149 476
LLPS-Dar-2903Danio rerio77.461e-153 488
LLPS-Orn-1720Oreochromis niloticus77.251e-148 474
LLPS-Scf-0723Scleropages formosus75.921e-139 449
LLPS-Gaa-1578Gasterosteus aculeatus75.432e-133 432
LLPS-Scm-0403Scophthalmus maximus74.791e-135 439
LLPS-Cap-3961Cavia porcellus73.655e-139 448
LLPS-Cii-0300Ciona intestinalis72.631e-28 120
LLPS-Leo-2551Lepisosteus oculatus70.974e-1890.9
LLPS-Drm-1769Drosophila melanogaster55.442e-102 350
LLPS-Cis-0171Ciona savignyi53.41e-93 325
LLPS-Dac-0849Daucus carota50.07e-1583.6
LLPS-Nia-0536Nicotiana attenuata46.972e-1379.3
LLPS-Sob-0639Sorghum bicolor46.974e-1377.8
LLPS-Viv-2131Vitis vinifera46.971e-1379.3
LLPS-Sei-0887Setaria italica46.972e-1379.0
LLPS-Lem-0664Leptosphaeria maculans45.613e-1171.6
LLPS-Ors-0309Oryza sativa45.458e-1377.0
LLPS-Org-0196Oryza glaberrima45.459e-1376.6
LLPS-Orr-0675Oryza rufipogon45.459e-1376.6
LLPS-Orm-1332Oryza meridionalis45.451e-1276.6
LLPS-Orni-2174Oryza nivara45.459e-1376.6
LLPS-Hea-1284Helianthus annuus45.459e-1376.6
LLPS-Ori-0225Oryza indica45.458e-1377.0
LLPS-Orb-1201Oryza barthii45.459e-1376.6
LLPS-Orgl-0930Oryza glumaepatula45.456e-1377.4
LLPS-Crn-0545Cryptococcus neoformans44.442e-1069.3
LLPS-Orbr-0500Oryza brachyantha43.946e-1274.3
LLPS-Lep-0958Leersia perrieri43.941e-1173.6
LLPS-Pytr-1485Pyrenophora triticirepentis41.821e-0966.6
LLPS-Brr-0467Brassica rapa41.183e-1894.7
LLPS-Bro-2701Brassica oleracea41.183e-1894.4
LLPS-Brn-1266Brassica napus41.183e-1894.4
LLPS-Coc-0563Corchorus capsularis40.543e-1688.2
LLPS-Mua-0588Musa acuminata40.06e-0653.5
LLPS-Trr-1343Trichoderma reesei39.621e-0760.1
LLPS-Asg-1357Ashbya gossypii39.391e-1172.8
LLPS-Yal-1325Yarrowia lipolytica39.062e-1068.9
LLPS-Art-2335Arabidopsis thaliana38.784e-1687.8
LLPS-Arl-2148Arabidopsis lyrata38.785e-1687.4
LLPS-Dos-1459Dothistroma septosporum38.465e-1377.4
LLPS-Met-2277Medicago truncatula38.19e-1789.7
LLPS-Amt-2127Amborella trichopoda38.055e-0859.3
LLPS-Usm-0649Ustilago maydis36.975e-1480.9
LLPS-Spr-1179Sporisorium reilianum35.291e-1379.7
LLPS-Nec-0296Neurospora crassa34.296e-0964.3
LLPS-Kop-1360Komagataella pastoris33.871e-0760.1
LLPS-Cae-1645Caenorhabditis elegans33.432e-34 146
LLPS-Phn-0634Phaeosphaeria nodorum33.332e-1069.3
LLPS-Cym-0038Cyanidioschyzon merolae33.331e-1276.3
LLPS-Brd-0524Brachypodium distachyon33.336e-0755.8
LLPS-Phv-2408Phaseolus vulgaris32.091e-1070.1
LLPS-Php-2194Physcomitrella patens31.598e-35 147
LLPS-Sem-1414Selaginella moellendorffii31.065e-32 138
LLPS-Sol-1259Solanum lycopersicum30.688e-29 128
LLPS-Tum-0990Tuber melanosporum30.531e-0759.7
LLPS-Gor-2795Gossypium raimondii29.956e-27 122
LLPS-Cus-1706Cucumis sativus29.954e-24 113
LLPS-Vir-0153Vigna radiata29.663e-25 117
LLPS-Abg-1598Absidia glauca29.61e-21 105
LLPS-Mae-2043Manihot esculenta28.655e-31 135
LLPS-Thc-0824Theobroma cacao28.492e-26 120
LLPS-Prp-0748Prunus persica28.12e-29 130
LLPS-Via-0919Vigna angularis28.079e-23 109
LLPS-Asni-1500Aspergillus niger27.453e-1172.0
LLPS-Tru-1939Triticum urartu27.339e-0963.5
LLPS-Tra-2789Triticum aestivum27.331e-0863.2
LLPS-Pot-2721Populus trichocarpa27.09e-29 128
LLPS-Hov-0832Hordeum vulgare26.791e-22 108
LLPS-Glm-0741Glycine max26.725e-27 122
LLPS-Mel-1429Melampsora laricipopulina26.165e-22 106
LLPS-Miv-1272Microbotryum violaceum26.132e-1791.7
LLPS-Zem-2344Zea mays25.461e-21 105
LLPS-Gas-1343Galdieria sulphuraria24.731e-0863.2
LLPS-Chr-1151Chlamydomonas reinhardtii24.32e-1275.5
LLPS-Pug-0737Puccinia graminis24.232e-1792.0
LLPS-Sac-1021Saccharomyces cerevisiae23.972e-1068.9
LLPS-Chc-1017Chondrus crispus23.557e-0963.9