LLPS-Pes-2491
RNF20
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | E3 ubiquitin protein ligase |
| Gene Name: | RNF20 |
| Ensembl Gene: | ENSPSIG00000011587.1 |
| Ensembl Protein: | ENSPSIP00000013006.1 |
| Organism: | Pelodiscus sinensis |
| Taxa ID: | 13735 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSPSIT00000013069.1 | ENSPSIP00000013006.1 |
| UniProt | K7FY96, K7FY96_PELSI | |
| GeneBank | AGCU01006334 | |
| RefSeq | XM_006111077.2 | XP_006111139.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSGIGNKRAA TEPGPSVPPE KKAGVEDSGT TVETIKLGGV SSTEELDIRT LQTKNRKLAE 60 61 MLDQRQAIED ELREHIEKLE RRQATDDASL LIVNRYWSQF DENIRIILKR YDLEQGLGDL 120 121 LSDRKALVVP EPEPDSDSNQ ERKDERERGE GLEPAFSFLA TLASSTSEEM ESQLQERVES 180 181 SRRAVAQIVT KYDKLQEKMD ILSQKLNSGD PSLVDEAVQE LNSYLAHENG RLHELSDLLQ 240 241 EKHRIMSQEF SKLQEKVEMA ESRVCVLETM IDDLQWDIDK IRKREQRLNR HLADVLERVN 300 301 SKGYKVYGAG SSLYGGTITI NARKFEEMNS ELEENKELAG NRLSELEKLR QDLEEVTTQN 360 361 EKLKMELRRA VEEAVKETPE YRCMQSQFSV LYNESLQLKA HLDEARTLLH GTRNTHQRQV 420 421 ELIERDEVSL HKKLRTEVIQ LEDTLAQVRK EYEMLRIEFE QTLAANEQAG PINREMRHLI 480 481 SSLQNHNHQL KGEVLRYKRK LREAQSDLSK TRSRSGSVLL QSQSSTEEIK EEPPEVKQEP 540 541 DDSSAQASVL KAAPEDAGEA KAKRDEEERE RERREKERER EKEKEKERER EKEKEKERER 600 601 EKQKQKESEK ERESTKDKGK HEDGRKKEAE VIKQLKADLK KAQESQKEMK LLLDMYRSAP 660 661 KEQRDKVQLM AAEKKAKAEL DELRQRVKDL EDKEKKESKK MADEDALRKI RAVEEQIEYL 720 721 QKKLAMAKQE EEALLSEMDV TGQAFEDMQE QNIRLMQQLR EKDDANFKLM SERIKSNQIH 780 781 KLLKEEKEEL ADQVLTLKTQ VDAQLQVVRK LEEKEHLLQS NIGTGEKELG LRTQALEMNK 840 841 RKAMDAAQLA DDLKAQLELA QKKLHDFQDE IVENSVTKEK DMFNFKRAQE DISRLRRKLE 900 901 TTKKPDMVPN CDEILMEEIK DYKARLTCPC CNMRKKDAVL TKCFHVFCFE CVKTRYDTRQ 960 961 RKCPKCNAAF GANDFHRIYI G 981 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCTGGGA TCGGCAACAA GCGGGCGGCA ACAGAGCCTG GCCCCTCTGT GCCCCCCGAG 60 61 AAAAAGGCAG GGGTTGAAGA CTCAGGAACC ACAGTGGAGA CCATTAAGTT AGGCGGTGTT 120 121 TCCTCAACGG AGGAACTGGA CATCCGGACA TTGCAGACCA AGAACCGAAA GCTGGCGGAG 180 181 ATGCTGGACC AGCGGCAGGC CATTGAGGAT GAGCTGCGGG AGCACATTGA GAAGCTGGAG 240 241 CGGCGGCAGG CCACCGATGA TGCCTCTCTG CTGATAGTCA ACCGTTACTG GAGTCAGTTT 300 301 GATGAAAATA TCCGCATCAT TCTTAAGCGC TATGACCTGG AACAAGGTCT TGGAGACCTT 360 361 CTGTCTGACC GAAAAGCCTT GGTGGTACCA GAACCAGAAC CAGACTCGGA CAGCAATCAG 420 421 GAACGTAAGG ATGAGAGGGA GCGAGGGGAA GGTCTGGAGC CAGCATTCTC CTTCTTAGCC 480 481 ACCCTGGCCA GTAGTACCAG TGAGGAGATG GAGTCTCAGC TTCAGGAGCG TGTGGAGTCC 540 541 TCCCGGCGAG CTGTTGCTCA AATTGTGACC AAGTATGACA AGCTTCAGGA GAAGATGGAC 600 601 ATTCTGTCCC AGAAGTTGAA TAGTGGAGAT CCATCACTGG TGGATGAAGC GGTCCAGGAG 660 661 CTAAATTCCT ACCTTGCTCA TGAAAATGGA CGGCTGCATG AACTGTCTGA TTTACTGCAG 720 721 GAAAAGCACC GCATCATGTC TCAAGAGTTC TCCAAGTTGC AGGAGAAAGT GGAGATGGCA 780 781 GAGTCACGGG TGTGTGTGCT GGAGACCATG ATCGATGACC TTCAGTGGGA TATTGACAAG 840 841 ATCCGCAAGA GAGAGCAGAG GCTCAATCGG CATCTGGCAG ACGTGCTGGA ACGGGTAAAT 900 901 TCAAAAGGTT ACAAAGTCTA TGGAGCCGGA AGCAGCCTCT ATGGGGGAAC GATCACCATC 960 961 AATGCTCGTA AGTTTGAGGA AATGAATTCC GAGCTGGAGG AGAACAAGGA GCTGGCTGGG 1020 1021 AACCGCCTCA GTGAGCTGGA AAAATTGCGC CAGGATCTTG AGGAGGTGAC AACACAGAAT 1080 1081 GAGAAACTGA AGATGGAATT GCGGAGGGCA GTGGAAGAGG CTGTGAAAGA GACGCCAGAG 1140 1141 TACCGATGCA TGCAGTCCCA GTTCTCGGTC CTGTATAACG AGAGCCTCCA GCTGAAGGCG 1200 1201 CATCTGGATG AGGCTCGCAC TCTGCTTCAT GGCACGCGCA ACACACACCA GCGCCAGGTG 1260 1261 GAACTCATTG AGCGGGATGA AGTCAGCCTC CACAAGAAGC TGCGCACAGA GGTGATCCAG 1320 1321 CTAGAGGACA CTTTGGCACA GGTCCGCAAG GAGTATGAGA TGCTGAGGAT AGAGTTTGAA 1380 1381 CAGACTCTTG CTGCCAATGA ACAAGCAGGG CCAATAAATC GGGAGATGCG TCATCTCATC 1440 1441 AGCAGCCTCC AGAATCACAA CCACCAGCTG AAGGGGGAAG TGCTGAGGTA CAAGCGCAAG 1500 1501 CTGAGGGAGG CCCAGTCAGA CCTGAGCAAG ACCCGCTCCC GCAGTGGGAG TGTCCTCCTG 1560 1561 CAGTCCCAGT CTAGCACGGA AGAGATCAAG GAGGAACCAC CAGAGGTCAA ACAGGAGCCT 1620 1621 GACGATTCCT CTGCTCAGGC ATCTGTGCTC AAGGCTGCCC CCGAGGATGC TGGGGAAGCC 1680 1681 AAGGCCAAGC GAGATGAAGA GGAGAGGGAG CGTGAGAGAC GGGAGAAGGA GAGGGAGCGG 1740 1741 GAGAAGGAGA AAGAGAAGGA GAGAGAGCGG GAGAAGGAGA AGGAGAAGGA ACGGGAGCGG 1800 1801 GAAAAGCAGA AGCAGAAGGA GTCGGAGAAG GAGAGAGAGT CCACCAAGGA CAAAGGGAAG 1860 1861 CATGAGGATG GGAGGAAGAA AGAGGCAGAA GTGATCAAGC AGCTGAAGGC TGATCTCAAG 1920 1921 AAAGCCCAGG AGAGCCAGAA AGAGATGAAA CTCCTGTTAG ACATGTACCG CTCTGCCCCA 1980 1981 AAGGAGCAGA GAGACAAAGT TCAGCTCATG GCCGCTGAGA AGAAAGCCAA AGCTGAGCTG 2040 2041 GATGAGCTGA GGCAACGGGT GAAGGACCTG GAGGACAAGG AGAAAAAAGA GAGTAAAAAA 2100 2101 ATGGCAGATG AGGATGCCCT ACGCAAGATC CGAGCGGTGG AGGAGCAGAT TGAGTATCTG 2160 2161 CAGAAGAAAC TAGCCATGGC CAAGCAGGAG GAAGAGGCCC TGCTCTCAGA AATGGATGTC 2220 2221 ACCGGACAAG CCTTCGAGGA TATGCAAGAG CAGAACATTC GCCTGATGCA GCAGCTGCGG 2280 2281 GAGAAGGATG ATGCCAACTT CAAGCTGATG TCAGAACGCA TCAAGTCAAA TCAGATCCAT 2340 2341 AAGCTACTGA AGGAGGAGAA GGAGGAGCTG GCAGACCAGG TCCTGACCCT GAAGACACAG 2400 2401 GTGGATGCTC AGTTACAAGT TGTGCGAAAG CTGGAGGAAA AGGAACACCT GCTACAGAGC 2460 2461 AACATTGGCA CTGGAGAGAA AGAGCTAGGC CTCCGAACCC AGGCGCTGGA GATGAACAAA 2520 2521 CGCAAGGCAA TGGATGCAGC CCAGCTTGCA GACGATCTCA AAGCACAATT AGAGCTGGCT 2580 2581 CAGAAGAAGC TACATGACTT TCAGGATGAG ATTGTGGAGA ACAGTGTGAC TAAAGAGAAG 2640 2641 GACATGTTCA ACTTCAAACG GGCTCAGGAG GACATCTCCA GGTTGCGCAG GAAGCTGGAG 2700 2701 ACCACCAAGA AACCTGACAT GGTGCCCAAC TGTGATGAGA TCTTGATGGA GGAAATCAAG 2760 2761 GATTACAAGG CGCGCCTGAC CTGTCCATGC TGCAACATGC GTAAGAAGGA CGCAGTGCTC 2820 2821 ACCAAGTGCT TTCACGTCTT CTGCTTTGAG TGTGTGAAGA CGCGCTACGA CACCCGCCAG 2880 2881 CGCAAGTGCC CCAAGTGTAA CGCTGCCTTT GGTGCAAATG ACTTCCATCG GATCTACATC 2940 2941 GGCTGA 2946 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Anc-2423 | Anolis carolinensis | 97.77 | 2e-101 | 345 |
| LLPS-Ora-1955 | Ornithorhynchus anatinus | 97.52 | 0.0 | 601 |
| LLPS-Fia-1761 | Ficedula albicollis | 97.51 | 0.0 | 593 |
| LLPS-Tag-2933 | Taeniopygia guttata | 97.51 | 0.0 | 593 |
| LLPS-Anp-3271 | Anas platyrhynchos | 97.23 | 0.0 | 595 |
| LLPS-Meg-1119 | Meleagris gallopavo | 97.23 | 0.0 | 590 |
| LLPS-Gaga-2752 | Gallus gallus | 97.23 | 0.0 | 592 |
| LLPS-Aim-2119 | Ailuropoda melanoleuca | 96.97 | 0.0 | 597 |
| LLPS-Mup-4525 | Mustela putorius furo | 96.97 | 0.0 | 598 |
| LLPS-Urm-2353 | Ursus maritimus | 96.97 | 0.0 | 597 |
| LLPS-Eqc-1204 | Equus caballus | 96.97 | 0.0 | 599 |
| LLPS-Caf-4668 | Canis familiaris | 96.97 | 0.0 | 597 |
| LLPS-Gog-2613 | Gorilla gorilla | 96.69 | 0.0 | 596 |
| LLPS-Sus-2711 | Sus scrofa | 96.69 | 0.0 | 597 |
| LLPS-Cea-0535 | Cercocebus atys | 96.69 | 0.0 | 596 |
| LLPS-Chs-3446 | Chlorocebus sabaeus | 96.69 | 0.0 | 596 |
| LLPS-Maf-3856 | Macaca fascicularis | 96.69 | 0.0 | 596 |
| LLPS-Mal-2271 | Mandrillus leucophaeus | 96.69 | 0.0 | 596 |
| LLPS-Paa-3273 | Papio anubis | 96.69 | 0.0 | 596 |
| LLPS-Rhb-2805 | Rhinopithecus bieti | 96.69 | 0.0 | 597 |
| LLPS-Loa-3912 | Loxodonta africana | 96.69 | 0.0 | 596 |
| LLPS-Man-2092 | Macaca nemestrina | 96.69 | 0.0 | 596 |
| LLPS-Hos-3155 | Homo sapiens | 96.69 | 0.0 | 596 |
| LLPS-Pat-2180 | Pan troglodytes | 96.69 | 0.0 | 596 |
| LLPS-Pap-1292 | Pan paniscus | 96.69 | 0.0 | 596 |
| LLPS-Nol-1086 | Nomascus leucogenys | 96.69 | 0.0 | 596 |
| LLPS-Mam-0203 | Macaca mulatta | 96.69 | 0.0 | 596 |
| LLPS-Poa-4021 | Pongo abelii | 96.69 | 0.0 | 596 |
| LLPS-Caj-1523 | Callithrix jacchus | 96.42 | 0.0 | 594 |
| LLPS-Aon-0604 | Aotus nancymaae | 96.42 | 0.0 | 594 |
| LLPS-Mum-1641 | Mus musculus | 96.42 | 0.0 | 594 |
| LLPS-Ova-0868 | Ovis aries | 96.42 | 0.0 | 595 |
| LLPS-Bot-4849 | Bos taurus | 96.42 | 0.0 | 597 |
| LLPS-Tut-0421 | Tursiops truncatus | 96.42 | 0.0 | 595 |
| LLPS-Orc-2647 | Oryctolagus cuniculus | 96.42 | 0.0 | 593 |
| LLPS-Fec-4424 | Felis catus | 96.42 | 0.0 | 596 |
| LLPS-Ict-4123 | Ictidomys tridecemlineatus | 96.42 | 0.0 | 597 |
| LLPS-Ran-2183 | Rattus norvegicus | 96.36 | 0.0 | 580 |
| LLPS-Mea-3876 | Mesocricetus auratus | 96.14 | 0.0 | 594 |
| LLPS-Myl-1898 | Myotis lucifugus | 96.14 | 0.0 | 590 |
| LLPS-Dio-1384 | Dipodomys ordii | 96.14 | 0.0 | 593 |
| LLPS-Otg-0346 | Otolemur garnettii | 96.14 | 0.0 | 595 |
| LLPS-Cas-1548 | Carlito syrichta | 96.14 | 0.0 | 595 |
| LLPS-Fud-2536 | Fukomys damarensis | 95.87 | 0.0 | 595 |
| LLPS-Sah-3333 | Sarcophilus harrisii | 92.35 | 0.0 | 1564 |
| LLPS-Mod-1426 | Monodelphis domestica | 92.25 | 0.0 | 1560 |
| LLPS-Xet-1943 | Xenopus tropicalis | 80.44 | 4e-159 | 500 |
| LLPS-Lac-2713 | Latimeria chalumnae | 79.94 | 4e-145 | 460 |
| LLPS-Asm-0593 | Astyanax mexicanus | 77.93 | 1e-150 | 480 |
| LLPS-Xim-0791 | Xiphophorus maculatus | 77.93 | 2e-146 | 469 |
| LLPS-Pof-0427 | Poecilia formosa | 77.93 | 1e-146 | 469 |
| LLPS-Orl-2063 | Oryzias latipes | 77.72 | 9e-144 | 463 |
| LLPS-Icp-3997 | Ictalurus punctatus | 77.65 | 2e-147 | 471 |
| LLPS-Dar-2903 | Danio rerio | 77.37 | 1e-147 | 472 |
| LLPS-Ten-1444 | Tetraodon nigroviridis | 77.09 | 1e-145 | 466 |
| LLPS-Orn-1720 | Oreochromis niloticus | 76.39 | 8e-143 | 459 |
| LLPS-Tar-0740 | Takifugu rubripes | 76.32 | 2e-144 | 464 |
| LLPS-Gaa-1578 | Gasterosteus aculeatus | 76.01 | 1e-128 | 420 |
| LLPS-Scf-0723 | Scleropages formosus | 75.84 | 1e-135 | 439 |
| LLPS-Scm-0403 | Scophthalmus maximus | 74.72 | 3e-131 | 428 |
| LLPS-Cap-3961 | Cavia porcellus | 73.2 | 1e-135 | 440 |
| LLPS-Cii-0300 | Ciona intestinalis | 72.63 | 2e-28 | 119 |
| LLPS-Leo-2551 | Lepisosteus oculatus | 70.97 | 4e-18 | 90.9 |
| LLPS-Cis-0171 | Ciona savignyi | 62.68 | 8e-87 | 306 |
| LLPS-Drm-1769 | Drosophila melanogaster | 54.55 | 2e-98 | 339 |
| LLPS-Dac-0849 | Daucus carota | 50.0 | 9e-15 | 83.2 |
| LLPS-Tru-1939 | Triticum urartu | 47.76 | 2e-13 | 79.3 |
| LLPS-Tra-2789 | Triticum aestivum | 46.97 | 2e-13 | 79.3 |
| LLPS-Nia-0536 | Nicotiana attenuata | 46.97 | 1e-13 | 79.3 |
| LLPS-Viv-2131 | Vitis vinifera | 46.97 | 1e-13 | 79.7 |
| LLPS-Lem-0664 | Leptosphaeria maculans | 45.61 | 2e-11 | 72.0 |
| LLPS-Orni-2174 | Oryza nivara | 45.45 | 1e-12 | 76.6 |
| LLPS-Hea-1284 | Helianthus annuus | 45.45 | 9e-13 | 76.6 |
| LLPS-Ori-0225 | Oryza indica | 45.45 | 9e-13 | 76.6 |
| LLPS-Orb-1201 | Oryza barthii | 45.45 | 1e-12 | 76.3 |
| LLPS-Orgl-0930 | Oryza glumaepatula | 45.45 | 7e-13 | 77.0 |
| LLPS-Ors-0309 | Oryza sativa | 45.45 | 9e-13 | 76.6 |
| LLPS-Org-0196 | Oryza glaberrima | 45.45 | 1e-12 | 76.6 |
| LLPS-Orr-0675 | Oryza rufipogon | 45.45 | 1e-12 | 76.6 |
| LLPS-Orm-1332 | Oryza meridionalis | 45.45 | 1e-12 | 76.3 |
| LLPS-Crn-0545 | Cryptococcus neoformans | 44.44 | 1e-10 | 69.7 |
| LLPS-Cus-1706 | Cucumis sativus | 43.94 | 8e-13 | 77.0 |
| LLPS-Lep-0958 | Leersia perrieri | 43.94 | 1e-11 | 73.6 |
| LLPS-Orbr-0500 | Oryza brachyantha | 43.94 | 6e-12 | 73.9 |
| LLPS-Pytr-1485 | Pyrenophora triticirepentis | 41.82 | 9e-10 | 67.0 |
| LLPS-Brn-0440 | Brassica napus | 41.18 | 3e-18 | 94.7 |
| LLPS-Brr-0467 | Brassica rapa | 41.18 | 2e-18 | 94.7 |
| LLPS-Bro-2701 | Brassica oleracea | 41.18 | 3e-18 | 94.7 |
| LLPS-Brd-0732 | Brachypodium distachyon | 40.2 | 1e-17 | 92.4 |
| LLPS-Mua-0588 | Musa acuminata | 40.0 | 6e-06 | 53.5 |
| LLPS-Arl-2148 | Arabidopsis lyrata | 40.0 | 7e-16 | 87.0 |
| LLPS-Trr-1343 | Trichoderma reesei | 39.62 | 9e-08 | 60.5 |
| LLPS-Asg-1357 | Ashbya gossypii | 39.39 | 1e-11 | 73.2 |
| LLPS-Phv-2408 | Phaseolus vulgaris | 39.36 | 6e-08 | 60.8 |
| LLPS-Sac-1021 | Saccharomyces cerevisiae | 39.13 | 2e-11 | 72.4 |
| LLPS-Yal-1325 | Yarrowia lipolytica | 39.06 | 2e-10 | 68.9 |
| LLPS-Art-2335 | Arabidopsis thaliana | 38.78 | 5e-16 | 87.4 |
| LLPS-Met-2277 | Medicago truncatula | 38.1 | 8e-17 | 89.7 |
| LLPS-Hov-0832 | Hordeum vulgare | 38.1 | 3e-18 | 94.7 |
| LLPS-Amt-2127 | Amborella trichopoda | 38.05 | 6e-08 | 58.9 |
| LLPS-Tum-0990 | Tuber melanosporum | 37.74 | 2e-07 | 59.3 |
| LLPS-Dos-1459 | Dothistroma septosporum | 37.36 | 3e-12 | 74.7 |
| LLPS-Usm-0649 | Ustilago maydis | 36.0 | 2e-14 | 82.0 |
| LLPS-Cae-1645 | Caenorhabditis elegans | 35.77 | 7e-35 | 147 |
| LLPS-Spr-1179 | Sporisorium reilianum | 35.29 | 8e-14 | 80.1 |
| LLPS-Kop-1360 | Komagataella pastoris | 33.87 | 1e-07 | 60.1 |
| LLPS-Cym-0038 | Cyanidioschyzon merolae | 33.33 | 4e-13 | 77.4 |
| LLPS-Nec-0296 | Neurospora crassa | 33.33 | 2e-08 | 62.8 |
| LLPS-Phn-0634 | Phaeosphaeria nodorum | 33.33 | 2e-10 | 68.9 |
| LLPS-Php-2421 | Physcomitrella patens | 31.71 | 3e-32 | 139 |
| LLPS-Sol-1259 | Solanum lycopersicum | 31.02 | 4e-26 | 119 |
| LLPS-Coc-2126 | Corchorus capsularis | 30.88 | 5e-23 | 110 |
| LLPS-Sem-1414 | Selaginella moellendorffii | 30.52 | 1e-29 | 130 |
| LLPS-Gor-2795 | Gossypium raimondii | 30.49 | 6e-25 | 116 |
| LLPS-Zem-0054 | Zea mays | 29.89 | 9e-18 | 92.8 |
| LLPS-Abg-1598 | Absidia glauca | 29.88 | 1e-21 | 105 |
| LLPS-Vir-0153 | Vigna radiata | 29.66 | 3e-25 | 117 |
| LLPS-Via-0919 | Vigna angularis | 29.18 | 6e-20 | 100 |
| LLPS-Mae-2043 | Manihot esculenta | 28.93 | 6e-28 | 125 |
| LLPS-Prp-1109 | Prunus persica | 28.8 | 8e-24 | 112 |
| LLPS-Thc-0824 | Theobroma cacao | 28.49 | 8e-24 | 112 |
| LLPS-Glm-0741 | Glycine max | 28.12 | 1e-25 | 118 |
| LLPS-Mel-1429 | Melampsora laricipopulina | 27.41 | 5e-20 | 100 |
| LLPS-Pot-1369 | Populus trichocarpa | 27.27 | 3e-29 | 130 |
| LLPS-Chr-1151 | Chlamydomonas reinhardtii | 26.62 | 1e-14 | 83.2 |
| LLPS-Sob-0639 | Sorghum bicolor | 26.49 | 5e-19 | 97.1 |
| LLPS-Miv-1272 | Microbotryum violaceum | 26.13 | 1e-17 | 92.4 |
| LLPS-Asni-1500 | Aspergillus niger | 26.04 | 4e-11 | 71.2 |
| LLPS-Pug-0737 | Puccinia graminis | 24.91 | 1e-16 | 89.0 |
| LLPS-Gas-1343 | Galdieria sulphuraria | 24.73 | 2e-09 | 65.5 |
| LLPS-Chc-1017 | Chondrus crispus | 24.64 | 2e-09 | 65.5 |