• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Pot-2650
POPTR_001G307400

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Protein transport protein SEC23
Gene Name: POPTR_001G307400
Ensembl Gene: POPTR_001G307400v3
Ensembl Protein: PNT57564
Organism: Populus trichocarpa
Taxa ID: 3694
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ FUNCTION

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblPNT57564PNT57564
EnsemblPNT57563PNT57563
EnsemblPNT57565PNT57565
UniProtB9GGU0, B9GGU0_POPTR
GeneBankCM009290PNT57565.1
RefSeqXM_002300172.2XP_002300208.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MSEIPNTDPE  GIDSVRMTWN  NWPRTKVEAS  KCVIPLAASI  SPIRPHSEIP  TLTYPPLRCK  60
61    TCTSIMNCFS  RVDFTAKIWI  CPFCYQRNHF  PPHYSMISET  NLPAELYSQY  TTIEYTLGDK  120
121   NHNPVGEIDA  KSAFVFVLDT  CMIEEEFEYV  KSEVKRAIGL  LPENAMVGFV  SFGTQVQVHE  180
181   LGFSDMSKVY  VFRGTKEISK  DQVMEQLGIG  VAGRRNVPGA  GVGGYQQQKG  MHVQNSGVTR  240
241   FLLPASDCEF  TLNSLLDELQ  TDQWPVAPGT  RASRCTGVAL  SVAAGLLGAC  LPGTGARIVA  300
301   LVGGPCTEGP  GTIISKDLSD  PVRSHKDLDK  DAAPYFKKAV  KFYDSLAKQL  VSQGHVLDLF  360
361   ASALDQVGVA  EMKVAVERTG  GLVVLSESFG  HSVFKDSFKR  VFENGEHSLG  LCFNGTLEIN  420
421   CSKDIKIQGI  IGPCTSMEKK  GPSVADTVIG  EGNTTAWKMC  GLDKSTCLTV  FFDLSSSEKS  480
481   NNPGAMNPQL  YLQFLTSYQN  PEGLMLLRVT  TVTRRWVDSA  ANSEELVQGF  DQETAAVVMA  540
541   RLTSLKMEAE  EGFDATRWLD  RNLIRVCSRF  GEYRKDDPTS  FTLNSFFSFF  PQFLFNLRRS  600
601   QFVQVFNNSP  DETAYFRMLL  NRENITNAAV  MIQPSLISYS  FNSLPQPALL  DVASIGADRI  660
661   LLLDSYFSVV  IFHGMTIAQW  RNLGYQNQPE  HQAFAQLLQA  PKEDAQMIIH  DRFPVPRLVV  720
721   CDQHGSQARF  LLAKLNPSAT  YNNANEMAAG  SDIIFTDDVS  LQVFFEHLQR  LAVQS  775
Nucleotide CDS Sequence (FASTA)
1     ATGTCAGAAA  TCCCAAACAC  AGATCCAGAA  GGCATAGATT  CAGTCCGTAT  GACATGGAAC  60
61    AACTGGCCCA  GAACCAAAGT  CGAAGCATCC  AAATGCGTTA  TCCCTTTAGC  CGCATCAATC  120
121   TCCCCTATAC  GTCCACACTC  AGAAATCCCT  ACTCTCACTT  ACCCTCCTCT  CCGTTGCAAA  180
181   ACCTGCACAT  CCATCATGAA  TTGCTTCTCG  CGTGTCGATT  TCACCGCTAA  GATCTGGATC  240
241   TGTCCTTTCT  GCTACCAACG  CAACCATTTT  CCTCCCCACT  ATTCCATGAT  CTCCGAGACC  300
301   AATCTCCCAG  CTGAGTTGTA  TAGCCAGTAT  ACGACGATAG  AGTATACTTT  AGGTGATAAG  360
361   AATCATAACC  CAGTTGGGGA  AATTGATGCT  AAGTCTGCGT  TTGTGTTTGT  TTTGGATACT  420
421   TGTATGATTG  AGGAAGAATT  TGAGTATGTG  AAATCGGAGG  TTAAGAGGGC  AATTGGGTTG  480
481   TTACCGGAGA  ATGCAATGGT  GGGTTTTGTG  TCTTTTGGGA  CACAAGTGCA  AGTTCATGAA  540
541   TTGGGGTTTA  GTGATATGTC  GAAAGTTTAT  GTTTTTAGAG  GGACTAAAGA  GATTAGTAAA  600
601   GATCAGGTTA  TGGAGCAGTT  AGGTATTGGT  GTTGCTGGCA  GGAGGAATGT  TCCTGGTGCT  660
661   GGTGTTGGTG  GGTATCAGCA  GCAGAAGGGG  ATGCATGTGC  AGAATTCAGG  TGTGACCCGG  720
721   TTTTTATTGC  CGGCATCTGA  CTGTGAATTT  ACGCTCAATT  CGCTCTTGGA  TGAGTTGCAA  780
781   ACGGATCAAT  GGCCGGTGGC  ACCAGGAACT  CGGGCATCAA  GGTGTACTGG  AGTAGCATTG  840
841   AGTGTTGCAG  CTGGATTGCT  TGGAGCTTGT  TTGCCTGGTA  CTGGAGCTAG  AATTGTAGCT  900
901   TTAGTTGGTG  GTCCTTGCAC  TGAAGGGCCA  GGCACGATTA  TATCAAAAGA  CTTGTCTGAT  960
961   CCTGTACGTT  CCCACAAGGA  TCTTGATAAG  GATGCAGCAC  CATATTTTAA  GAAAGCAGTC  1020
1021  AAATTTTATG  ATAGTCTTGC  AAAGCAGCTT  GTCAGTCAGG  GTCATGTTTT  GGACCTTTTT  1080
1081  GCATCTGCTT  TGGATCAGGT  TGGGGTTGCA  GAAATGAAAG  TTGCGGTAGA  AAGAACTGGT  1140
1141  GGTCTTGTTG  TTCTCTCAGA  AAGTTTTGGA  CATTCTGTGT  TTAAGGACTC  CTTCAAGCGC  1200
1201  GTATTTGAAA  ATGGAGAACA  TTCTCTTGGC  CTCTGTTTTA  ATGGAACACT  TGAGATTAAC  1260
1261  TGTTCAAAGG  ACATCAAAAT  TCAGGGGATT  ATTGGACCTT  GCACCTCTAT  GGAGAAGGTT  1320
1321  GAACCATCTA  CAGCCATTGA  TTTTTTGTTT  TCTTTATTTT  GTTTTTGGAT  CTTATGCAGG  1380
1381  CAAAAAATGT  GA  1392

▼ KEYWORD

ID
Family
Complete proteome
Cytoplasm
Cytoplasmic vesicle
Endoplasmic reticulum
ER-Golgi transport
Membrane
Metal-binding
Protein transport
Reference proteome
Transport
Zinc

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
COPII vesicle coat
Cellular Component
Endoplasmic reticulum exit site
Cellular Component
Endoplasmic reticulum membrane
Cellular Component
Golgi membrane
Molecular Function
GTPase activator activity
Molecular Function
Zinc ion binding
Biological Process
COPII-coated vesicle cargo loading
Biological Process
Intracellular protein transport

▼ KEGG


▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mae-1907Manihot esculenta86.080.01327
LLPS-Thc-1840Theobroma cacao85.330.01318
LLPS-Gor-2318Gossypium raimondii85.160.01315
LLPS-Prp-2157Prunus persica84.040.01286
LLPS-Cus-0442Cucumis sativus83.330.01300
LLPS-Viv-1690Vitis vinifera83.250.01260
LLPS-Met-0325Medicago truncatula82.390.01264
LLPS-Glm-2893Glycine max81.420.01256
LLPS-Phv-0448Phaseolus vulgaris80.80.01243
LLPS-Arl-2445Arabidopsis lyrata80.750.01229
LLPS-Coc-0242Corchorus capsularis80.050.01214
LLPS-Brn-2119Brassica napus79.950.01236
LLPS-Brr-2485Brassica rapa79.950.01236
LLPS-Bro-0511Brassica oleracea79.820.01235
LLPS-Vir-0064Vigna radiata79.770.01248
LLPS-Via-1965Vigna angularis79.770.01248
LLPS-Art-0405Arabidopsis thaliana79.420.01235
LLPS-Hea-2309Helianthus annuus77.790.01169
LLPS-Orb-0760Oryza barthii77.784e-0654.7
LLPS-Sot-1021Solanum tuberosum77.620.01198
LLPS-Dac-0902Daucus carota77.450.01185
LLPS-Nia-1424Nicotiana attenuata77.340.01197
LLPS-Sol-0682Solanum lycopersicum77.20.01196
LLPS-Amt-1074Amborella trichopoda74.450.01139
LLPS-Sob-1918Sorghum bicolor73.770.01111
LLPS-Brd-1837Brachypodium distachyon73.70.01126
LLPS-Ori-0503Oryza indica73.610.01123
LLPS-Orgl-1305Oryza glumaepatula73.610.01123
LLPS-Org-0656Oryza glaberrima73.610.01123
LLPS-Lep-0330Leersia perrieri73.590.01131
LLPS-Orni-1531Oryza nivara73.480.01120
LLPS-Orm-1191Oryza meridionalis73.480.01118
LLPS-Sei-1688Setaria italica73.340.01102
LLPS-Zem-0952Zea mays73.280.01104
LLPS-Hov-0443Hordeum vulgare72.980.01115
LLPS-Tra-1231Triticum aestivum72.850.01117
LLPS-Mua-1920Musa acuminata70.120.01057
LLPS-Orr-0018Oryza rufipogon67.730.01049
LLPS-Sem-1791Selaginella moellendorffii64.180.0 974
LLPS-Php-1605Physcomitrella patens63.350.0 957
LLPS-Orp-1250Oryza punctata62.970.0 973
LLPS-Orbr-2166Oryza brachyantha62.550.0 958
LLPS-Ors-0867Oryza sativa61.950.0 955
LLPS-Osl-0469Ostreococcus lucimarinus53.780.0 779
LLPS-Chr-1157Chlamydomonas reinhardtii53.150.0 780
LLPS-Abg-0042Absidia glauca49.420.0 717
LLPS-Ora-1189Ornithorhynchus anatinus48.335e-134 412
LLPS-Blg-1585Blumeria graminis48.190.0 694
LLPS-Gag-0180Gaeumannomyces graminis48.050.0 697
LLPS-Nef-0258Neosartorya fischeri48.00.0 673
LLPS-Asfu-0467Aspergillus fumigatus47.940.0 674
LLPS-Mao-0777Magnaporthe oryzae47.920.0 698
LLPS-Drm-0633Drosophila melanogaster47.90.0 721
LLPS-Asc-0204Aspergillus clavatus47.80.0 669
LLPS-Map-1129Magnaporthe poae47.790.0 692
LLPS-Asf-0137Aspergillus flavus47.610.0 682
LLPS-Aso-0160Aspergillus oryzae47.610.0 682
LLPS-Lem-1377Leptosphaeria maculans47.550.0 691
LLPS-Scs-1051Sclerotinia sclerotiorum47.530.0 691
LLPS-Lac-1974Latimeria chalumnae47.530.0 698
LLPS-Ved-0454Verticillium dahliae47.530.0 691
LLPS-Coo-1346Colletotrichum orbiculare47.460.0 684
LLPS-Asn-1567Aspergillus nidulans47.420.0 677
LLPS-Beb-0530Beauveria bassiana47.420.0 682
LLPS-Spr-0518Sporisorium reilianum47.420.0 707
LLPS-Gas-0982Galdieria sulphuraria47.370.0 691
LLPS-Rhb-2973Rhinopithecus bieti47.340.0 699
LLPS-Pap-3948Pan paniscus47.340.0 701
LLPS-Hos-2178Homo sapiens47.340.0 700
LLPS-Cogr-0347Colletotrichum graminicola47.340.0 690
LLPS-Cap-4047Cavia porcellus47.340.0 699
LLPS-Asni-0312Aspergillus niger47.290.0 684
LLPS-Fuv-0744Fusarium verticillioides47.270.0 685
LLPS-Tar-1498Takifugu rubripes47.270.0 709
LLPS-Fuo-0170Fusarium oxysporum47.270.0 686
LLPS-Fia-2770Ficedula albicollis47.220.0 696
LLPS-Tag-0181Taeniopygia guttata47.220.0 696
LLPS-Pytr-0389Pyrenophora triticirepentis47.220.0 695
LLPS-Gog-0336Gorilla gorilla47.210.0 700
LLPS-Chs-2719Chlorocebus sabaeus47.210.0 700
LLPS-Maf-0238Macaca fascicularis47.210.0 700
LLPS-Cea-2834Cercocebus atys47.210.0 700
LLPS-Aon-2054Aotus nancymaae47.210.0 699
LLPS-Chc-0427Chondrus crispus47.210.0 697
LLPS-Paa-1471Papio anubis47.210.0 700
LLPS-Miv-0260Microbotryum violaceum47.210.0 695
LLPS-Pat-1655Pan troglodytes47.210.0 700
LLPS-Man-0104Macaca nemestrina47.210.0 700
LLPS-Nol-2466Nomascus leucogenys47.210.0 700
LLPS-Mam-1823Macaca mulatta47.210.0 700
LLPS-Cog-0708Colletotrichum gloeosporioides47.20.0 684
LLPS-Trv-1144Trichoderma virens47.160.0 676
LLPS-Mel-0226Melampsora laricipopulina47.150.0 704
LLPS-Anc-2060Anolis carolinensis47.150.0 695
LLPS-Zyt-0552Zymoseptoria tritici47.10.0 682
LLPS-Nec-0214Neurospora crassa47.090.0 681
LLPS-Sus-2055Sus scrofa47.080.0 698
LLPS-Mup-3601Mustela putorius furo47.080.0 698
LLPS-Aim-1319Ailuropoda melanoleuca47.080.0 698
LLPS-Bot-2032Bos taurus47.080.0 698
LLPS-Dio-2314Dipodomys ordii47.080.0 699
LLPS-Pug-1180Puccinia graminis47.080.0 703
LLPS-Fec-1110Felis catus47.080.0 698
LLPS-Urm-0831Ursus maritimus47.080.0 698
LLPS-Cas-2068Carlito syrichta47.080.0 698
LLPS-Ict-3860Ictidomys tridecemlineatus47.080.0 698
LLPS-Usm-0891Ustilago maydis47.040.0 708
LLPS-Ast-0880Aspergillus terreus47.030.0 667
LLPS-Dos-0349Dothistroma septosporum47.030.0 688
LLPS-Caj-2266Callithrix jacchus47.020.0 671
LLPS-Fus-1441Fusarium solani47.010.0 687
LLPS-Pyt-0904Pyrenophora teres46.960.0 693
LLPS-Mod-2165Monodelphis domestica46.960.0 694
LLPS-Anp-1138Anas platyrhynchos46.960.0 695
LLPS-Gaga-2033Gallus gallus46.960.0 694
LLPS-Mum-3101Mus musculus46.950.0 695
LLPS-Ran-2702Rattus norvegicus46.950.0 695
LLPS-Trr-0571Trichoderma reesei46.950.0 682
LLPS-Orc-1320Oryctolagus cuniculus46.950.0 697
LLPS-Loa-1975Loxodonta africana46.950.0 695
LLPS-Ova-0123Ovis aries46.880.0 691
LLPS-Orn-1829Oreochromis niloticus46.880.0 701
LLPS-Xim-2272Xiphophorus maculatus46.840.0 679
LLPS-Fud-2892Fukomys damarensis46.830.0 694
LLPS-Meg-1594Meleagris gallopavo46.810.0 689
LLPS-Leo-3582Lepisosteus oculatus46.760.0 703
LLPS-Asm-0579Astyanax mexicanus46.750.0 704
LLPS-Caf-2075Canis familiaris46.750.0 691
LLPS-Pof-2530Poecilia formosa46.710.0 678
LLPS-Myl-2986Myotis lucifugus46.70.0 692
LLPS-Eqc-4558Equus caballus46.510.0 672
LLPS-Scj-0960Schizosaccharomyces japonicus46.50.0 680
LLPS-Icp-2240Ictalurus punctatus46.490.0 696
LLPS-Tum-1169Tuber melanosporum46.480.0 680
LLPS-Gaa-0762Gasterosteus aculeatus46.480.0 699
LLPS-Pes-1686Pelodiscus sinensis46.370.0 681
LLPS-Crn-0713Cryptococcus neoformans46.250.0 676
LLPS-Ten-1788Tetraodon nigroviridis46.180.0 665
LLPS-Scf-0903Scleropages formosus46.040.0 693
LLPS-Cym-0143Cyanidioschyzon merolae46.020.0 630
LLPS-Dar-2463Danio rerio45.970.0 691
LLPS-Mal-4026Mandrillus leucophaeus45.910.0 656
LLPS-Scp-1052Schizosaccharomyces pombe45.910.0 669
LLPS-Xet-2867Xenopus tropicalis45.850.0 675
LLPS-Poa-3291Pongo abelii45.750.0 668
LLPS-Yal-1564Yarrowia lipolytica45.640.0 663
LLPS-Cii-1917Ciona intestinalis45.630.0 667
LLPS-Scm-2416Scophthalmus maximus45.630.0 664
LLPS-Phn-0901Phaeosphaeria nodorum45.50.0 669
LLPS-Scc-0371Schizosaccharomyces cryophilus45.470.0 662
LLPS-Sah-2139Sarcophilus harrisii45.470.0 662
LLPS-Orl-3517Oryzias latipes45.40.0 661
LLPS-Cis-1020Ciona savignyi44.890.0 658
LLPS-Cae-0674Caenorhabditis elegans44.240.0 643
LLPS-Tru-2010Triticum urartu44.162e-168 508
LLPS-Put-1187Puccinia triticina43.719e-165 496
LLPS-Mea-1361Mesocricetus auratus42.650.0 560
LLPS-Sac-0903Saccharomyces cerevisiae40.980.0 580
LLPS-Asg-1355Ashbya gossypii40.890.0 580
LLPS-Otg-4066Otolemur garnettii40.559e-180 541
LLPS-Kop-1321Komagataella pastoris40.080.0 558