• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Pot-1980
POPTR_014G128400

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Gamma-tubulin complex component
Gene Name: POPTR_014G128400
Ensembl Gene: POPTR_014G128400v3
Ensembl Protein: PNT04510
Organism: Populus trichocarpa
Taxa ID: 3694
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Centrosome/Spindle pole bodyPredicted from orthologs(View)

▼ FUNCTION

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblPNT04510PNT04510
EnsemblPNT04509PNT04509
UniProtB9I9Q8, B9I9Q8_POPTR
GeneBankCM009303PNT04510.1
RefSeqXM_002320303.2XP_002320339.2

▼ SEQUENCE

Protein Sequence (FASTA)
1     MLHELLLSLL  GYTGDLIIDE  REHQNSLGIP  VSDEHRSFKL  APDISFIQPS  DRDLIERIIS  60
61    LGFYYRELDR  FATKSRNLSW  IRSANPNNEL  SNKNVQDKQS  VYRRAIANGI  VEILSVYRSA  120
121   VLHIEQKLLS  ESIPILATIT  QGLNKFFVLL  PPLYELVLEI  ERDDIRGGQL  LNLLHKRCHC  180
181   GVPELQSCIQ  RLLWHGHQVM  YNQLASWVVY  GILQDQHGEF  FIRRQEDRDV  EHGSSNQDMS  240
241   EKLARLSTDD  ASLTDWHLGF  HIFLDMLPEY  VHMRVAESIL  FAGKAIRVLR  NPSPAFQFKD  300
301   PVYNQQIPKG  AQKNQVSTGR  FPFQKESFED  TNLIGEELLP  QSEADKIENM  LRDLKESSEF  360
361   HKRSFECAVD  SIRAIAASHL  WQLVVVRADL  NGHLKALKDY  FLLAKGDFFQ  CFLEESRQMM  420
421   RLPPRQSTAE  ADLMVPFQLA  AIKTIGEEEK  YFSRVSLRMP  SFGSAVKSSQ  VDLPKTGSTS  480
481   ASLSNASSEI  SLDGWDGIAL  EYSVDWPLQL  FFTQEVLSQY  LRVFQYLLRL  KRTQMELEKS  540
541   WASVMHQDHT  DFAKRRNDRL  NCSVSQQRRQ  RFRPMWHVRE  HMAFLIRNLQ  FYIQVDVIES  600
601   QWNVLQAHIR  DSHDFTELVG  FHQEYLSALI  SQSFLDIGSV  SRILDSIMKL  CLQFCWSIEN  660
661   QENNPNTSEL  EHLTEEFNKK  SNSLYTILRS  SRLAGSQRAP  FLRRFLLRLN  FNLFFETTAQ  720
721   GVLNIVRPSP  TLPVFNQQ  738
Nucleotide CDS Sequence (FASTA)
1     ATGTTACACG  AGCTGTTACT  CTCACTCTTA  GGCTACACTG  GAGATCTCAT  TATCGATGAG  60
61    AGAGAACACC  AGAACTCTCT  CGGCATTCCC  GTCTCCGACG  AACACCGCTC  TTTCAAGCTC  120
121   GCTCCTGATA  TCTCCTTCAT  CCAACCCAGC  GACAGGGATC  TTATTGAGAG  GATAATCAGT  180
181   CTAGGGTTTT  ATTATAGAGA  GCTTGATCGA  TTTGCGACAA  AGTCTCGGAA  TCTGAGTTGG  240
241   ATTAGGTCTG  CAAATCCTAA  TAATGAATTG  TCGAACAAGA  ATGTACAGGA  CAAACAGAGT  300
301   GTTTATCGCA  GAGCTATTGC  TAATGGCATT  GTTGAGATTC  TTTCAGTTTA  CAGATCTGCT  360
361   GTTCTCCACA  TTGAACAGAA  GTTACTGTCA  GAGAGCATTC  CTATTTTGGC  TACTATCACA  420
421   CAAGGTCTTA  ACAAGTTTTT  TGTTCTCTTG  CCGCCACTTT  ATGAGCTTGT  TCTTGAGATT  480
481   GAGCGCGATG  ATATTCGCGG  AGGACAACTT  CTAAACCTTT  TGCACAAAAG  ATGTCACTGT  540
541   GGGGTTCCTG  AATTGCAATC  ATGCATTCAA  AGGCTTCTTT  GGCATGGGCA  TCAGGTCATG  600
601   TATAATCAAC  TTGCTTCCTG  GGTGGTTTAT  GGGATTCTTC  AGGATCAGCA  TGGTGAATTT  660
661   TTCATCAGAA  GGCAGGAAGA  TAGGGATGTG  GAGCATGGCT  CATCTAATCA  AGACATGTCA  720
721   GAAAAATTGG  CTCGCTTGTC  AACTGATGAT  GCATCTTTAA  CAGATTGGCA  CTTGGGATTT  780
781   CATATTTTTT  TGGATATGCT  GCCTGAGTAT  GTCCATATGC  GTGTTGCTGA  ATCAATTCTT  840
841   TTTGCTGGAA  AAGCCATCAG  GGTTCTCCGG  AATCCAAGCC  CAGCATTTCA  GTTTAAGGAT  900
901   CCTGTATATA  ATCAGCAGAT  ACCAAAAGGT  GCTCAAAAAA  ATCAAGTATC  AACAGGACGC  960
961   TTCCCCTTTC  AGAAAGAGTC  TTTTGAAGAT  ACAAACTTGA  TTGGAGAAGA  ATTACTTCCA  1020
1021  CAGTCCGAGG  CTGACAAGAT  TGAAAATATG  CTTCGAGACC  TAAAGGAATC  ATCTGAATTT  1080
1081  CACAAAAGAT  CATTTGAATG  TGCTGTCGAC  TCTATTCGTG  CTATCGCAGC  TAGTCATCTT  1140
1141  TGGCAGCTTG  TGGTTGTGCG  TGCTGACTTG  AATGGCCACC  TGAAGGCACT  TAAAGACTAT  1200
1201  TTTCTTTTGG  CGAAAGGAGA  TTTTTTCCAG  TGTTTTCTTG  AGGAAAGTCG  GCAAATGATG  1260
1261  CGTTTGCCTC  CTCGACAATC  AACTGCTGAA  GCTGATCTCA  TGGTCCCATT  CCAGCTGGCT  1320
1321  GCTATAAAGA  CGATTGGTGA  GGAGGAGAAG  TACTTTTCCA  GAGTATCCTT  GCGGATGCCT  1380
1381  TCATTTGGAT  CTGCGGTTAA  ATCCTCCCAA  GTAGATTTAC  CCAAGACTGG  GAGTACAAGT  1440
1441  GCTTCATTAT  CAAATGCTTC  TTCAGAGATT  TCTCTGGATG  GATGGGATGG  TATTGCTCTG  1500
1501  GAATACTCTG  TTGATTGGCC  CCTACAGTTG  TTCTTTACTC  AGGAAGTGTT  GTCTCAGTAC  1560
1561  CTAAGGGTCT  TTCAGTATTT  GCTACGGCTG  AAACGTACGC  AAATGGAATT  GGAGAAATCA  1620
1621  TGGGCTTCTG  TGATGCATCA  AGATCACACA  GATTTTGCCA  AGCGTCGCAA  TGACCGTTTG  1680
1681  AACTGCTCAG  TATCTCAGCA  AAGACGCCAA  CGTTTTAGGC  CAATGTGGCA  TGTTAGAGAG  1740
1741  CACATGGCAT  TCTTGATCAG  AAATCTTCAG  TTCTATATCC  AGGTGGATGT  AATAGAATCC  1800
1801  CAATGGAATG  TTTTGCAAGC  TCATATTCGA  GATTCTCATG  ACTTTACTGA  ACTTGTGGGC  1860
1861  TTCCATCAAG  AGTATTTATC  AGCTTTAATT  TCACAATCGT  TTTTGGACAT  TGGTTCCGTG  1920
1921  TCAAGGATAT  TAGACAGCAT  AATGAAACTT  TGCCTGCAAT  TCTGCTGGAG  CATTGAAAAC  1980
1981  CAAGAAAACA  ATCCAAATAC  ATCTGAACTG  GAGCATTTAA  CGGAGGAATT  TAACAAGAAA  2040
2041  TCAAATTCGT  TATACACTAT  ATTGCGCAGT  AGTAGGCTAG  CAGGGAGCCA  GCGAGCTCCA  2100
2101  TTTCTCAGGC  GTTTTCTTTT  GCGTCTAAAC  TTTAATCTGT  TCTTTGAGAC  AACTGCACAA  2160
2161  GGTGTACTGA  ATATTGTTAG  ACCATCTCCA  ACACTCCCTG  TTTTTAATCA  ACAATAG  2217

▼ KEYWORD

ID
Family
Complete proteome
Cytoplasm
Cytoskeleton
Microtubule
Reference proteome

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Centrosome
Cellular Component
Equatorial microtubule organizing center
Cellular Component
Gamma-tubulin complex
Cellular Component
Microtubule
Cellular Component
Spindle pole
Molecular Function
Gamma-tubulin binding
Biological Process
Cytoplasmic microtubule organization
Biological Process
Meiotic cell cycle
Biological Process
Microtubule nucleation by interphase microtubule organizing center
Biological Process
Mitotic cell cycle
Biological Process
Spindle assembly

▼ KEGG


▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Mae-1591Manihot esculenta86.540.01235
LLPS-Prp-1929Prunus persica84.310.01188
LLPS-Thc-0963Theobroma cacao83.980.01191
LLPS-Viv-2162Vitis vinifera83.810.01166
LLPS-Coc-0992Corchorus capsularis83.470.01184
LLPS-Gor-2487Gossypium raimondii81.980.01158
LLPS-Glm-0439Glycine max80.960.01111
LLPS-Via-1384Vigna angularis80.550.0 668
LLPS-Sot-0612Solanum tuberosum79.693e-161 476
LLPS-Phv-0676Phaseolus vulgaris78.980.01108
LLPS-Met-1250Medicago truncatula77.550.01083
LLPS-Vir-1083Vigna radiata77.140.01067
LLPS-Nia-0972Nicotiana attenuata77.050.0 702
LLPS-Brr-0619Brassica rapa76.270.01011
LLPS-Arl-1202Arabidopsis lyrata76.260.01079
LLPS-Art-1056Arabidopsis thaliana75.980.01076
LLPS-Brn-0492Brassica napus75.920.01077
LLPS-Dac-1055Daucus carota75.640.01038
LLPS-Bro-1151Brassica oleracea75.510.01071
LLPS-Sol-0606Solanum lycopersicum75.270.01052
LLPS-Hea-1240Helianthus annuus73.940.01010
LLPS-Cus-1486Cucumis sativus72.870.0 682
LLPS-Amt-1264Amborella trichopoda71.790.01001
LLPS-Sob-0065Sorghum bicolor70.920.0 986
LLPS-Mua-0902Musa acuminata70.70.01014
LLPS-Ori-0020Oryza indica70.330.0 972
LLPS-Org-0632Oryza glaberrima70.330.0 972
LLPS-Tra-2516Triticum aestivum70.310.0 971
LLPS-Brd-0133Brachypodium distachyon70.260.0 969
LLPS-Sei-1038Setaria italica70.190.0 983
LLPS-Ors-0104Oryza sativa70.190.0 971
LLPS-Zem-0633Zea mays70.180.0 763
LLPS-Hov-1220Hordeum vulgare70.040.0 964
LLPS-Orbr-0755Oryza brachyantha69.510.0 970
LLPS-Orni-0262Oryza nivara66.530.0 901
LLPS-Orb-0608Oryza barthii66.530.0 902
LLPS-Orr-0157Oryza rufipogon66.530.0 901
LLPS-Orgl-1364Oryza glumaepatula66.490.0 898
LLPS-Orp-0582Oryza punctata66.150.0 886
LLPS-Lep-1252Leersia perrieri65.720.0 902
LLPS-Orm-1440Oryza meridionalis63.620.0 875
LLPS-Php-1286Physcomitrella patens57.30.0 756
LLPS-Sem-2401Selaginella moellendorffii56.410.0 747
LLPS-Anc-2077Anolis carolinensis31.275e-72 255
LLPS-Anp-0626Anas platyrhynchos30.455e-80 273
LLPS-Pes-0359Pelodiscus sinensis30.212e-82 281
LLPS-Xim-0494Xiphophorus maculatus29.98e-76 264
LLPS-Caf-0709Canis familiaris29.662e-81 280
LLPS-Tag-0450Taeniopygia guttata29.634e-84 286
LLPS-Gaga-0793Gallus gallus29.571e-83 285
LLPS-Meg-0738Meleagris gallopavo29.573e-84 286
LLPS-Fia-0934Ficedula albicollis29.531e-81 280
LLPS-Dio-0561Dipodomys ordii29.513e-81 278
LLPS-Xet-1395Xenopus tropicalis29.393e-81 279
LLPS-Leo-2388Lepisosteus oculatus29.388e-80 275
LLPS-Fud-0287Fukomys damarensis29.352e-79 274
LLPS-Mod-1575Monodelphis domestica29.266e-80 275
LLPS-Sus-1487Sus scrofa29.236e-81 278
LLPS-Scm-1978Scophthalmus maximus29.224e-76 265
LLPS-Cap-1185Cavia porcellus29.26e-79 272
LLPS-Pof-2013Poecilia formosa29.23e-77 268
LLPS-Dar-0541Danio rerio29.183e-78 271
LLPS-Ran-1235Rattus norvegicus29.065e-81 278
LLPS-Bot-1242Bos taurus29.061e-80 277
LLPS-Myl-1949Myotis lucifugus28.939e-81 277
LLPS-Aim-3361Ailuropoda melanoleuca28.913e-81 278
LLPS-Mal-1936Mandrillus leucophaeus28.914e-81 278
LLPS-Paa-3256Papio anubis28.911e-80 277
LLPS-Caj-0684Callithrix jacchus28.912e-81 279
LLPS-Gog-0849Gorilla gorilla28.911e-80 277
LLPS-Aon-3297Aotus nancymaae28.916e-81 278
LLPS-Cea-3254Cercocebus atys28.914e-81 278
LLPS-Sah-2607Sarcophilus harrisii28.919e-82 280
LLPS-Chs-0699Chlorocebus sabaeus28.917e-81 278
LLPS-Maf-0543Macaca fascicularis28.914e-81 278
LLPS-Mea-3102Mesocricetus auratus28.913e-82 281
LLPS-Nol-2176Nomascus leucogenys28.915e-81 278
LLPS-Ict-0457Ictidomys tridecemlineatus28.912e-81 279
LLPS-Mam-3674Macaca mulatta28.914e-81 278
LLPS-Poa-1679Pongo abelii28.914e-81 278
LLPS-Rhb-0833Rhinopithecus bieti28.916e-81 278
LLPS-Loa-1847Loxodonta africana28.913e-79 273
LLPS-Man-2354Macaca nemestrina28.914e-81 278
LLPS-Fec-0948Felis catus28.917e-81 278
LLPS-Hos-0470Homo sapiens28.911e-80 277
LLPS-Pap-2134Pan paniscus28.911e-80 277
LLPS-Pat-1056Pan troglodytes28.912e-80 276
LLPS-Ten-1157Tetraodon nigroviridis28.877e-74 259
LLPS-Gaa-3005Gasterosteus aculeatus28.822e-74 260
LLPS-Ova-2292Ovis aries28.763e-80 276
LLPS-Mup-1865Mustela putorius furo28.761e-80 277
LLPS-Mum-2551Mus musculus28.763e-79 273
LLPS-Cas-0021Carlito syrichta28.761e-80 277
LLPS-Eqc-1307Equus caballus28.761e-80 277
LLPS-Orc-1716Oryctolagus cuniculus28.764e-80 276
LLPS-Otg-0156Otolemur garnettii28.767e-81 278
LLPS-Orn-0012Oreochromis niloticus28.631e-74 261
LLPS-Scf-3663Scleropages formosus28.619e-77 266
LLPS-Chr-0197Chlamydomonas reinhardtii28.533e-72 256
LLPS-Orl-0742Oryzias latipes28.476e-73 256
LLPS-Tar-2584Takifugu rubripes28.386e-75 261
LLPS-Icp-0646Ictalurus punctatus28.321e-75 263
LLPS-Asm-0648Astyanax mexicanus27.971e-71 252
LLPS-Cis-1008Ciona savignyi27.932e-60 221
LLPS-Tut-0069Tursiops truncatus27.887e-74 258
LLPS-Ora-0944Ornithorhynchus anatinus27.662e-62 227
LLPS-Lac-2295Latimeria chalumnae27.414e-69 245
LLPS-Osl-0644Ostreococcus lucimarinus27.356e-65 233
LLPS-Cii-0374Ciona intestinalis27.156e-63 228
LLPS-Mel-0513Melampsora laricipopulina26.741e-1894.4
LLPS-Trv-0038Trichoderma virens24.94e-23 109
LLPS-Spr-0537Sporisorium reilianum24.643e-24 113
LLPS-Miv-0881Microbotryum violaceum24.533e-1997.1
LLPS-Coo-0099Colletotrichum orbiculare24.486e-22 105
LLPS-Scs-0521Sclerotinia sclerotiorum24.484e-24 112
LLPS-Cogr-0478Colletotrichum graminicola24.482e-21 104
LLPS-Cog-0471Colletotrichum gloeosporioides24.483e-21 103
LLPS-Usm-0595Ustilago maydis24.391e-24 114
LLPS-Fuv-0727Fusarium verticillioides24.322e-21 103
LLPS-Fuo-0169Fusarium oxysporum24.127e-21 101
LLPS-Nec-0147Neurospora crassa24.022e-22 107
LLPS-Trr-0381Trichoderma reesei24.023e-21 103
LLPS-Fus-0953Fusarium solani23.812e-21 104
LLPS-Drm-0393Drosophila melanogaster23.713e-36 149
LLPS-Gas-0384Galdieria sulphuraria23.72e-34 143
LLPS-Gag-0462Gaeumannomyces graminis23.76e-21 102
LLPS-Blg-0418Blumeria graminis23.684e-1996.7
LLPS-Asfu-0119Aspergillus fumigatus23.331e-20 101
LLPS-Pug-0208Puccinia graminis23.194e-27 122
LLPS-Mao-0279Magnaporthe oryzae23.142e-1997.8
LLPS-Tru-0468Triticum urartu22.914e-21 102
LLPS-Abg-0209Absidia glauca22.83e-1996.7
LLPS-Asni-0469Aspergillus niger22.782e-1997.8
LLPS-Beb-0323Beauveria bassiana22.661e-20 101
LLPS-Urm-0061Ursus maritimus22.241e-1998.6