• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Orni-1554

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Tubulin beta chain
Ensembl Gene: ONIVA06G14810
Ensembl Protein: ONIVA06G14810.1
Organism: Oryza nivara
Taxa ID: 4536
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Centrosome/Spindle pole bodyPredicted from orthologs(View)

▼ FUNCTION

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblONIVA06G14810.1ONIVA06G14810.1
UniProtA0A0E0HPW1, A0A0E0HPW1_ORYNI

▼ SEQUENCE

Protein Sequence (FASTA)
1     MREILHIQGG  QCGNQIGAKF  WEVVCDEHGI  DPTGRYTGNS  DLQLERVNVY  YNEASCGRFV  60
61    PRAVLMDLEP  GTMDSVRTGP  YGQIFRPDNF  VFGQSGAGNN  WAKGHYTEGA  ELIDSVLDVV  120
121   RKEAENCDCL  QGFQVCHSLG  GGTGSGMGTL  LISKIREEYP  DRMMLTFSVF  PSPKVSDTVV  180
181   EPYNATLSVH  QLVENADECM  VLDNEALYDI  CFRTLKLTTP  SFGDLNHLIS  ATMSGVTCCL  240
241   RFPGQLNSDL  RKLAVNLIPF  PRLHFFMVGF  APLTSRGSQQ  YRALTVPELT  QQMWDAKNMM  300
301   CAADPRHGRY  LTASAMFRGK  MSTKEVDEQM  INVQNKNSSY  FVEWIPNNVK  SSVCDIPPRG  360
361   LSMASTFIGN  STSIQEMFRR  VSEQFTAMFR  RKAFLHWYTG  EGMDEMEFTE  AESNMNDLVS  420
421   EYQQYQDATA  DEEGEYEDEE  QQEADDM  447
Nucleotide CDS Sequence (FASTA)
1     ATGAGAGAGA  TCCTGCACAT  CCAAGGCGGG  CAATGTGGCA  ACCAGATCGG  TGCCAAATTC  60
61    TGGGAGGTGG  TGTGTGATGA  GCATGGTATT  GACCCTACTG  GGCGGTACAC  AGGCAACTCA  120
121   GATCTGCAGT  TGGAGCGTGT  CAATGTGTAC  TACAATGAGG  CCTCCTGCGG  TCGCTTTGTG  180
181   CCTCGTGCTG  TTCTCATGGA  CCTTGAGCCT  GGTACTATGG  ACAGTGTCCG  CACTGGACCC  240
241   TATGGCCAGA  TCTTCCGCCC  TGACAACTTT  GTCTTCGGGC  AATCTGGTGC  TGGTAACAAC  300
301   TGGGCCAAGG  GACACTACAC  TGAGGGTGCC  GAGCTAATTG  ATTCTGTTTT  AGATGTTGTG  360
361   AGGAAGGAGG  CTGAGAACTG  TGACTGCCTG  CAAGGATTCC  AAGTATGCCA  CTCTCTTGGT  420
421   GGTGGTACTG  GATCTGGTAT  GGGTACACTG  TTGATATCAA  AGATCAGGGA  GGAGTACCCT  480
481   GACCGCATGA  TGCTGACATT  CTCAGTTTTC  CCCTCACCAA  AAGTATCTGA  TACTGTGGTT  540
541   GAGCCATACA  ATGCTACACT  CTCAGTCCAT  CAGTTGGTTG  AGAATGCTGA  TGAGTGTATG  600
601   GTTCTTGATA  ATGAGGCTCT  CTACGACATT  TGCTTCAGGA  CTCTCAAGCT  GACCACACCT  660
661   AGCTTTGGGG  ATTTGAACCA  TTTGATTTCT  GCCACCATGA  GTGGAGTCAC  ATGCTGCCTA  720
721   AGGTTCCCTG  GTCAGTTGAA  CTCTGACCTC  CGTAAGCTGG  CAGTGAACCT  TATCCCCTTT  780
781   CCCCGTCTCC  ACTTCTTCAT  GGTCGGATTC  GCCCCGCTGA  CATCACGTGG  CTCCCAGCAG  840
841   TACCGTGCCC  TTACTGTTCC  TGAGCTCACA  CAGCAGATGT  GGGATGCCAA  GAACATGATG  900
901   TGCGCTGCTG  ATCCTCGCCA  TGGCCGTTAC  CTCACCGCCT  CTGCCATGTT  CCGTGGAAAG  960
961   ATGAGCACCA  AGGAGGTTGA  TGAGCAGATG  ATCAATGTCC  AGAACAAGAA  CTCATCCTAC  1020
1021  TTCGTCGAGT  GGATCCCCAA  CAATGTGAAG  TCCAGTGTCT  GTGACATTCC  ACCGAGAGGC  1080
1081  CTCTCCATGG  CATCGACCTT  CATTGGCAAC  TCAACATCCA  TCCAGGAGAT  GTTCCGGAGG  1140
1141  GTGAGCGAGC  AGTTCACTGC  TATGTTCAGG  AGGAAGGCTT  TCTTGCACTG  GTACACTGGC  1200
1201  GAAGGCATGG  ACGAGATGGA  GTTCACCGAG  GCAGAGAGCA  ACATGAACGA  CCTTGTCTCT  1260
1261  GAGTACCAGC  AGTACCAGGA  TGCCACCGCC  GATGAGGAGG  GCGAGTACGA  GGACGAGGAG  1320
1321  CAGCAGGAGG  CTGACGACAT  GTAA  1344

▼ KEYWORD

ID
Family
Coiled coil
Complete proteome
Cytoplasm
Cytoskeleton
GTP-binding
Microtubule
Nucleotide-binding
Reference proteome

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Cytoplasm
Cellular Component
Microtubule
Molecular Function
GTP binding
Molecular Function
GTPase activity
Molecular Function
Structural constituent of cytoskeleton
Biological Process
Microtubule-based process

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Ori-0053Oryza indica100.00.0 866
LLPS-Orb-1767Oryza barthii100.00.0 866
LLPS-Orgl-1988Oryza glumaepatula100.00.0 866
LLPS-Orp-2237Oryza punctata100.00.0 866
LLPS-Ors-0360Oryza sativa100.00.0 866
LLPS-Zem-1141Zea mays100.00.0 870
LLPS-Org-0242Oryza glaberrima100.00.0 866
LLPS-Orr-1146Oryza rufipogon100.00.0 866
LLPS-Orm-1694Oryza meridionalis100.00.0 866
LLPS-Lep-1180Leersia perrieri99.770.0 863
LLPS-Orbr-1904Oryza brachyantha99.770.0 865
LLPS-Sob-2178Sorghum bicolor99.770.0 864
LLPS-Viv-1885Vitis vinifera99.530.0 864
LLPS-Brd-1025Brachypodium distachyon99.30.0 862
LLPS-Nia-1328Nicotiana attenuata99.30.0 861
LLPS-Glm-2674Glycine max98.830.0 858
LLPS-Brn-0561Brassica napus98.590.0 858
LLPS-Hov-1115Hordeum vulgare98.590.0 856
LLPS-Brr-1083Brassica rapa98.590.0 858
LLPS-Bro-2380Brassica oleracea98.590.0 859
LLPS-Arl-2717Arabidopsis lyrata98.360.0 857
LLPS-Art-2998Arabidopsis thaliana98.360.0 857
LLPS-Amt-0722Amborella trichopoda98.120.0 850
LLPS-Sei-0201Setaria italica97.890.0 856
LLPS-Met-2573Medicago truncatula97.890.0 850
LLPS-Via-1479Vigna angularis97.890.0 849
LLPS-Phv-2480Phaseolus vulgaris97.890.0 849
LLPS-Tra-1812Triticum aestivum97.650.0 848
LLPS-Mae-2595Manihot esculenta97.650.0 848
LLPS-Tru-0441Triticum urartu97.650.0 848
LLPS-Mua-1705Musa acuminata97.420.0 847
LLPS-Hea-2387Helianthus annuus97.420.0 846
LLPS-Thc-0170Theobroma cacao97.180.0 847
LLPS-Sol-0749Solanum lycopersicum97.180.0 845
LLPS-Coc-0298Corchorus capsularis97.180.0 846
LLPS-Sot-0168Solanum tuberosum96.950.0 843
LLPS-Cus-2392Cucumis sativus96.710.0 843
LLPS-Pot-1525Populus trichocarpa96.710.0 841
LLPS-Gor-1826Gossypium raimondii96.710.0 842
LLPS-Prp-0745Prunus persica96.240.0 838
LLPS-Php-1465Physcomitrella patens95.070.0 834
LLPS-Sem-0031Selaginella moellendorffii94.840.0 835
LLPS-Chr-0860Chlamydomonas reinhardtii93.190.0 825
LLPS-Leo-2361Lepisosteus oculatus87.790.0 781
LLPS-Anc-1529Anolis carolinensis87.790.0 779
LLPS-Cis-0796Ciona savignyi87.560.0 780
LLPS-Cii-2095Ciona intestinalis87.560.0 780
LLPS-Scm-2004Scophthalmus maximus87.560.0 780
LLPS-Icp-1398Ictalurus punctatus87.320.0 778
LLPS-Caj-2185Callithrix jacchus87.320.0 777
LLPS-Fud-3138Fukomys damarensis87.320.0 777
LLPS-Asm-3759Astyanax mexicanus87.320.0 779
LLPS-Sah-3322Sarcophilus harrisii87.320.0 777
LLPS-Chs-0448Chlorocebus sabaeus87.320.0 777
LLPS-Mea-3878Mesocricetus auratus87.320.0 777
LLPS-Mum-1755Mus musculus87.320.0 777
LLPS-Bot-4278Bos taurus87.320.0 777
LLPS-Scf-0653Scleropages formosus87.320.0 777
LLPS-Gaa-1344Gasterosteus aculeatus87.320.0 778
LLPS-Xim-1769Xiphophorus maculatus87.320.0 778
LLPS-Orn-2508Oreochromis niloticus87.320.0 778
LLPS-Man-4381Macaca nemestrina87.320.0 777
LLPS-Lac-4047Latimeria chalumnae87.320.0 777
LLPS-Fec-0114Felis catus87.320.0 777
LLPS-Mod-3852Monodelphis domestica87.320.0 777
LLPS-Pof-0256Poecilia formosa87.320.0 778
LLPS-Hos-2792Homo sapiens87.320.0 777
LLPS-Dar-2929Danio rerio87.320.0 778
LLPS-Ict-2948Ictidomys tridecemlineatus87.320.0 777
LLPS-Xet-1448Xenopus tropicalis87.320.0 778
LLPS-Gaga-0553Gallus gallus87.320.0 777
LLPS-Mam-0567Macaca mulatta87.320.0 777
LLPS-Cap-3489Cavia porcellus87.320.0 777
LLPS-Caf-3592Canis familiaris87.320.0 777
LLPS-Maf-3352Macaca fascicularis87.090.0 775
LLPS-Gog-0740Gorilla gorilla86.850.0 773
LLPS-Aon-0745Aotus nancymaae86.850.0 773
LLPS-Cea-2760Cercocebus atys86.850.0 773
LLPS-Ova-2492Ovis aries86.850.0 773
LLPS-Mal-0435Mandrillus leucophaeus86.850.0 773
LLPS-Ran-0387Rattus norvegicus86.850.0 773
LLPS-Dio-3081Dipodomys ordii86.850.0 773
LLPS-Rhb-2745Rhinopithecus bieti86.850.0 773
LLPS-Urm-3705Ursus maritimus86.850.0 773
LLPS-Pat-3341Pan troglodytes86.850.0 773
LLPS-Nol-3585Nomascus leucogenys86.850.0 773
LLPS-Cas-0144Carlito syrichta86.850.0 773
LLPS-Ten-0400Tetraodon nigroviridis86.850.0 771
LLPS-Poa-2450Pongo abelii86.850.0 773
LLPS-Cae-1271Caenorhabditis elegans86.620.0 774
LLPS-Sus-1819Sus scrofa86.620.0 770
LLPS-Orl-3812Oryzias latipes86.620.0 771
LLPS-Ora-3257Ornithorhynchus anatinus86.620.0 775
LLPS-Myl-2541Myotis lucifugus86.620.0 770
LLPS-Aim-3912Ailuropoda melanoleuca86.620.0 774
LLPS-Mup-4432Mustela putorius furo86.620.0 774
LLPS-Paa-4095Papio anubis86.620.0 774
LLPS-Tut-2274Tursiops truncatus86.620.0 774
LLPS-Fia-0318Ficedula albicollis86.620.0 774
LLPS-Orc-0320Oryctolagus cuniculus86.620.0 774
LLPS-Pes-0306Pelodiscus sinensis86.620.0 775
LLPS-Otg-1654Otolemur garnettii86.620.0 770
LLPS-Pap-1145Pan paniscus86.620.0 770
LLPS-Tar-2601Takifugu rubripes86.380.0 773
LLPS-Tag-2634Taeniopygia guttata86.380.0 773