LLPS-Orn-0007
HMGB1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | HMGB1 |
| Ensembl Gene: | ENSONIG00000012706.1 |
| Ensembl Protein: | ENSONIP00000015992.1 |
| Organism: | Oreochromis niloticus |
| Taxa ID: | 8128 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nuclear speckle, Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSONIT00000016007.1 | ENSONIP00000015992.1 |
| UniProt | I3K4E7, I3K4E7_ORENI | |
| GeneBank | AERX01050072 | |
| RefSeq | XM_019363730.1 | XP_019219275.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGKDPTKPRG KMSSYAYFVQ TCREEHKKKH PEASVNFAEF SKKCSERWKT MSAKEKGKFE 60 61 DMARQDKARY EREMMNYVPA RGGKKKKKYK DPNAPKRPPS AFFIFCSEFR PKVKGESPGL 120 121 SIGDVAKRLG EMWNSTAAED KQPYEKKAAK LKEKYEKDIA AYRAKGKPGS GAPAKAPAKA 180 181 EKKDDDDDDD DEDEEEEEDD DDEDDD 206 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGGAAGG ATCCAACCAA GCCGAGGGGG AAGATGTCCT CCTATGCATA TTTTGTGCAG 60 61 ACCTGTCGGG AGGAGCACAA GAAGAAACAC CCTGAGGCTT CGGTTAACTT TGCCGAGTTT 120 121 TCCAAGAAGT GCTCCGAGCG ATGGAAGACA ATGTCGGCCA AGGAGAAGGG TAAATTTGAG 180 181 GACATGGCCA GGCAGGACAA GGCGCGCTAT GAAAGGGAGA TGATGAACTA CGTTCCAGCG 240 241 AGGGGGGGAA AGAAGAAGAA GAAGTACAAG GACCCCAATG CCCCCAAGAG ACCTCCATCT 300 301 GCCTTCTTCA TCTTCTGCTC AGAGTTCCGC CCTAAGGTGA AAGGCGAGAG CCCCGGCCTG 360 361 TCAATCGGGG ATGTCGCCAA GAGGCTGGGC GAGATGTGGA ACAGCACCGC AGCCGAGGAC 420 421 AAGCAGCCCT ACGAGAAGAA GGCGGCCAAA CTGAAGGAGA AGTACGAGAA GGACATCGCG 480 481 GCGTATCGCG CAAAGGGCAA ACCAGGCAGC GGTGCGCCAG CGAAAGCCCC GGCCAAGGCA 540 541 GAGAAGAAAG ACGATGATGA TGACGACGAC GACGAAGACG AGGAGGAGGA AGAGGATGAT 600 601 GACGATGAGG ATGATGATTA G 621 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Scm-2607 | Scophthalmus maximus | 91.41 | 1e-88 | 267 |
| LLPS-Scf-0387 | Scleropages formosus | 88.96 | 1e-84 | 256 |
| LLPS-Asm-1280 | Astyanax mexicanus | 88.34 | 4e-84 | 255 |
| LLPS-Icp-3145 | Ictalurus punctatus | 88.34 | 6e-84 | 254 |
| LLPS-Leo-0511 | Lepisosteus oculatus | 87.2 | 2e-82 | 251 |
| LLPS-Tar-1762 | Takifugu rubripes | 85.99 | 2e-79 | 243 |
| LLPS-Otg-3410 | Otolemur garnettii | 85.98 | 2e-81 | 248 |
| LLPS-Fia-0559 | Ficedula albicollis | 85.98 | 3e-81 | 248 |
| LLPS-Pat-4075 | Pan troglodytes | 85.98 | 2e-81 | 248 |
| LLPS-Urm-1362 | Ursus maritimus | 85.98 | 2e-81 | 248 |
| LLPS-Pap-3455 | Pan paniscus | 85.98 | 2e-81 | 248 |
| LLPS-Hos-3185 | Homo sapiens | 85.98 | 2e-81 | 248 |
| LLPS-Fec-3527 | Felis catus | 85.98 | 2e-81 | 248 |
| LLPS-Man-4281 | Macaca nemestrina | 85.98 | 2e-81 | 248 |
| LLPS-Loa-3655 | Loxodonta africana | 85.98 | 2e-81 | 248 |
| LLPS-Gaga-3577 | Gallus gallus | 85.98 | 2e-81 | 248 |
| LLPS-Cas-3435 | Carlito syrichta | 85.98 | 2e-81 | 248 |
| LLPS-Nol-4514 | Nomascus leucogenys | 85.98 | 2e-81 | 248 |
| LLPS-Poa-2796 | Pongo abelii | 85.98 | 2e-81 | 248 |
| LLPS-Caf-2446 | Canis familiaris | 85.98 | 2e-81 | 248 |
| LLPS-Eqc-0792 | Equus caballus | 85.98 | 2e-81 | 248 |
| LLPS-Cap-0910 | Cavia porcellus | 85.98 | 2e-81 | 248 |
| LLPS-Gog-2844 | Gorilla gorilla | 85.98 | 2e-81 | 248 |
| LLPS-Caj-4104 | Callithrix jacchus | 85.98 | 2e-81 | 248 |
| LLPS-Mum-0353 | Mus musculus | 85.98 | 2e-81 | 248 |
| LLPS-Chs-3987 | Chlorocebus sabaeus | 85.98 | 2e-81 | 248 |
| LLPS-Cea-4424 | Cercocebus atys | 85.98 | 2e-81 | 248 |
| LLPS-Aon-0308 | Aotus nancymaae | 85.98 | 2e-81 | 248 |
| LLPS-Sus-2329 | Sus scrofa | 85.98 | 2e-81 | 248 |
| LLPS-Paa-2955 | Papio anubis | 85.98 | 2e-81 | 248 |
| LLPS-Mal-3772 | Mandrillus leucophaeus | 85.98 | 2e-81 | 248 |
| LLPS-Myl-3223 | Myotis lucifugus | 85.98 | 2e-81 | 248 |
| LLPS-Dio-3445 | Dipodomys ordii | 85.98 | 2e-81 | 248 |
| LLPS-Bot-4046 | Bos taurus | 85.98 | 2e-81 | 248 |
| LLPS-Pes-1669 | Pelodiscus sinensis | 85.37 | 5e-81 | 247 |
| LLPS-Rhb-2298 | Rhinopithecus bieti | 85.37 | 5e-80 | 245 |
| LLPS-Mod-3325 | Monodelphis domestica | 85.37 | 2e-81 | 247 |
| LLPS-Ict-4072 | Ictidomys tridecemlineatus | 85.37 | 4e-79 | 241 |
| LLPS-Mam-4618 | Macaca mulatta | 85.37 | 6e-81 | 247 |
| LLPS-Sah-1205 | Sarcophilus harrisii | 85.37 | 1e-80 | 246 |
| LLPS-Ran-1068 | Rattus norvegicus | 85.37 | 2e-80 | 246 |
| LLPS-Aim-3443 | Ailuropoda melanoleuca | 85.37 | 2e-80 | 246 |
| LLPS-Dar-0557 | Danio rerio | 85.28 | 8e-83 | 251 |
| LLPS-Xim-2395 | Xiphophorus maculatus | 85.0 | 7e-80 | 244 |
| LLPS-Ten-0878 | Tetraodon nigroviridis | 84.57 | 2e-78 | 241 |
| LLPS-Pof-3520 | Poecilia formosa | 84.05 | 1e-80 | 246 |
| LLPS-Orl-1319 | Oryzias latipes | 84.05 | 5e-81 | 246 |
| LLPS-Anc-2637 | Anolis carolinensis | 83.54 | 3e-78 | 240 |
| LLPS-Orc-0905 | Oryctolagus cuniculus | 82.93 | 4e-80 | 243 |
| LLPS-Xet-3572 | Xenopus tropicalis | 82.32 | 1e-78 | 241 |
| LLPS-Maf-1744 | Macaca fascicularis | 81.71 | 7e-73 | 226 |
| LLPS-Mup-3742 | Mustela putorius furo | 81.71 | 7e-73 | 226 |
| LLPS-Ova-0566 | Ovis aries | 81.71 | 5e-73 | 227 |
| LLPS-Tut-1320 | Tursiops truncatus | 81.71 | 7e-73 | 226 |
| LLPS-Gaa-2175 | Gasterosteus aculeatus | 80.98 | 1e-76 | 236 |
| LLPS-Mea-0512 | Mesocricetus auratus | 80.49 | 2e-72 | 225 |
| LLPS-Tag-2028 | Taeniopygia guttata | 77.39 | 3e-41 | 143 |
| LLPS-Lac-2023 | Latimeria chalumnae | 75.46 | 4e-72 | 224 |
| LLPS-Fud-3430 | Fukomys damarensis | 73.78 | 8e-61 | 195 |
| LLPS-Meg-1512 | Meleagris gallopavo | 72.37 | 5e-62 | 198 |
| LLPS-Anp-1388 | Anas platyrhynchos | 72.37 | 3e-62 | 198 |
| LLPS-Ora-2206 | Ornithorhynchus anatinus | 72.37 | 4e-62 | 198 |
| LLPS-Viv-2258 | Vitis vinifera | 56.16 | 3e-09 | 57.8 |
| LLPS-Gor-2058 | Gossypium raimondii | 53.7 | 6e-11 | 62.4 |
| LLPS-Met-1412 | Medicago truncatula | 53.7 | 3e-10 | 59.7 |
| LLPS-Chr-0479 | Chlamydomonas reinhardtii | 52.83 | 3e-09 | 59.7 |
| LLPS-Mae-1666 | Manihot esculenta | 51.85 | 3e-09 | 57.4 |
| LLPS-Pot-1807 | Populus trichocarpa | 51.85 | 7e-09 | 57.4 |
| LLPS-Coc-1111 | Corchorus capsularis | 51.85 | 8e-10 | 58.9 |
| LLPS-Hea-2563 | Helianthus annuus | 51.85 | 1e-09 | 58.5 |
| LLPS-Brd-2036 | Brachypodium distachyon | 51.76 | 2e-09 | 57.8 |
| LLPS-Bro-2590 | Brassica oleracea | 50.75 | 2e-09 | 57.4 |
| LLPS-Phv-2289 | Phaseolus vulgaris | 50.0 | 3e-09 | 57.4 |
| LLPS-Thc-1459 | Theobroma cacao | 50.0 | 1e-09 | 58.9 |
| LLPS-Php-0085 | Physcomitrella patens | 49.32 | 2e-09 | 58.2 |
| LLPS-Brr-0203 | Brassica rapa | 46.58 | 5e-08 | 56.2 |
| LLPS-Asf-1549 | Aspergillus flavus | 45.31 | 3e-10 | 59.3 |
| LLPS-Put-1068 | Puccinia triticina | 45.28 | 7e-10 | 58.2 |
| LLPS-Tra-1154 | Triticum aestivum | 45.21 | 3e-09 | 59.7 |
| LLPS-Sol-1219 | Solanum lycopersicum | 43.06 | 2e-08 | 57.4 |
| LLPS-Sot-0175 | Solanum tuberosum | 43.06 | 2e-08 | 57.0 |
| LLPS-Osl-0200 | Ostreococcus lucimarinus | 39.47 | 2e-10 | 62.4 |
| LLPS-Amt-0851 | Amborella trichopoda | 38.36 | 8e-08 | 55.5 |