LLPS-Thc-1459
TCM_021706
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | High mobility group B1 isoform 3 |
| Gene Name: | TCM_021706 |
| Ensembl Gene: | TCM_021706 |
| Ensembl Protein: | EOY07230 |
| Organism: | Theobroma cacao |
| Taxa ID: | 3641 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EOY07230 | EOY07230 |
| Ensembl | EOY07229 | EOY07229 |
| Ensembl | EOY07227 | EOY07227 |
| Ensembl | EOY07224 | EOY07224 |
| Ensembl | EOY07228 | EOY07228 |
| Ensembl | EOY07223 | EOY07223 |
| Ensembl | EOY07226 | EOY07226 |
| Ensembl | EOY07225 | EOY07225 |
| UniProt | A0A061EQE2, A0A061EQE2_THECC | |
| GeneBank | CM001883 | EOY07228.1, EOY07230.1, EOY07225.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKGARGKGAA RNTAEALRPA DDRKVGKRKA LVDQSSIRKA KKERRAMKDP NKPKRPPSAF 60 61 FVFLEEFRAT FKKENPNVKA VSAVGKAAGE KWKSLSEDEK APYEAKAAKR KADYEKQMNA 120 121 YNRKQETAAN GEESEKSKSE VNDEDDEASG EVDNNSRTMR RRKKRKRTKM MIEKVDG 177 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAGGGAG CTAGAGGCAA GGGTGCAGCG AGGAACACGG CCGAAGCCTT GAGGCCTGCT 60 61 GACGACAGAA AGGTTGGGAA GCGGAAGGCG CTCGTTGACC AAAGCAGCAT ACGGAAAGCC 120 121 AAGAAGGAGA GAAGGGCTAT GAAAGACCCC AACAAACCAA AGAGGCCTCC TAGTGCTTTC 180 181 TTTGTGTTTC TCGAGGAGTT TAGAGCTACT TTCAAGAAGG AAAATCCTAA CGTGAAGGCT 240 241 GTATCAGCTG TTGGGAAAGC TGCGGGTGAG AAGTGGAAAT CCTTGTCTGA GGATGAAAAA 300 301 GCTCCTTATG AGGCCAAAGC TGCAAAACGG AAGGCTGACT ACGAAAAGCA AATGAATGCC 360 361 TACAACAGGA AGCAGGAAAC TGCTGCTAAT GGTGAGGAGT CGGAGAAGTC AAAATCGGAG 420 421 GTGAATGATG AAGACGATGA GGCTAGTGGA GAGGAAGGAC AACAACAGCC GGACGATGAG 480 481 GAGGAG 486 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hea-2563 | Helianthus annuus | 80.81 | 3e-36 | 129 |
| LLPS-Gor-2058 | Gossypium raimondii | 78.63 | 1e-52 | 172 |
| LLPS-Coc-1111 | Corchorus capsularis | 75.52 | 5e-52 | 170 |
| LLPS-Mae-1666 | Manihot esculenta | 73.72 | 1e-57 | 184 |
| LLPS-Prp-1633 | Prunus persica | 73.55 | 4e-54 | 176 |
| LLPS-Glm-0739 | Glycine max | 72.67 | 5e-51 | 168 |
| LLPS-Vir-1335 | Vigna radiata | 71.91 | 1e-26 | 103 |
| LLPS-Phv-2289 | Phaseolus vulgaris | 71.9 | 6e-53 | 173 |
| LLPS-Arl-2556 | Arabidopsis lyrata | 70.39 | 7e-55 | 178 |
| LLPS-Pot-1807 | Populus trichocarpa | 70.31 | 2e-42 | 147 |
| LLPS-Brn-2128 | Brassica napus | 70.07 | 5e-50 | 166 |
| LLPS-Art-1177 | Arabidopsis thaliana | 69.74 | 6e-54 | 176 |
| LLPS-Bro-2882 | Brassica oleracea | 69.72 | 5e-48 | 160 |
| LLPS-Met-1645 | Medicago truncatula | 69.39 | 1e-41 | 144 |
| LLPS-Viv-2258 | Vitis vinifera | 69.39 | 2e-44 | 151 |
| LLPS-Tra-1806 | Triticum aestivum | 69.33 | 4e-20 | 87.4 |
| LLPS-Mua-2476 | Musa acuminata | 65.18 | 6e-30 | 113 |
| LLPS-Via-2045 | Vigna angularis | 64.08 | 6e-24 | 97.1 |
| LLPS-Nia-1249 | Nicotiana attenuata | 62.18 | 3e-35 | 127 |
| LLPS-Sem-2154 | Selaginella moellendorffii | 61.9 | 7e-20 | 84.7 |
| LLPS-Sol-0362 | Solanum lycopersicum | 60.0 | 2e-35 | 127 |
| LLPS-Brr-2599 | Brassica rapa | 59.87 | 4e-42 | 144 |
| LLPS-Sot-2091 | Solanum tuberosum | 59.38 | 2e-36 | 130 |
| LLPS-Amt-1514 | Amborella trichopoda | 58.2 | 2e-28 | 109 |
| LLPS-Zem-2012 | Zea mays | 55.04 | 3e-24 | 98.2 |
| LLPS-Scf-2108 | Scleropages formosus | 54.55 | 1e-12 | 67.4 |
| LLPS-Tru-1959 | Triticum urartu | 54.47 | 4e-20 | 87.4 |
| LLPS-Cus-1976 | Cucumis sativus | 53.61 | 1e-16 | 77.4 |
| LLPS-Php-0085 | Physcomitrella patens | 53.38 | 5e-26 | 103 |
| LLPS-Orl-0624 | Oryzias latipes | 52.63 | 1e-12 | 67.4 |
| LLPS-Otg-2524 | Otolemur garnettii | 52.63 | 7e-12 | 64.7 |
| LLPS-Orb-1408 | Oryza barthii | 52.31 | 3e-22 | 94.7 |
| LLPS-Icp-3145 | Ictalurus punctatus | 51.95 | 1e-09 | 58.5 |
| LLPS-Brd-2036 | Brachypodium distachyon | 51.94 | 2e-22 | 93.6 |
| LLPS-Orni-1360 | Oryza nivara | 51.89 | 1e-21 | 91.3 |
| LLPS-Orgl-1111 | Oryza glumaepatula | 51.89 | 9e-22 | 91.7 |
| LLPS-Mea-1807 | Mesocricetus auratus | 51.32 | 6e-12 | 65.1 |
| LLPS-Mum-0550 | Mus musculus | 51.32 | 4e-12 | 65.5 |
| LLPS-Sus-2109 | Sus scrofa | 51.32 | 1e-11 | 63.9 |
| LLPS-Ran-2576 | Rattus norvegicus | 51.32 | 7e-12 | 64.7 |
| LLPS-Ova-0029 | Ovis aries | 51.32 | 2e-11 | 63.9 |
| LLPS-Mup-1463 | Mustela putorius furo | 51.32 | 1e-11 | 64.3 |
| LLPS-Xim-1096 | Xiphophorus maculatus | 51.32 | 5e-12 | 65.1 |
| LLPS-Tut-1437 | Tursiops truncatus | 51.32 | 1e-11 | 63.9 |
| LLPS-Bot-3605 | Bos taurus | 51.32 | 1e-11 | 63.9 |
| LLPS-Pes-1065 | Pelodiscus sinensis | 51.32 | 1e-11 | 63.9 |
| LLPS-Fia-0125 | Ficedula albicollis | 51.32 | 2e-11 | 63.9 |
| LLPS-Orc-3177 | Oryctolagus cuniculus | 51.32 | 6e-12 | 65.1 |
| LLPS-Orn-2773 | Oreochromis niloticus | 51.32 | 2e-12 | 66.2 |
| LLPS-Urm-1432 | Ursus maritimus | 51.32 | 9e-12 | 64.3 |
| LLPS-Pof-2475 | Poecilia formosa | 51.32 | 5e-12 | 65.5 |
| LLPS-Meg-1512 | Meleagris gallopavo | 51.32 | 2e-11 | 63.9 |
| LLPS-Fec-2341 | Felis catus | 51.32 | 9e-12 | 64.3 |
| LLPS-Mod-3321 | Monodelphis domestica | 51.32 | 1e-11 | 64.3 |
| LLPS-Anp-1388 | Anas platyrhynchos | 51.32 | 2e-11 | 63.5 |
| LLPS-Cas-3712 | Carlito syrichta | 51.32 | 6e-12 | 65.1 |
| LLPS-Gaga-3136 | Gallus gallus | 51.32 | 2e-11 | 63.9 |
| LLPS-Tag-1885 | Taeniopygia guttata | 51.32 | 2e-11 | 63.9 |
| LLPS-Caf-0018 | Canis familiaris | 51.32 | 2e-11 | 63.9 |
| LLPS-Ten-0878 | Tetraodon nigroviridis | 51.32 | 8e-13 | 67.8 |
| LLPS-Eqc-3412 | Equus caballus | 51.32 | 2e-11 | 64.3 |
| LLPS-Cap-2614 | Cavia porcellus | 51.32 | 6e-12 | 65.1 |
| LLPS-Gog-0861 | Gorilla gorilla | 50.0 | 2e-11 | 63.5 |
| LLPS-Asm-2424 | Astyanax mexicanus | 50.0 | 1e-10 | 61.6 |
| LLPS-Caj-1376 | Callithrix jacchus | 50.0 | 2e-11 | 63.5 |
| LLPS-Maf-3446 | Macaca fascicularis | 50.0 | 2e-11 | 63.5 |
| LLPS-Aon-1726 | Aotus nancymaae | 50.0 | 2e-11 | 63.5 |
| LLPS-Cea-0129 | Cercocebus atys | 50.0 | 2e-11 | 63.5 |
| LLPS-Paa-2895 | Papio anubis | 50.0 | 2e-11 | 63.5 |
| LLPS-Tar-1762 | Takifugu rubripes | 50.0 | 4e-12 | 65.5 |
| LLPS-Rhb-4487 | Rhinopithecus bieti | 50.0 | 2e-11 | 63.2 |
| LLPS-Pap-2100 | Pan paniscus | 50.0 | 2e-11 | 63.5 |
| LLPS-Pat-3480 | Pan troglodytes | 50.0 | 2e-11 | 63.2 |
| LLPS-Hos-0629 | Homo sapiens | 50.0 | 2e-11 | 63.5 |
| LLPS-Dar-0695 | Danio rerio | 50.0 | 1e-13 | 70.5 |
| LLPS-Man-2521 | Macaca nemestrina | 50.0 | 2e-11 | 63.5 |
| LLPS-Xet-0538 | Xenopus tropicalis | 50.0 | 5e-11 | 62.4 |
| LLPS-Anc-0307 | Anolis carolinensis | 50.0 | 3e-11 | 63.2 |
| LLPS-Poa-2052 | Pongo abelii | 50.0 | 2e-11 | 63.9 |
| LLPS-Mam-0786 | Macaca mulatta | 50.0 | 2e-11 | 63.5 |
| LLPS-Chs-3987 | Chlorocebus sabaeus | 49.38 | 1e-09 | 58.9 |
| LLPS-Sah-1205 | Sarcophilus harrisii | 49.38 | 8e-10 | 59.3 |
| LLPS-Mal-3772 | Mandrillus leucophaeus | 49.38 | 1e-09 | 58.9 |
| LLPS-Myl-3223 | Myotis lucifugus | 49.38 | 1e-09 | 58.9 |
| LLPS-Aim-3443 | Ailuropoda melanoleuca | 49.38 | 9e-10 | 58.9 |
| LLPS-Dio-3445 | Dipodomys ordii | 49.38 | 1e-09 | 58.9 |
| LLPS-Loa-3655 | Loxodonta africana | 49.38 | 1e-09 | 58.9 |
| LLPS-Nol-4514 | Nomascus leucogenys | 49.38 | 1e-09 | 58.9 |
| LLPS-Leo-0831 | Lepisosteus oculatus | 49.32 | 3e-10 | 60.5 |
| LLPS-Scm-3044 | Scophthalmus maximus | 48.84 | 2e-10 | 60.5 |
| LLPS-Ora-2206 | Ornithorhynchus anatinus | 48.68 | 1e-11 | 63.9 |
| LLPS-Gaa-1811 | Gasterosteus aculeatus | 48.68 | 8e-12 | 64.7 |
| LLPS-Ict-2501 | Ictidomys tridecemlineatus | 48.68 | 6e-12 | 65.1 |
| LLPS-Fud-1002 | Fukomys damarensis | 47.37 | 3e-11 | 63.2 |
| LLPS-Hov-1351 | Hordeum vulgare | 47.37 | 6e-09 | 58.5 |
| LLPS-Lac-2023 | Latimeria chalumnae | 46.05 | 1e-10 | 61.2 |
| LLPS-Sei-1970 | Setaria italica | 44.87 | 1e-10 | 63.5 |
| LLPS-Dac-2458 | Daucus carota | 38.16 | 3e-12 | 64.7 |