• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Ori-0882
OsI_11126

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: DNA-directed RNA polymerase subunit beta
Gene Name: OsI_11126
Ensembl Gene: BGIOSGA010937
Ensembl Protein: BGIOSGA010937-PA
Organism: Oryza indica
Taxa ID: 39946
LLPS Type: Others


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ FUNCTION


DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

▼ CROSS REFERENCE


DatabaseNucleotide IDProtein ID
EnsemblBGIOSGA010937-TABGIOSGA010937-PA
UniProtB8AM31, B8AM31_ORYSI
GeneBankCM000128EEC75033.1

▼ SEQUENCE


Protein Sequence (FASTA)
1     MGSNLKEILD  NVSYPEIFLS  FPNAKEKKRI  ESKEKAILEF  YQQFACVGGD  LVFSESLCEE  60
61    LQKKFFQQKC  ELGRIGRRNM  NRRLNLDIPQ  NSTFLLPRDV  LAATDHLIGM  KFETGILDDD  120
121   DMNHLKNKRI  RSVADLLQDQ  FGLALGRLQH  AVQKTIRRVL  IRQSKPTPQT  LVTPTSTSIL  180
181   LITTYETFFG  TYPLSQVFDQ  TNPLTQTVHG  RKVSCLGPGG  LTGRTASFRS  RDIHPSHYGR  240
241   ICPIDTSEGI  NVGLTGSLAI  HARIDHWWGS  VESPFYEISE  KAKKKKERQV  VYLSPNRDEY  300
301   YMIAAGNSLS  LNRCIQEEQV  VPARYRQEFL  TIAWEQIHVR  SIFPFQYFSI  GGSLIPFIEH  360
361   NDANRALMSS  NMQRQADSRV  SVIAEREGKI  ISTNSHKILL  SSSGKTISIP  LVTHRRSNKN  420
421   TCMHQKPRVP  RGKSIKKGEI  LAEGAATVGG  ELALGKNVLV  AYMPWEGYNL  EDAVLISERL  480
481   VYEDIYTSFH  IRKYEIQTDT  TSQGSAEKIT  KEIPHLEEHL  LRNLDRNGVV  KLGSWVETGD  540
541   ILVGKLTPQI  ASESSYIAEA  GLLRAIFGLE  VSTSKETSLK  LPIGGRGRVI  DVKWIQRDPL  600
601   GIMVRVYILQ  KREIKVGDKV  AGRHGNKGII  SKILPRQDMP  YLQDGTPVDM  VFNPLGVPSR  660
661   MNVGQIFESS  LGLAGDLLKK  HYRIAPFDER  YEQEASRKLV  FSELYEASKQ  TKNPWVFEPE  720
721   YPGKSRIFDG  RTGDPFEQPV  LIGKSYILKL  IHQVDEKIHG  RSTGPYSLVT  QQPVRGRAKQ  780
781   GGQRIGEMEV  WALEGFGVAH  ILQEILTYKS  DHLIARQEIL  NATIWGKRVP  NHEDPPESFR  840
841   VLVRELRSLA  LELNHFLVSQ  KNFQVNREEV  870
Nucleotide CDS Sequence (FASTA)
1     ATGGGTTCAA  ATCTAAAAGA  AATTCTAGAT  AATGTTTCCT  ACCCTGAAAT  TTTCTTGTCT  60
61    TTCCCTAATG  CTAAGGAGAA  GAAGAGGATT  GAGTCAAAAG  AAAAAGCTAT  TTTGGAGTTT  120
121   TATCAACAAT  TTGCTTGTGT  AGGCGGGGAC  CTGGTATTTT  CGGAATCCTT  ATGTGAGGAA  180
181   TTACAAAAGA  AATTTTTTCA  ACAAAAATGT  GAATTAGGAA  GGATTGGTCG  ACGAAATATG  240
241   AATCGAAGAC  TGAATCTTGA  TATACCTCAG  AACAGCACCT  TCTTGTTACC  GCGAGATGTA  300
301   TTGGCCGCTA  CGGATCATTT  GATTGGAATG  AAATTTGAAA  CGGGTATACT  TGACGATGAC  360
361   GATATGAATC  ACTTGAAAAA  TAAACGTATT  CGTTCGGTTG  CGGATCTGTT  ACAAGATCAA  420
421   TTCGGACTGG  CTCTTGGTCG  TTTACAACAT  GCGGTTCAAA  AAACTATCCG  TAGAGTATTG  480
481   ATACGTCAAT  CAAAACCGAC  TCCACAAACT  TTGGTAACTC  CAACTTCAAC  CTCGATTTTA  540
541   TTAATAACTA  CTTACGAGAC  CTTCTTTGGT  ACATATCCCT  TATCTCAAGT  TTTTGATCAA  600
601   ACCAATCCAT  TGACACAAAC  GGTTCATGGG  CGAAAAGTGA  GTTGTTTGGG  TCCTGGAGGA  660
661   TTGACGGGGA  GAACTGCAAG  TTTTCGGAGC  CGAGATATCC  ATCCGAGTCA  CTATGGGCGT  720
721   ATTTGTCCAA  TTGACACGTC  CGAAGGAATC  AACGTTGGAC  TTACTGGATC  TTTAGCTATT  780
781   CATGCGAGAA  TTGATCATTG  GTGGGGATCC  GTAGAGAGTC  CATTTTATGA  AATATCTGAG  840
841   AAAGCAAAGA  AAAAAAAAGA  GAGACAGGTG  GTTTATTTAT  CACCAAATAG  AGATGAGTAT  900
901   TATATGATAG  CAGCAGGAAA  TTCTTTGTCC  TTGAATCGGT  GTATTCAGGA  AGAACAGGTT  960
961   GTTCCAGCTA  GATACCGTCA  AGAATTCCTG  ACTATTGCAT  GGGAACAGAT  TCATGTTAGA  1020
1021  AGTATTTTTC  CTTTCCAATA  TTTTTCTATT  GGGGGTTCTC  TCATTCCTTT  TATTGAGCAT  1080
1081  AATGATGCGA  ATCGAGCTTT  AATGAGTTCT  AATATGCAGC  GCCAAGCAGA  TTCGAGGGTT  1140
1141  TCTGTTATAG  CCGAACGCGA  GGGAAAGATC  ATTTCTACTA  ATAGTCACAA  GATCCTTTTA  1200
1201  TCAAGTAGTG  GGAAGACTAT  AAGTATTCCT  TTAGTTACCC  ATCGGCGCTC  TAACAAAAAT  1260
1261  ACTTGTATGC  ACCAAAAACC  TCGGGTTCCG  CGGGGTAAAT  CCATTAAAAA  AGGAGAAATT  1320
1321  TTAGCGGAGG  GGGCTGCTAC  GGTTGGTGGG  GAACTTGCTT  TAGGAAAAAA  CGTATTAGTA  1380
1381  GCTTATATGC  CATGGGAAGG  TTACAATTTG  GAAGACGCAG  TATTAATTAG  CGAACGTTTG  1440
1441  GTATATGAGG  ATATTTATAC  TTCTTTTCAC  ATCCGAAAAT  ATGAAATTCA  GACGGATACG  1500
1501  ACAAGCCAAG  GCTCCGCTGA  AAAAATCACT  AAAGAAATAC  CACATCTAGA  AGAACATTTA  1560
1561  CTCCGCAATT  TGGACAGAAA  TGGAGTTGTG  AAGTTGGGGT  CCTGGGTAGA  AACAGGCGAT  1620
1621  ATTTTAGTAG  GTAAATTAAC  GCCTCAGATA  GCGAGCGAAT  CGTCCTATAT  CGCGGAAGCT  1680
1681  GGATTATTAC  GGGCCATATT  TGGTCTTGAG  GTATCCACTT  CAAAAGAAAC  TTCTCTCAAA  1740
1741  CTACCGATAG  GTGGAAGAGG  GCGCGTTATC  GATGTGAAAT  GGATCCAGAG  GGATCCCCTC  1800
1801  GGCATAATGG  TTCGTGTATA  TATTTTACAA  AAACGCGAAA  TCAAAGTTGG  GGATAAAGTA  1860
1861  GCCGGAAGAC  ACGGGAATAA  GGGGATCATT  TCAAAAATTT  TGCCTAGGCA  AGATATGCCC  1920
1921  TATTTGCAAG  ATGGAACGCC  TGTTGATATG  GTTTTCAATC  CCTTAGGAGT  ACCCTCCCGA  1980
1981  ATGAATGTGG  GACAAATATT  TGAAAGCTCG  CTCGGATTAG  CAGGGGATCT  GCTAAAGAAA  2040
2041  CATTATAGAA  TAGCACCCTT  TGATGAGAGA  TATGAGCAAG  AGGCTTCAAG  AAAACTTGTG  2100
2101  TTTTCAGAAT  TATATGAAGC  CAGTAAACAA  ACAAAAAATC  CGTGGGTATT  TGAACCCGAG  2160
2161  TACCCGGGAA  AAAGCAGAAT  ATTTGATGGA  AGAACAGGAG  ACCCCTTCGA  ACAGCCTGTT  2220
2221  CTAATAGGGA  AGTCCTATAT  CTTAAAATTA  ATTCATCAAG  TTGATGAGAA  AATCCACGGA  2280
2281  CGCTCTACTG  GGCCCTATTC  ACTTGTTACA  CAACAACCCG  TTAGAGGAAG  AGCCAAGCAA  2340
2341  GGGGGACAAC  GAATAGGAGA  AATGGAAGTT  TGGGCTTTAG  AAGGATTTGG  TGTTGCTCAT  2400
2401  ATTTTACAAG  AGATACTTAC  TTATAAATCT  GATCATCTTA  TAGCTCGCCA  AGAAATACTT  2460
2461  AACGCTACGA  TCTGGGGAAA  ACGAGTACCT  AATCACGAGG  ATCCTCCAGA  ATCTTTTCGA  2520
2521  GTGCTTGTTC  GAGAACTACG  ATCTTTGGCT  CTAGAACTGA  ACCATTTCCT  TGTATCTCAG  2580
2581  AAGAACTTCC  AGGTTAATAG  GGAAGAAGTT  TGA  2613

▼ KEYWORD


ID
Family
Complete proteome
DNA-directed RNA polymerase
Nucleotidyltransferase
Reference proteome
Transcription
Transferase

▼ GENE ONTOLOGY


ID
Classification
Description
Molecular Function
DNA binding
Molecular Function
DNA-directed 5'-3' RNA polymerase activity
Molecular Function
Ribonucleoside binding
Biological Process
Transcription, DNA-templated

▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Ors-2101Oryza sativa97.080.01738
LLPS-Tra-1603Triticum aestivum96.981e-159 473
LLPS-Orbr-1673Oryza brachyantha96.630.01728
LLPS-Sob-1479Sorghum bicolor95.855e-111 354
LLPS-Hov-0875Hordeum vulgare95.290.01709
LLPS-Org-1210Oryza glaberrima95.260.01608
LLPS-Tru-0255Triticum urartu95.070.01706
LLPS-Zem-1062Zea mays94.950.01710
LLPS-Coc-0621Corchorus capsularis85.711e-123 379
LLPS-Sot-2296Solanum tuberosum82.850.0 697
LLPS-Dac-2449Daucus carota82.12e-131 399
LLPS-Phv-0490Phaseolus vulgaris78.526e-72 241
LLPS-Brd-0687Brachypodium distachyon77.271e-142 437
LLPS-Art-1664Arabidopsis thaliana76.920.01383
LLPS-Arl-2473Arabidopsis lyrata76.050.01342
LLPS-Via-2093Vigna angularis74.790.0 909
LLPS-Brn-2870Brassica napus74.210.01120
LLPS-Met-1021Medicago truncatula73.830.01315
LLPS-Amt-0841Amborella trichopoda73.20.0 736
LLPS-Sei-1606Setaria italica72.830.01099
LLPS-Pot-0548Populus trichocarpa71.910.01263
LLPS-Mae-2551Manihot esculenta66.850.0 904
LLPS-Gor-2562Gossypium raimondii66.520.0 591
LLPS-Bro-2149Brassica oleracea61.10.0 780
LLPS-Sem-1499Selaginella moellendorffii50.620.0 808
LLPS-Sol-0568Solanum lycopersicum49.893e-124 389
LLPS-Chc-0942Chondrus crispus47.00.0 781
LLPS-Gas-0467Galdieria sulphuraria45.320.0 768
LLPS-Cym-1025Cyanidioschyzon merolae44.940.0 715
LLPS-Usm-0121Ustilago maydis30.652e-37 155
LLPS-Spr-1537Sporisorium reilianum30.418e-37 154
LLPS-Cap-3404Cavia porcellus29.713e-36 152
LLPS-Glm-0004Glycine max29.592e-37 156
LLPS-Nef-1131Neosartorya fischeri29.42e-39 162
LLPS-Asfu-0035Aspergillus fumigatus29.42e-39 162
LLPS-Tum-1130Tuber melanosporum29.234e-36 147
LLPS-Pug-0855Puccinia graminis29.089e-37 154
LLPS-Prp-0183Prunus persica28.851e-35 150
LLPS-Miv-0555Microbotryum violaceum28.844e-41 168
LLPS-Put-0759Puccinia triticina28.462e-36 153
LLPS-Loa-2616Loxodonta africana28.372e-39 162
LLPS-Cis-0785Ciona savignyi28.312e-36 153
LLPS-Phn-0145Phaeosphaeria nodorum28.062e-39 162
LLPS-Gag-0379Gaeumannomyces graminis27.865e-40 164
LLPS-Scs-0026Sclerotinia sclerotiorum27.791e-38 159
LLPS-Paa-2512Papio anubis27.772e-38 159
LLPS-Map-0804Magnaporthe poae27.657e-40 164
LLPS-Blg-0398Blumeria graminis27.586e-36 151
LLPS-Mao-0645Magnaporthe oryzae27.492e-40 165
LLPS-Mod-2313Monodelphis domestica27.497e-39 160
LLPS-Asni-0605Aspergillus niger27.414e-39 161
LLPS-Ten-0716Tetraodon nigroviridis27.356e-39 160
LLPS-Php-1074Physcomitrella patens27.333e-36 152
LLPS-Maf-0626Macaca fascicularis27.292e-38 159
LLPS-Ora-1553Ornithorhynchus anatinus27.293e-38 159
LLPS-Sah-0969Sarcophilus harrisii27.292e-38 159
LLPS-Cea-3260Cercocebus atys27.292e-38 159
LLPS-Sus-4181Sus scrofa27.291e-38 159
LLPS-Gog-1091Gorilla gorilla27.292e-38 159
LLPS-Fud-0805Fukomys damarensis27.292e-38 159
LLPS-Dio-0309Dipodomys ordii27.292e-38 159
LLPS-Bot-0962Bos taurus27.292e-38 159
LLPS-Mal-0308Mandrillus leucophaeus27.292e-38 159
LLPS-Aim-3692Ailuropoda melanoleuca27.292e-38 159
LLPS-Mup-0936Mustela putorius furo27.292e-38 159
LLPS-Ova-2218Ovis aries27.292e-38 159
LLPS-Pat-3630Pan troglodytes27.292e-38 159
LLPS-Pap-2015Pan paniscus27.292e-38 159
LLPS-Urm-2340Ursus maritimus27.292e-38 159
LLPS-Hos-0249Homo sapiens27.292e-38 159
LLPS-Fec-1925Felis catus27.292e-38 159
LLPS-Man-3572Macaca nemestrina27.292e-38 159
LLPS-Otg-4418Otolemur garnettii27.292e-38 159
LLPS-Orc-2515Oryctolagus cuniculus27.292e-38 159
LLPS-Poa-1582Pongo abelii27.292e-38 159
LLPS-Caf-0747Canis familiaris27.292e-38 159
LLPS-Eqc-3698Equus caballus27.292e-38 159
LLPS-Mam-3334Macaca mulatta27.292e-38 159
LLPS-Cas-0116Carlito syrichta27.292e-38 159
LLPS-Ict-1920Ictidomys tridecemlineatus27.292e-38 159
LLPS-Nol-2852Nomascus leucogenys27.292e-38 159
LLPS-Scc-0115Schizosaccharomyces cryophilus27.279e-38 157
LLPS-Crn-0312Cryptococcus neoformans27.241e-41 169
LLPS-Lem-0381Leptosphaeria maculans27.223e-38 159
LLPS-Pyt-1038Pyrenophora teres27.224e-38 158
LLPS-Pytr-0693Pyrenophora triticirepentis27.225e-38 158
LLPS-Osl-0010Ostreococcus lucimarinus27.27e-39 160
LLPS-Icp-1146Ictalurus punctatus27.141e-38 159
LLPS-Tar-0153Takifugu rubripes27.142e-38 159
LLPS-Mea-1795Mesocricetus auratus27.095e-38 157
LLPS-Mum-3936Mus musculus27.095e-38 158
LLPS-Ran-3571Rattus norvegicus27.096e-38 157
LLPS-Asc-1129Aspergillus clavatus27.062e-39 162
LLPS-Asg-0551Ashbya gossypii27.042e-37 155
LLPS-Orl-2631Oryzias latipes27.02e-38 159
LLPS-Ved-0140Verticillium dahliae26.957e-36 151
LLPS-Asm-3288Astyanax mexicanus26.945e-38 158
LLPS-Scm-3600Scophthalmus maximus26.945e-39 161
LLPS-Xim-2898Xiphophorus maculatus26.82e-38 159
LLPS-Pof-0752Poecilia formosa26.83e-38 159
LLPS-Sac-0104Saccharomyces cerevisiae26.745e-36 151
LLPS-Cogr-0746Colletotrichum graminicola26.749e-36 150
LLPS-Leo-2449Lepisosteus oculatus26.736e-38 157
LLPS-Orn-2781Oreochromis niloticus26.734e-38 157
LLPS-Yal-0263Yarrowia lipolytica26.632e-36 152
LLPS-Fus-1211Fusarium solani26.631e-35 150
LLPS-Xet-1621Xenopus tropicalis26.626e-37 154
LLPS-Gaa-3718Gasterosteus aculeatus26.61e-37 157
LLPS-Drm-0564Drosophila melanogaster26.596e-37 154
LLPS-Mel-0342Melampsora laricipopulina26.544e-40 164
LLPS-Abg-0321Absidia glauca26.533e-37 155
LLPS-Zyt-0543Zymoseptoria tritici26.538e-37 154
LLPS-Anc-0422Anolis carolinensis26.513e-36 150
LLPS-Fia-0179Ficedula albicollis26.492e-37 156
LLPS-Beb-0210Beauveria bassiana26.477e-36 151
LLPS-Trv-0401Trichoderma virens26.474e-36 152
LLPS-Chr-0057Chlamydomonas reinhardtii26.432e-36 153
LLPS-Dar-0765Danio rerio26.42e-37 156
LLPS-Mua-0980Musa acuminata26.335e-37 155
LLPS-Ast-0573Aspergillus terreus26.332e-38 159
LLPS-Aon-1092Aotus nancymaae26.321e-38 160
LLPS-Coo-0556Colletotrichum orbiculare26.324e-36 152
LLPS-Caj-3886Callithrix jacchus26.321e-38 160
LLPS-Dos-0899Dothistroma septosporum26.322e-36 152
LLPS-Orb-1815Oryza barthii26.298e-40 163
LLPS-Orni-2111Oryza nivara26.299e-40 163
LLPS-Anp-0507Anas platyrhynchos26.293e-37 155
LLPS-Pes-0211Pelodiscus sinensis26.292e-37 155
LLPS-Orr-0301Oryza rufipogon26.299e-40 163
LLPS-Gaga-0792Gallus gallus26.294e-37 155
LLPS-Tag-0905Taeniopygia guttata26.294e-37 155
LLPS-Trr-0133Trichoderma reesei26.266e-36 151
LLPS-Lac-1984Latimeria chalumnae26.122e-36 153
LLPS-Orp-0749Oryza punctata26.123e-39 162
LLPS-Cae-0102Caenorhabditis elegans26.064e-36 152
LLPS-Scf-2060Scleropages formosus25.957e-37 154
LLPS-Asn-0417Aspergillus nidulans25.811e-35 150
LLPS-Aso-0335Aspergillus oryzae25.751e-35 150
LLPS-Viv-0403Vitis vinifera25.751e-36 153
LLPS-Hea-1304Helianthus annuus25.662e-36 152
LLPS-Chs-0997Chlorocebus sabaeus25.491e-36 153
LLPS-Rhb-0530Rhinopithecus bieti25.491e-36 153
LLPS-Vir-1546Vigna radiata25.472e-36 153
LLPS-Brr-0612Brassica rapa25.471e-36 154
LLPS-Lep-1850Leersia perrieri25.332e-41 169
LLPS-Myl-0711Myotis lucifugus25.34e-37 155
LLPS-Kop-0047Komagataella pastoris25.051e-36 153
LLPS-Cus-0573Cucumis sativus25.052e-36 152
LLPS-Thc-0404Theobroma cacao24.574e-36 152