DrLLPS - Data resource of LLPS

LLPS-Org-0221

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Histone H4
Ensembl Gene:	ORGLA01G0302200
Ensembl Protein:	ORGLA01G0302200.1
Organism:	Oryza glaberrima
Taxa ID:	4538
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Chromatin, Nucleolus, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Rattus norvegicus	LLPS-Ran-0020	P62804	Client	Chromatoid body	97.56	1e-50	162
Arabidopsis thaliana	LLPS-Art-0418	P59259	Client	Nucleolus	100.00	4e-51	162
Mus musculus	LLPS-Mum-0813	P62806	Client	Chromatin	97.56	1e-50	162
Oreochromis niloticus	LLPS-Orn-0302	P62796	Client	Nucleolus	97.56	1e-50	162

▼ FUNCTION

Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ORGLA01G0302200.1	ORGLA01G0302200.1
UniProt		I1QBF3, I1QBF3_ORYGL

▼ SEQUENCE

Protein Sequence (FASTA)
1 MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK 60 61 IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG FGG 103
Nucleotide CDS Sequence (FASTA)
1 ATGTCGGGGC GCGGCAAGGG CGGCAAGGGG CTCGGCAAGG GCGGCGCGAA GAGGCATCGC 60 61 AAGGTGCTCC GCGACAACAT CCAGGGCATC ACCAAGCCGG CGATCCGGAG GCTGGCGAGG 120 121 AGGGGCGGCG TGAAGCGCAT CTCCGGGCTG ATCTACGAGG AGACCCGCGG CGTGCTCAAG 180 181 ATCTTCCTCG AGAACGTCAT CCGCGACGCC GTCACCTACA CGGAGCACGC CCGCCGCAAG 240 241 ACCGTCACCG CCATGGACGT CGTCTACGCG CTCAAGCGCC AGGGCCGCAC CCTCTACGGC 300 301 TTCGGCGGCT GA 312

▼ KEYWORD

ID	Family
KW-0158	Chromosome
KW-0181	Complete proteome
KW-0238	DNA-binding
KW-0544	Nucleosome core
KW-0539	Nucleus
KW-1185	Reference proteome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0009507	Cellular Component	Chloroplast
GO:0005829	Cellular Component	Cytosol
GO:0005730	Cellular Component	Nucleolus
GO:0000786	Cellular Component	Nucleosome
GO:0005886	Cellular Component	Plasma membrane
GO:0009506	Cellular Component	Plasmodesma
GO:0009579	Cellular Component	Thylakoid
GO:0005774	Cellular Component	Vacuolar membrane
GO:0003677	Molecular Function	DNA binding
GO:0046982	Molecular Function	Protein heterodimerization activity
GO:0006334	Biological Process	Nucleosome assembly
GO:0009414	Biological Process	Response to water deprivation

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Sot-1228	Solanum tuberosum	100.0	4e-51	162
LLPS-Lep-0362	Leersia perrieri	100.0	4e-51	162
LLPS-Orgl-0437	Oryza glumaepatula	100.0	4e-51	162
LLPS-Via-0106	Vigna angularis	100.0	4e-51	162
LLPS-Vir-0658	Vigna radiata	100.0	4e-51	162
LLPS-Arl-1462	Arabidopsis lyrata	100.0	1e-47	154
LLPS-Tra-0677	Triticum aestivum	100.0	4e-51	162
LLPS-Brd-0624	Brachypodium distachyon	100.0	5e-51	166
LLPS-Met-1109	Medicago truncatula	100.0	4e-51	162
LLPS-Hov-0272	Hordeum vulgare	100.0	5e-52	167
LLPS-Sei-0527	Setaria italica	100.0	2e-51	165
LLPS-Cus-1036	Cucumis sativus	100.0	4e-51	162
LLPS-Ori-0776	Oryza indica	100.0	4e-51	162
LLPS-Brn-0121	Brassica napus	100.0	4e-51	162
LLPS-Orb-0513	Oryza barthii	100.0	4e-51	162
LLPS-Sem-0538	Selaginella moellendorffii	100.0	2e-50	161
LLPS-Sol-1228	Solanum lycopersicum	100.0	4e-51	162
LLPS-Glm-0119	Glycine max	100.0	4e-51	162
LLPS-Dac-0265	Daucus carota	100.0	4e-51	162
LLPS-Orni-0640	Oryza nivara	100.0	4e-51	162
LLPS-Mua-0622	Musa acuminata	100.0	4e-51	162
LLPS-Thc-0226	Theobroma cacao	100.0	2e-51	165
LLPS-Php-0013	Physcomitrella patens	100.0	4e-51	162
LLPS-Hea-1065	Helianthus annuus	100.0	2e-51	166
LLPS-Prp-0437	Prunus persica	100.0	4e-51	162
LLPS-Coc-0352	Corchorus capsularis	100.0	4e-51	162
LLPS-Orr-0298	Oryza rufipogon	100.0	4e-51	162
LLPS-Orm-0397	Oryza meridionalis	100.0	4e-51	162
LLPS-Tru-0020	Triticum urartu	100.0	4e-51	162
LLPS-Zem-0328	Zea mays	100.0	4e-51	162
LLPS-Bro-0448	Brassica oleracea	100.0	4e-51	162
LLPS-Orp-0480	Oryza punctata	100.0	4e-51	162
LLPS-Pot-0544	Populus trichocarpa	100.0	4e-51	162
LLPS-Ors-0700	Oryza sativa	100.0	4e-51	162
LLPS-Brr-1059	Brassica rapa	100.0	4e-51	162
LLPS-Art-0418	Arabidopsis thaliana	100.0	4e-51	162
LLPS-Gor-0062	Gossypium raimondii	100.0	3e-51	165
LLPS-Viv-0467	Vitis vinifera	100.0	4e-51	162
LLPS-Nia-1183	Nicotiana attenuata	100.0	4e-51	162
LLPS-Mae-1045	Manihot esculenta	100.0	4e-51	162
LLPS-Phv-0839	Phaseolus vulgaris	100.0	1e-50	164
LLPS-Amt-0348	Amborella trichopoda	100.0	4e-51	162
LLPS-Sob-0572	Sorghum bicolor	100.0	1e-51	167
LLPS-Orbr-0086	Oryza brachyantha	100.0	4e-51	162
LLPS-Osl-0587	Ostreococcus lucimarinus	98.78	7e-51	162
LLPS-Scf-0750	Scleropages formosus	97.56	1e-50	161
LLPS-Bot-0405	Bos taurus	97.56	1e-50	161
LLPS-Gaa-1421	Gasterosteus aculeatus	97.56	1e-50	161
LLPS-Dio-1050	Dipodomys ordii	97.56	1e-50	161
LLPS-Tar-0618	Takifugu rubripes	97.56	1e-50	161
LLPS-Tut-0897	Tursiops truncatus	97.56	1e-50	161
LLPS-Xim-1327	Xiphophorus maculatus	97.56	1e-50	161
LLPS-Drm-0331	Drosophila melanogaster	97.56	2e-50	161
LLPS-Myl-0177	Myotis lucifugus	97.56	1e-50	161
LLPS-Ova-2058	Ovis aries	97.56	7e-51	162
LLPS-Mup-0089	Mustela putorius furo	97.56	1e-50	161
LLPS-Aim-0221	Ailuropoda melanoleuca	97.56	1e-50	161
LLPS-Paa-2406	Papio anubis	97.56	1e-50	161
LLPS-Mal-0719	Mandrillus leucophaeus	97.56	1e-50	161
LLPS-Ere-0135	Erinaceus europaeus	97.56	1e-50	161
LLPS-Ran-0020	Rattus norvegicus	97.56	1e-50	161
LLPS-Sus-0102	Sus scrofa	97.56	1e-50	161
LLPS-Sah-1507	Sarcophilus harrisii	97.56	1e-50	161
LLPS-Cea-2108	Cercocebus atys	97.56	1e-50	161
LLPS-Aon-0281	Aotus nancymaae	97.56	1e-50	161
LLPS-Orl-0563	Oryzias latipes	97.56	1e-50	161
LLPS-Ora-0027	Ornithorhynchus anatinus	97.56	1e-50	161
LLPS-Chs-1589	Chlorocebus sabaeus	97.56	1e-50	161
LLPS-Mum-0813	Mus musculus	97.56	1e-50	161
LLPS-Maf-2295	Macaca fascicularis	97.56	1e-50	161
LLPS-Mea-2792	Mesocricetus auratus	97.56	1e-50	161
LLPS-Caj-0194	Callithrix jacchus	97.56	1e-50	161
LLPS-Asm-0373	Astyanax mexicanus	97.56	1e-50	161
LLPS-Fud-1065	Fukomys damarensis	97.56	1e-50	161
LLPS-Gog-1638	Gorilla gorilla	97.56	1e-50	161
LLPS-Mam-1622	Macaca mulatta	97.56	1e-50	161
LLPS-Cap-0578	Cavia porcellus	97.56	1e-50	161
LLPS-Eqc-0619	Equus caballus	97.56	1e-50	161
LLPS-Ten-1565	Tetraodon nigroviridis	97.56	1e-50	161
LLPS-Caf-0576	Canis familiaris	97.56	1e-50	161
LLPS-Poa-0232	Pongo abelii	97.56	1e-50	161
LLPS-Tag-1576	Taeniopygia guttata	97.56	1e-50	161
LLPS-Nol-1078	Nomascus leucogenys	97.56	1e-50	161
LLPS-Anc-0833	Anolis carolinensis	97.56	1e-50	161
LLPS-Ict-0419	Ictidomys tridecemlineatus	97.56	1e-50	161
LLPS-Cas-0991	Carlito syrichta	97.56	1e-50	161
LLPS-Gaga-0704	Gallus gallus	97.56	1e-50	161
LLPS-Xet-0331	Xenopus tropicalis	97.56	1e-50	161
LLPS-Loa-1160	Loxodonta africana	97.56	1e-50	161
LLPS-Anp-1907	Anas platyrhynchos	97.56	1e-50	161
LLPS-Man-1523	Macaca nemestrina	97.56	1e-50	161
LLPS-Scm-1600	Scophthalmus maximus	97.56	1e-50	161
LLPS-Mod-0671	Monodelphis domestica	97.56	1e-50	161
LLPS-Fec-0807	Felis catus	97.56	1e-50	161
LLPS-Lac-0577	Latimeria chalumnae	97.56	1e-50	161
LLPS-Dar-0749	Danio rerio	97.56	1e-50	161
LLPS-Hos-1834	Homo sapiens	97.56	1e-50	161
LLPS-Meg-0377	Meleagris gallopavo	97.56	1e-50	161
LLPS-Urm-1433	Ursus maritimus	97.56	1e-50	161
LLPS-Pap-0724	Pan paniscus	97.56	1e-50	161
LLPS-Pat-2482	Pan troglodytes	97.56	1e-50	161
LLPS-Pof-0887	Poecilia formosa	97.56	1e-50	161
LLPS-Rhb-1128	Rhinopithecus bieti	97.56	1e-50	161
LLPS-Orn-0302	Oreochromis niloticus	97.56	1e-50	161
LLPS-Orc-0467	Oryctolagus cuniculus	97.56	1e-50	161
LLPS-Fia-1551	Ficedula albicollis	97.56	1e-50	161
LLPS-Pes-0421	Pelodiscus sinensis	97.56	9e-51	162
LLPS-Otg-0041	Otolemur garnettii	97.56	1e-50	161
LLPS-Chr-0974	Chlamydomonas reinhardtii	96.34	4e-49	157
LLPS-Cis-1193	Ciona savignyi	96.34	1e-50	166
LLPS-Cae-0458	Caenorhabditis elegans	96.34	7e-50	160
LLPS-Icp-2614	Ictalurus punctatus	96.34	9e-50	159
LLPS-Gas-0315	Galdieria sulphuraria	95.12	8e-49	157
LLPS-Abg-0180	Absidia glauca	93.9	3e-49	158
LLPS-Crn-0310	Cryptococcus neoformans	93.9	9e-49	157
LLPS-Cym-0453	Cyanidioschyzon merolae	93.9	2e-48	156
LLPS-Chc-0082	Chondrus crispus	92.68	1e-47	154
LLPS-Mel-0312	Melampsora laricipopulina	92.68	2e-48	156
LLPS-Put-0792	Puccinia triticina	92.68	2e-48	156
LLPS-Pug-0813	Puccinia graminis	92.68	2e-48	156
LLPS-Miv-0214	Microbotryum violaceum	92.59	3e-48	156
LLPS-Leo-2073	Lepisosteus oculatus	91.46	1e-46	151
LLPS-Aso-0946	Aspergillus oryzae	90.24	5e-47	152
LLPS-Blg-0369	Blumeria graminis	90.24	1e-46	151
LLPS-Kop-0192	Komagataella pastoris	90.24	7e-47	152
LLPS-Pyt-0724	Pyrenophora teres	90.24	4e-47	152
LLPS-Lem-0600	Leptosphaeria maculans	90.24	9e-47	155
LLPS-Zyt-0179	Zymoseptoria tritici	90.24	1e-46	151
LLPS-Tum-0275	Tuber melanosporum	90.24	1e-46	151
LLPS-Nec-1129	Neurospora crassa	90.24	1e-46	151
LLPS-Asf-0231	Aspergillus flavus	90.24	5e-47	152
LLPS-Scs-0272	Sclerotinia sclerotiorum	90.24	1e-46	151
LLPS-Asc-0569	Aspergillus clavatus	90.24	5e-47	152
LLPS-Gag-0133	Gaeumannomyces graminis	90.24	2e-46	151
LLPS-Fuv-0256	Fusarium verticillioides	90.24	1e-46	151
LLPS-Map-0042	Magnaporthe poae	90.24	2e-46	151
LLPS-Mao-0970	Magnaporthe oryzae	90.24	2e-46	151
LLPS-Coo-0359	Colletotrichum orbiculare	90.24	2e-46	151
LLPS-Asn-0905	Aspergillus nidulans	90.24	5e-47	152
LLPS-Asni-0398	Aspergillus niger	90.24	5e-47	152
LLPS-Fuo-0964	Fusarium oxysporum	90.24	1e-46	151
LLPS-Pytr-0504	Pyrenophora triticirepentis	90.24	4e-47	152
LLPS-Trv-0271	Trichoderma virens	90.24	2e-46	151
LLPS-Phn-0096	Phaeosphaeria nodorum	90.24	4e-47	152
LLPS-Cogr-0604	Colletotrichum graminicola	90.24	2e-46	151
LLPS-Dos-0092	Dothistroma septosporum	90.24	1e-46	151
LLPS-Asfu-0406	Aspergillus fumigatus	90.24	3e-47	154
LLPS-Ved-0497	Verticillium dahliae	90.24	2e-46	151
LLPS-Ast-0386	Aspergillus terreus	90.24	5e-47	152
LLPS-Fus-0272	Fusarium solani	90.24	8e-47	151
LLPS-Nef-0419	Neosartorya fischeri	90.24	5e-47	152
LLPS-Trr-0900	Trichoderma reesei	90.24	2e-46	151
LLPS-Cog-0657	Colletotrichum gloeosporioides	90.24	2e-46	151
LLPS-Sac-1159	Saccharomyces cerevisiae	89.02	4e-46	150
LLPS-Yal-0244	Yarrowia lipolytica	89.02	9e-46	149
LLPS-Asg-0515	Ashbya gossypii	89.02	5e-46	150
LLPS-Spr-0266	Sporisorium reilianum	89.02	6e-47	152
LLPS-Usm-0755	Ustilago maydis	89.02	6e-47	152
LLPS-Beb-0083	Beauveria bassiana	89.02	6e-46	149
LLPS-Scp-0833	Schizosaccharomyces pombe	87.8	6e-47	152
LLPS-Scj-0275	Schizosaccharomyces japonicus	87.8	9e-47	152
LLPS-Scc-0325	Schizosaccharomyces cryophilus	86.59	3e-46	150

LLPS-Org-0221

Protein Sequence

Nucleotide Sequence