• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Org-0106

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Ribosome biogenesis protein WDR12 homolog
Ensembl Gene: ORGLA07G0163400
Ensembl Protein: ORGLA07G0163400.1
Organism: Oryza glaberrima
Taxa ID: 4538
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nucleolus, Stress granulePredicted from orthologs(View)

▼ FUNCTION

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblORGLA07G0163400.1ORGLA07G0163400.1
UniProtI1QBZ2, I1QBZ2_ORYGL

▼ SEQUENCE

Protein Sequence (FASTA)
1     MDSGGASDPS  RQVRVRFVTK  LPAPLRAPPT  SIAVPADLTR  MGLSEIVNSL  LLAASPDHQA  60
61    QPFDFLVDGE  LVRLPLQEFL  LAKGISVERV  LELEYVKAVA  PRKQEDPCPH  DDWVSAVDGS  120
121   NPSFVLTGCY  DGLARIWRDA  SECTHILEGH  SDGITSARFI  NKGETEDRLH  VVTASKDRSL  180
181   RLFKFDTSVS  IPKQIGAYKI  LRGHTSSVQS  VAVDPSTNII  CSGSWDNSIK  LWSVEGSEED  240
241   GDTVSVKKRR  TNSVSSGPEE  SQFEGSATST  FLGHTQCVSA  VTWPERQTIY  SASWDHSVRQ  300
301   WDVQTGKETW  NMVSGKALNC  LDCGGESSSL  IAAGGSDPVL  RVWDPRKPGT  LAPIFQFSSH  360
361   KSWISACKWH  PSSWFHLVSS  SFDGKVMLWD  LRTAWPLASV  ETHKDKVLCA  DWWKGDSVIS  420
421   GGADSKLCIA  SGIEIV  436
Nucleotide CDS Sequence (FASTA)
1     ATGGACTCCG  GCGGCGCCTC  CGACCCCTCG  CGCCAGGTGC  GGGTGCGCTT  CGTGACGAAG  60
61    CTCCCCGCGC  CGCTGCGCGC  GCCGCCCACC  TCCATCGCCG  TCCCCGCCGA  CCTCACCCGC  120
121   ATGGGCCTCT  CTGAGATCGT  CAACAGCCTC  CTCCTCGCCG  CCTCCCCGGA  TCACCAGGCG  180
181   CAGCCCTTCG  ACTTCCTCGT  CGACGGTGAG  CTCGTGCGGC  TCCCGCTTCA  GGAGTTCCTC  240
241   CTCGCCAAGG  GCATCTCAGT  GGAGAGGGTG  CTTGAGCTTG  AATATGTGAA  AGCTGTGGCA  300
301   CCGAGGAAGC  AGGAGGATCC  ATGCCCGCAT  GATGACTGGG  TTAGCGCAGT  TGATGGATCA  360
361   AACCCGAGTT  TCGTATTAAC  AGGTTGCTAT  GATGGTCTTG  CAAGAATATG  GAGAGATGCA  420
421   TCTGAATGTA  CACATATTTT  GGAAGGACAT  AGTGACGGAA  TCACTTCTGC  TCGCTTCATT  480
481   AATAAAGGTG  AAACTGAAGA  CAGGCTGCAT  GTAGTCACTG  CATCAAAGGA  TAGGTCATTG  540
541   CGCTTATTCA  AGTTTGATAC  ATCAGTCAGT  ATTCCAAAGC  AAATTGGGGC  TTACAAAATT  600
601   CTCCGTGGCC  ACACATCATC  TGTTCAGAGT  GTTGCAGTAG  ACCCTTCCAC  GAACATAATA  660
661   TGTTCTGGTT  CCTGGGATAA  CTCAATTAAG  CTATGGTCAG  TCGAAGGGTC  GGAAGAAGAT  720
721   GGTGACACTG  TCTCAGTGAA  GAAGAGAAGG  ACAAATTCTG  TTTCATCTGG  ACCTGAAGAA  780
781   TCTCAGTTTG  AGGGTTCTGC  CACTTCAACA  TTTCTGGGAC  ATACGCAGTG  CGTTTCTGCT  840
841   GTTACCTGGC  CTGAGCGACA  AACAATATAT  TCAGCATCTT  GGGACCATTC  TGTTCGGCAG  900
901   TGGGATGTCC  AAACAGGGAA  AGAGACATGG  AATATGGTAT  CTGGGAAGGC  CTTGAATTGC  960
961   TTGGATTGTG  GTGGTGAGAG  CTCTTCACTA  ATCGCTGCTG  GTGGCTCTGA  CCCTGTCTTG  1020
1021  AGGGTATGGG  ACCCTCGTAA  ACCTGGAACT  CTAGCTCCAA  TTTTTCAGTT  TTCCTCCCAT  1080
1081  AAAAGCTGGA  TCAGTGCTTG  CAAGTGGCAT  CCAAGTTCGT  GGTTTCATTT  GGTATCATCT  1140
1141  TCATTTGATG  GGAAAGTAAT  GTTGTGGGAT  CTAAGGACAG  CATGGCCACT  GGCTTCTGTG  1200
1201  GAGACACACA  AAGACAAGGT  TTTATGTGCG  GACTGGTGGA  AAGGGGATAG  CGTCATCAGT  1260
1261  GGGGGAGCTG  ATTCCAAGCT  GTGTATAGCT  TCAGGGATTG  AAATAGTGTG  A  1311

▼ KEYWORD

ID
Family
Complete proteome
Nucleus
Reference proteome
Repeat
Ribosome biogenesis
rRNA processing
WD repeat

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Nucleolus
Cellular Component
Nucleoplasm
Cellular Component
Plasmodesma
Cellular Component
Preribosome, large subunit precursor
Molecular Function
Ribonucleoprotein complex binding
Biological Process
Maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process
Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Ors-0062Oryza sativa98.620.0 876
LLPS-Ori-0322Oryza indica98.620.0 876
LLPS-Orm-0216Oryza meridionalis98.390.0 879
LLPS-Orp-0892Oryza punctata96.560.0 860
LLPS-Orr-0209Oryza rufipogon95.870.0 840
LLPS-Orni-0383Oryza nivara95.870.0 840
LLPS-Lep-0291Leersia perrieri94.940.0 840
LLPS-Orbr-0168Oryza brachyantha91.760.0 819
LLPS-Orb-0619Oryza barthii87.160.0 743
LLPS-Orgl-0043Oryza glumaepatula86.70.0 738
LLPS-Sei-0747Setaria italica85.910.0 744
LLPS-Tra-1409Triticum aestivum84.950.0 761
LLPS-Tru-1109Triticum urartu84.920.0 702
LLPS-Brd-0745Brachypodium distachyon84.330.0 759
LLPS-Zem-0375Zea mays83.330.0 743
LLPS-Sob-0651Sorghum bicolor82.870.0 704
LLPS-Mua-0138Musa acuminata69.790.0 642
LLPS-Viv-0221Vitis vinifera66.970.0 617
LLPS-Mae-0048Manihot esculenta65.960.0 591
LLPS-Pot-1912Populus trichocarpa64.950.0 575
LLPS-Thc-0288Theobroma cacao64.30.0 587
LLPS-Gor-0900Gossypium raimondii64.250.0 576
LLPS-Sol-0672Solanum lycopersicum64.120.0 592
LLPS-Sot-0700Solanum tuberosum63.840.0 583
LLPS-Dac-0237Daucus carota63.450.0 576
LLPS-Coc-1123Corchorus capsularis63.390.0 570
LLPS-Nia-0337Nicotiana attenuata63.010.0 573
LLPS-Brr-2123Brassica rapa62.930.0 565
LLPS-Amt-1023Amborella trichopoda62.880.0 561
LLPS-Via-0010Vigna angularis62.850.0 573
LLPS-Arl-0458Arabidopsis lyrata62.790.0 580
LLPS-Art-0297Arabidopsis thaliana62.70.0 582
LLPS-Bro-2747Brassica oleracea62.70.0 562
LLPS-Hea-0538Helianthus annuus62.631e-175 505
LLPS-Glm-1726Glycine max62.470.0 574
LLPS-Phv-1125Phaseolus vulgaris62.010.0 566
LLPS-Vir-0455Vigna radiata61.560.0 569
LLPS-Prp-1315Prunus persica61.50.0 572
LLPS-Cus-0431Cucumis sativus61.380.0 559
LLPS-Met-0611Medicago truncatula60.780.0 559
LLPS-Php-1261Physcomitrella patens51.371e-150 442
LLPS-Sem-0471Selaginella moellendorffii49.35e-139 412
LLPS-Chr-0195Chlamydomonas reinhardtii37.311e-85 276
LLPS-Dos-0192Dothistroma septosporum36.591e-57 202
LLPS-Sah-1556Sarcophilus harrisii35.928e-68 228
LLPS-Ten-1230Tetraodon nigroviridis35.73e-66 224
LLPS-Icp-0489Ictalurus punctatus35.657e-71 236
LLPS-Tar-0177Takifugu rubripes35.652e-67 227
LLPS-Cap-1242Cavia porcellus35.563e-64 219
LLPS-Mod-0711Monodelphis domestica35.394e-66 224
LLPS-Aim-0379Ailuropoda melanoleuca35.342e-61 211
LLPS-Dar-0860Danio rerio35.172e-67 227
LLPS-Pof-1095Poecilia formosa35.178e-71 236
LLPS-Scm-0474Scophthalmus maximus35.173e-66 224
LLPS-Xet-0412Xenopus tropicalis35.171e-65 223
LLPS-Fud-1652Fukomys damarensis35.085e-63 216
LLPS-Myl-1006Myotis lucifugus35.083e-65 221
LLPS-Gaa-1257Gasterosteus aculeatus34.926e-74 244
LLPS-Osl-0068Ostreococcus lucimarinus34.896e-79 258
LLPS-Orc-1914Oryctolagus cuniculus34.842e-63 217
LLPS-Loa-0761Loxodonta africana34.844e-65 221
LLPS-Ict-0609Ictidomys tridecemlineatus34.845e-63 216
LLPS-Scf-1978Scleropages formosus34.749e-72 239
LLPS-Tag-1384Taeniopygia guttata34.672e-59 204
LLPS-Urm-0135Ursus maritimus34.619e-62 212
LLPS-Cas-1114Carlito syrichta34.611e-63 217
LLPS-Nol-1340Nomascus leucogenys34.612e-60 209
LLPS-Caj-0937Callithrix jacchus34.611e-61 212
LLPS-Mal-2207Mandrillus leucophaeus34.617e-62 213
LLPS-Ova-0076Ovis aries34.614e-65 221
LLPS-Anc-0498Anolis carolinensis34.452e-69 233
LLPS-Leo-0047Lepisosteus oculatus34.455e-73 242
LLPS-Meg-2446Meleagris gallopavo34.427e-65 221
LLPS-Otg-2054Otolemur garnettii34.373e-61 211
LLPS-Rhb-1579Rhinopithecus bieti34.371e-61 212
LLPS-Hos-1652Homo sapiens34.373e-62 214
LLPS-Fec-1914Felis catus34.371e-61 212
LLPS-Poa-2006Pongo abelii34.373e-62 213
LLPS-Chs-2284Chlorocebus sabaeus34.371e-61 212
LLPS-Sus-0793Sus scrofa34.372e-62 214
LLPS-Aon-0682Aotus nancymaae34.375e-61 210
LLPS-Mup-1717Mustela putorius furo34.371e-61 214
LLPS-Gaga-0362Gallus gallus34.215e-66 224
LLPS-Fia-0170Ficedula albicollis34.137e-51 181
LLPS-Anp-0556Anas platyrhynchos34.131e-58 203
LLPS-Eqc-2354Equus caballus34.132e-61 211
LLPS-Gog-2033Gorilla gorilla34.139e-62 212
LLPS-Bot-0154Bos taurus34.131e-62 214
LLPS-Orl-0026Oryzias latipes34.053e-73 243
LLPS-Ora-1084Ornithorhynchus anatinus34.042e-72 240
LLPS-Asm-0231Astyanax mexicanus33.973e-70 234
LLPS-Map-0831Magnaporthe poae33.938e-1886.3
LLPS-Xim-0049Xiphophorus maculatus33.814e-69 232
LLPS-Caf-1633Canis familiaris33.737e-62 213
LLPS-Ran-2801Rattus norvegicus33.733e-63 216
LLPS-Abg-0627Absidia glauca33.725e-72 239
LLPS-Orn-1207Oreochromis niloticus33.576e-62 213
LLPS-Mum-2280Mus musculus33.498e-64 218
LLPS-Pes-1162Pelodiscus sinensis33.414e-60 208
LLPS-Mea-1466Mesocricetus auratus33.336e-0652.4
LLPS-Cea-0817Cercocebus atys33.14e-53 189
LLPS-Paa-2015Papio anubis33.14e-53 189
LLPS-Man-0242Macaca nemestrina32.942e-55 195
LLPS-Pat-0600Pan troglodytes32.632e-53 190
LLPS-Pap-0450Pan paniscus32.634e-53 189
LLPS-Maf-1925Macaca fascicularis32.621e-53 190
LLPS-Cii-0990Ciona intestinalis32.512e-56 198
LLPS-Lem-0782Leptosphaeria maculans32.379e-46 176
LLPS-Dio-4269Dipodomys ordii31.757e-0652.0
LLPS-Nef-0052Neosartorya fischeri31.78e-52 187
LLPS-Asg-0250Ashbya gossypii31.694e-51 184
LLPS-Asn-0332Aspergillus nidulans31.353e-45 169
LLPS-Asf-0883Aspergillus flavus31.261e-46 173
LLPS-Aso-0655Aspergillus oryzae31.263e-47 174
LLPS-Lac-0289Latimeria chalumnae31.13e-43 160
LLPS-Tum-0423Tuber melanosporum31.084e-57 200
LLPS-Nec-0543Neurospora crassa30.994e-43 163
LLPS-Pyt-0858Pyrenophora teres30.56e-43 167
LLPS-Asni-0124Aspergillus niger30.492e-43 164
LLPS-Asc-0069Aspergillus clavatus30.435e-47 174
LLPS-Pytr-0919Pyrenophora triticirepentis30.284e-47 174
LLPS-Phn-0700Phaeosphaeria nodorum30.192e-45 169
LLPS-Asfu-0322Aspergillus fumigatus30.185e-49 179
LLPS-Zyt-0169Zymoseptoria tritici30.023e-44 166
LLPS-Sac-0246Saccharomyces cerevisiae29.754e-48 176
LLPS-Blg-0748Blumeria graminis29.556e-41 157
LLPS-Mao-0222Magnaporthe oryzae29.517e-44 165
LLPS-Scc-0261Schizosaccharomyces cryophilus29.486e-49 179
LLPS-Drm-0805Drosophila melanogaster29.292e-46 171
LLPS-Kop-0216Komagataella pastoris29.111e-48 177
LLPS-Scs-0055Sclerotinia sclerotiorum29.056e-45 168
LLPS-Scp-0670Schizosaccharomyces pombe29.055e-46 170
LLPS-Yal-0082Yarrowia lipolytica28.745e-37 146
LLPS-Ast-0232Aspergillus terreus28.471e-1890.1
LLPS-Cogr-0695Colletotrichum graminicola28.235e-42 160
LLPS-Scj-0253Schizosaccharomyces japonicus28.182e-42 160
LLPS-Fus-1246Fusarium solani27.652e-36 144
LLPS-Coo-1040Colletotrichum orbiculare27.633e-41 158
LLPS-Trv-0181Trichoderma virens27.53e-36 143
LLPS-Mam-1221Macaca mulatta27.453e-34 136
LLPS-Fuo-1004Fusarium oxysporum27.352e-33 135
LLPS-Trr-0222Trichoderma reesei27.164e-37 145
LLPS-Chc-0712Chondrus crispus27.146e-1168.9
LLPS-Beb-0837Beauveria bassiana27.078e-30 124
LLPS-Fuv-0092Fusarium verticillioides26.991e-32 132
LLPS-Crn-0226Cryptococcus neoformans26.973e-30 125
LLPS-Mel-0230Melampsora laricipopulina26.925e-41 157
LLPS-Put-0653Puccinia triticina26.862e-35 141
LLPS-Pug-0197Puccinia graminis26.441e-36 145
LLPS-Gas-0912Galdieria sulphuraria26.281e-1582.8
LLPS-Gag-0168Gaeumannomyces graminis26.067e-35 139
LLPS-Miv-0440Microbotryum violaceum26.033e-36 144
LLPS-Cae-1471Caenorhabditis elegans24.943e-30 125
LLPS-Spr-0363Sporisorium reilianum24.021e-21 100