• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Coo-1040
YTM1

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Ribosome biogenesis protein YTM1
Gene Name: YTM1, Cob_03145
Ensembl Gene: Cob_03145
Ensembl Protein: ENH88242
Organism: Colletotrichum orbiculare
Taxa ID: 1213857
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nucleolus, Stress granulePredicted from orthologs(View)

▼ FUNCTION

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblENH88242ENH88242
UniProtN4VW70, N4VW70_COLOR
GeneBankKB725665ENH88242.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MESSVAQVKV  NFTTTHDDLQ  LDESKRQLLV  PAEIKRYGLS  RILNSESMLN  TSAPVPLDFL  60
61    VNGTFLRTSL  EEYIQANGLS  IESTITLQYV  RSLLPPVYEA  SFEHDDWISA  VDVLSQTSRA  120
121   GRWSGDAFHQ  GKDRILSASY  DGLVRVWDGS  GQCLATAPSA  SGGGHSKSVT  DAKFLSNSQL  180
181   ASVGLDQKVV  VWKYAEPSDF  SGTLKPTLEL  HGHRKLINSL  DVHGPSGRLL  TASADGRVGL  240
241   WSANKKSAPD  VDADDIPATH  ASSVKRAKLS  NSSVTVPQRG  ALAMISAHDG  DLAAATAATF  300
301   HPTDATVAYS  ASTDRTLRTL  DLTTARVVST  LTTLHPLLCL  APMRGASSLV  AAGSAARHVT  360
361   LLDPRASAQA  TSVLTLRGHG  NMISALAPSP  DNEYSLASAS  HDGAVKIWDL  RSVRPATKDE  420
421   GGGGVCEAVY  SIGREWLRGK  KAPVGGEGVK  VFGLAWDQTW  GIVSGGEDKQ  LQINRGRDLF  480
481   ASS  483
Nucleotide CDS Sequence (FASTA)
1     ATGGAGTCCT  CGGTGGCCCA  GGTGAAGGTC  AACTTCACGA  CGACGCACGA  TGACCTCCAG  60
61    CTCGACGAGA  GCAAGAGGCA  ACTCCTCGTT  CCCGCAGAAA  TCAAGCGATA  TGGCCTGTCG  120
121   AGGATATTGA  ACTCCGAGTC  GATGCTCAAC  ACGTCGGCCC  CCGTACCGCT  CGACTTCCTC  180
181   GTCAACGGAA  CGTTCCTCCG  CACCTCGCTC  GAAGAATACA  TCCAGGCCAA  CGGGCTCTCG  240
241   ATCGAGTCGA  CAATCACGCT  GCAGTACGTG  CGCAGTCTGC  TGCCGCCCGT  GTACGAGGCC  300
301   TCGTTCGAGC  ACGACGACTG  GATCTCGGCC  GTCGACGTGC  TCTCGCAGAC  GTCGCGCGCG  360
361   GGCCGCTGGT  CCGGCGACGC  CTTCCACCAG  GGCAAGGACC  GCATCCTCTC  GGCCAGCTAC  420
421   GACGGCCTCG  TGCGCGTCTG  GGACGGCTCG  GGCCAGTGCC  TCGCGACGGC  GCCCTCGGCC  480
481   AGCGGCGGCG  GCCACTCAAA  GTCCGTCACG  GACGCCAAAT  TCCTCTCGAA  CTCGCAGCTC  540
541   GCCTCGGTCG  GGCTGGACCA  AAAGGTCGTC  GTGTGGAAGT  ACGCGGAACC  CAGCGACTTT  600
601   TCCGGCACCC  TCAAGCCCAC  GCTGGAACTC  CACGGGCACA  GGAAGCTCAT  CAACTCGCTC  660
661   GACGTCCACG  GGCCCTCGGG  CAGGCTCCTC  ACCGCCTCGG  CCGACGGCCG  CGTCGGCCTC  720
721   TGGTCCGCCA  ACAAGAAGTC  GGCGCCCGAC  GTCGACGCCG  ACGACATACC  CGCCACGCAC  780
781   GCCAGCAGCG  TCAAGCGCGC  CAAACTCTCC  AACTCGTCCG  TCACGGTGCC  GCAGAGGGGC  840
841   GCGCTCGCCA  TGATCTCCGC  CCACGACGGC  GACCTCGCCG  CCGCCACCGC  CGCCACCTTC  900
901   CACCCCACCG  ACGCCACCGT  CGCCTACTCG  GCCTCGACGG  ACCGCACCCT  GCGCACCCTC  960
961   GACCTCACCA  CGGCCCGCGT  CGTCTCGACC  CTCACGACGC  TCCACCCGCT  GCTCTGCCTC  1020
1021  GCGCCCATGC  GCGGCGCCTC  GTCGCTCGTC  GCCGCCGGCT  CCGCCGCCCG  CCACGTCACC  1080
1081  CTCCTCGACC  CCCGCGCCTC  GGCGCAGGCC  ACGTCGGTGC  TGACCCTCCG  CGGCCACGGC  1140
1141  AACATGATCT  CCGCGCTCGC  GCCCTCACCC  GACAACGAGT  ACAGCCTCGC  GTCCGCGTCG  1200
1201  CACGACGGCG  CCGTCAAGAT  CTGGGACCTG  AGGAGCGTGC  GGCCCGCCAC  AAAGGACGAG  1260
1261  GGCGGCGGCG  GCGTCTGCGA  GGCCGTCTAC  TCCATCGGCC  GCGAGTGGCT  CAGGGGCAAG  1320
1321  AAGGCGCCCG  TCGGCGGAGA  GGGCGTCAAG  GTGTTTGGGC  TGGCGTGGGA  TCAGACGTGG  1380
1381  GGCATCGTCA  GCGGCGGCGA  GGATAAACAG  CTGCAGATCA  ACAGGGGGAG  GGATTTGTTC  1440
1441  GCGTCGTCTT  AG  1452

▼ KEYWORD

ID
Family
Complete proteome
Nucleus
Reference proteome
Repeat
Ribosome biogenesis
rRNA processing
WD repeat

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Nucleolus
Cellular Component
Nucleoplasm
Cellular Component
Preribosome, large subunit precursor
Molecular Function
Ribonucleoprotein complex binding
Biological Process
Maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process
Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Cog-0522Colletotrichum gloeosporioides86.364e-85 267
LLPS-Cogr-0695Colletotrichum graminicola84.30.0 759
LLPS-Map-0831Magnaporthe poae66.031e-66 220
LLPS-Trv-0181Trichoderma virens64.180.0 551
LLPS-Trr-0222Trichoderma reesei63.770.0 551
LLPS-Fuo-1004Fusarium oxysporum63.730.0 544
LLPS-Fuv-0092Fusarium verticillioides63.10.0 539
LLPS-Nec-0543Neurospora crassa61.930.0 527
LLPS-Fus-1246Fusarium solani61.90.0 528
LLPS-Beb-0837Beauveria bassiana61.031e-166 486
LLPS-Mao-0222Magnaporthe oryzae58.634e-176 511
LLPS-Scs-0055Sclerotinia sclerotiorum55.913e-165 483
LLPS-Gag-0168Gaeumannomyces graminis55.282e-155 459
LLPS-Blg-0748Blumeria graminis54.766e-158 464
LLPS-Nef-0052Neosartorya fischeri51.141e-142 426
LLPS-Ast-0232Aspergillus terreus51.035e-79 256
LLPS-Aso-0655Aspergillus oryzae50.629e-141 421
LLPS-Asfu-0322Aspergillus fumigatus50.523e-142 425
LLPS-Asf-0883Aspergillus flavus50.414e-140 419
LLPS-Asc-0069Aspergillus clavatus50.17e-138 413
LLPS-Asn-0332Aspergillus nidulans49.799e-135 405
LLPS-Asni-0124Aspergillus niger47.724e-128 388
LLPS-Phn-0700Phaeosphaeria nodorum47.611e-117 360
LLPS-Pyt-0858Pyrenophora teres46.743e-97 324
LLPS-Pytr-0919Pyrenophora triticirepentis45.42e-109 339
LLPS-Lem-0782Leptosphaeria maculans45.34e-105 347
LLPS-Zyt-0169Zymoseptoria tritici42.863e-102 321
LLPS-Osl-0068Ostreococcus lucimarinus42.371e-0655.1
LLPS-Dos-0192Dothistroma septosporum41.839e-100 314
LLPS-Tum-0423Tuber melanosporum40.873e-86 278
LLPS-Spr-0481Sporisorium reilianum38.462e-0757.4
LLPS-Kop-0216Komagataella pastoris38.246e-85 275
LLPS-Asg-0250Ashbya gossypii37.963e-77 255
LLPS-Scj-0253Schizosaccharomyces japonicus37.192e-68 232
LLPS-Sac-0246Saccharomyces cerevisiae37.031e-73 246
LLPS-Yal-0082Yarrowia lipolytica36.412e-67 231
LLPS-Php-1767Physcomitrella patens36.291e-0655.1
LLPS-Scc-0261Schizosaccharomyces cryophilus35.495e-67 229
LLPS-Scp-0670Schizosaccharomyces pombe35.081e-68 232
LLPS-Abg-0627Absidia glauca34.072e-36 144
LLPS-Sem-1128Selaginella moellendorffii31.827e-0652.8
LLPS-Scf-0509Scleropages formosus31.451e-0552.4
LLPS-Usm-0221Ustilago maydis31.177e-22 102
LLPS-Sol-1786Solanum lycopersicum29.924e-25 111
LLPS-Put-0653Puccinia triticina29.922e-24 110
LLPS-Mel-0230Melampsora laricipopulina29.848e-35 140
LLPS-Art-0297Arabidopsis thaliana29.334e-23 105
LLPS-Bro-2747Brassica oleracea29.26e-22 101
LLPS-Brr-2123Brassica rapa29.25e-22 102
LLPS-Chr-0195Chlamydomonas reinhardtii29.184e-34 137
LLPS-Arl-0458Arabidopsis lyrata28.893e-22 102
LLPS-Brd-0745Brachypodium distachyon28.755e-29 122
LLPS-Mae-0048Manihot esculenta28.727e-30 124
LLPS-Viv-0221Vitis vinifera28.697e-33 134
LLPS-Glm-0530Glycine max28.376e-29 122
LLPS-Pug-0197Puccinia graminis28.166e-33 134
LLPS-Thc-0288Theobroma cacao27.997e-29 122
LLPS-Sot-0647Solanum tuberosum27.913e-24 108
LLPS-Zem-0375Zea mays27.894e-28 119
LLPS-Cii-0990Ciona intestinalis27.884e-1478.6
LLPS-Dar-0860Danio rerio27.762e-1582.8
LLPS-Crn-0226Cryptococcus neoformans27.74e-1478.6
LLPS-Miv-0440Microbotryum violaceum27.72e-23 107
LLPS-Nia-0337Nicotiana attenuata27.592e-22 103
LLPS-Dio-1531Dipodomys ordii27.497e-0858.5
LLPS-Tra-0708Triticum aestivum27.142e-29 123
LLPS-Via-0010Vigna angularis26.989e-31 128
LLPS-Vir-0455Vigna radiata26.982e-31 129
LLPS-Leo-0047Lepisosteus oculatus26.945e-2096.3
LLPS-Asm-0231Astyanax mexicanus26.941e-1789.4
LLPS-Sob-0651Sorghum bicolor26.864e-25 111
LLPS-Hea-0538Helianthus annuus26.844e-27 116
LLPS-Orgl-0043Oryza glumaepatula26.836e-1787.4
LLPS-Cus-0431Cucumis sativus26.755e-28 119
LLPS-Sei-0747Setaria italica26.754e-25 111
LLPS-Gaa-1257Gasterosteus aculeatus26.724e-28 119
LLPS-Orm-0216Oryza meridionalis26.655e-30 126
LLPS-Orb-0619Oryza barthii26.615e-1787.4
LLPS-Icp-0489Ictalurus punctatus26.539e-1580.5
LLPS-Anc-0498Anolis carolinensis26.533e-1684.7
LLPS-Lac-0289Latimeria chalumnae26.532e-1581.6
LLPS-Ori-0322Oryza indica26.52e-30 126
LLPS-Prp-1315Prunus persica26.56e-28 119
LLPS-Org-0106Oryza glaberrima26.53e-30 125
LLPS-Ors-0062Oryza sativa26.52e-30 126
LLPS-Orbr-0168Oryza brachyantha26.52e-28 120
LLPS-Tag-1384Taeniopygia guttata26.429e-1064.3
LLPS-Tru-1109Triticum urartu26.366e-26 112
LLPS-Phv-1125Phaseolus vulgaris26.272e-32 132
LLPS-Lep-0291Leersia perrieri26.191e-27 119
LLPS-Mua-0138Musa acuminata26.184e-25 111
LLPS-Pes-1162Pelodiscus sinensis26.122e-1169.7
LLPS-Tar-0177Takifugu rubripes26.11e-21 100
LLPS-Ten-1230Tetraodon nigroviridis26.18e-22 101
LLPS-Coc-1123Corchorus capsularis26.045e-27 116
LLPS-Orl-0026Oryzias latipes25.897e-27 115
LLPS-Scm-0474Scophthalmus maximus25.896e-2095.9
LLPS-Otg-2054Otolemur garnettii25.771e-1583.2
LLPS-Xim-0049Xiphophorus maculatus25.681e-25 112
LLPS-Loa-0761Loxodonta africana25.682e-1994.4
LLPS-Pof-1095Poecilia formosa25.686e-26 113
LLPS-Dac-0237Daucus carota25.676e-1890.1
LLPS-Orp-0892Oryza punctata25.673e-26 115
LLPS-Sah-1556Sarcophilus harrisii25.651e-1892.0
LLPS-Aim-0379Ailuropoda melanoleuca25.611e-1686.3
LLPS-Pot-1912Populus trichocarpa25.552e-26 114
LLPS-Anp-0556Anas platyrhynchos25.521e-0963.9
LLPS-Maf-1925Macaca fascicularis25.54e-0756.2
LLPS-Cap-1242Cavia porcellus25.474e-1890.5
LLPS-Mea-0043Mesocricetus auratus25.451e-1067.4
LLPS-Myl-1006Myotis lucifugus25.426e-2095.9
LLPS-Meg-2446Meleagris gallopavo25.392e-1067.0
LLPS-Orni-0383Oryza nivara25.318e-26 112
LLPS-Orr-0209Oryza rufipogon25.313e-25 111
LLPS-Bot-0154Bos taurus25.37e-1786.7
LLPS-Ova-0076Ovis aries25.35e-1993.2
LLPS-Sus-0793Sus scrofa25.261e-1892.0
LLPS-Ora-1084Ornithorhynchus anatinus25.267e-27 115
LLPS-Fud-1652Fukomys damarensis25.266e-1787.0
LLPS-Caf-1633Canis familiaris25.262e-1788.6
LLPS-Orn-1207Oreochromis niloticus25.266e-2199.0
LLPS-Orc-1914Oryctolagus cuniculus25.264e-1890.5
LLPS-Mup-1717Mustela putorius furo25.161e-1789.4
LLPS-Gor-0900Gossypium raimondii25.132e-25 112
LLPS-Ran-2801Rattus norvegicus25.058e-1889.7
LLPS-Mum-2280Mus musculus25.051e-1892.0
LLPS-Xet-0412Xenopus tropicalis25.053e-2096.7
LLPS-Cas-1114Carlito syrichta25.055e-1890.1
LLPS-Fec-1914Felis catus25.052e-1788.6
LLPS-Urm-0135Ursus maritimus25.051e-1789.0
LLPS-Gaga-0362Gallus gallus25.04e-1168.9
LLPS-Met-0611Medicago truncatula24.951e-27 119
LLPS-Aon-0682Aotus nancymaae24.952e-1788.6
LLPS-Caj-0937Callithrix jacchus24.952e-1788.6
LLPS-Mal-2207Mandrillus leucophaeus24.845e-1787.4
LLPS-Chs-2284Chlorocebus sabaeus24.844e-1787.4
LLPS-Gog-2033Gorilla gorilla24.847e-1992.8
LLPS-Eqc-2354Equus caballus24.842e-1788.2
LLPS-Poa-2006Pongo abelii24.844e-1890.5
LLPS-Nol-1340Nomascus leucogenys24.845e-1684.0
LLPS-Ict-0609Ictidomys tridecemlineatus24.846e-1787.0
LLPS-Mod-0711Monodelphis domestica24.847e-2198.6
LLPS-Hos-1652Homo sapiens24.845e-1890.1
LLPS-Rhb-1579Rhinopithecus bieti24.844e-1787.4
LLPS-Pap-0450Pan paniscus24.534e-1375.1
LLPS-Paa-2015Papio anubis24.223e-1375.5
LLPS-Cea-0817Cercocebus atys24.223e-1375.5
LLPS-Amt-1023Amborella trichopoda24.117e-2095.9
LLPS-Pat-0600Pan troglodytes23.834e-1375.5
LLPS-Man-0242Macaca nemestrina22.771e-1170.5
LLPS-Drm-0805Drosophila melanogaster21.893e-1582.0