DrLLPS - Data resource of LLPS

LLPS-Met-0957
11429365

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	DNA-directed RNA polymerase subunit
Gene Name:	11429365, MTR_5g030180
Ensembl Gene:	MTR_5g030180
Ensembl Protein:	KEH27707
Organism:	Medicago truncatula
Taxa ID:	3880
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Saccharomyces cerevisiae	LLPS-Sac-0107	Q04307	Client	Stress granule	53.45	1e-19	83.2

▼ FUNCTION

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	KEH27707	KEH27707
Ensembl	AES95848	AES95848
UniProt		A0A072UDK1, A0A072UDK1_MEDTR
GeneBank	CM001221	KEH27707.1
RefSeq	XM_013598222.1	XP_013453676.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MLVLPRQNIY RDQMEFCPMC GSMLMLELPN SSHDKFHPTR FYCLTCPYIC RIEKGVKIKR 60 61 RQMLVRKGID PIISHHEINK NKPKADVPCP NCRHPQASYH MQQTRSADEP ATIFYECLNE 120 121 KCGHKWKE 128
Nucleotide CDS Sequence (FASTA)
1 ATGTTAGTAT TACCAAGGCA AAATATTTAT AGAGACCAAA TGGAGTTTTG CCCTATGTGC 60 61 GGGAGCATGC TGATGCTTGA ACTACCCAAT TCGAGTCACG ACAAATTTCA TCCCACAAGG 120 121 TTTTATTGCC TCACTTGTCC ATATATTTGC CGAATCGAGA AAGGGGTTAA GATTAAGAGA 180 181 AGACAGATGC TGGTTAGGAA GGGGATTGAC CCTATTATCT CCCATCATGA GATCAACAAA 240 241 AATAAACCAA AAGCCGACGT ACCATGCCCA AATTGTCGCC ATCCTCAAGC TAGTTATCAC 300 301 ATGCAACAGA CTCGATCAGC TGATGAACCT GCAACAATAT TTTACGAGTG CTTGAATGAA 360 361 AAGTGTGGCC ACAAGTGGAA GGAGTGA 387

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0240	DNA-directed RNA polymerase
KW-0479	Metal-binding
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0804	Transcription
KW-0862	Zinc
KW-0863	Zinc-finger

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005730	Cellular Component	Nucleolus
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity
GO:0003676	Molecular Function	Nucleic acid binding
GO:0008270	Molecular Function	Zinc ion binding
GO:0006351	Biological Process	Transcription, DNA-templated

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Amt-1274	Amborella trichopoda	56.41	3e-07	49.3
LLPS-Pytr-0670	Pyrenophora triticirepentis	56.41	8e-08	51.6
LLPS-Pyt-0039	Pyrenophora teres	56.1	3e-08	52.8
LLPS-Phv-0759	Phaseolus vulgaris	55.65	2e-38	132
LLPS-Mel-0348	Melampsora laricipopulina	54.17	8e-09	54.3
LLPS-Phn-1460	Phaeosphaeria nodorum	53.85	6e-06	47.8
LLPS-Hea-1923	Helianthus annuus	53.85	5e-32	117
LLPS-Beb-0385	Beauveria bassiana	53.66	3e-07	51.6
LLPS-Prp-2409	Prunus persica	53.1	2e-35	124
LLPS-Viv-1962	Vitis vinifera	53.04	4e-36	126
LLPS-Scc-1070	Schizosaccharomyces cryophilus	52.5	3e-06	48.9
LLPS-Hov-0649	Hordeum vulgare	52.5	7e-06	46.6
LLPS-Fus-1193	Fusarium solani	52.38	2e-07	52.0
LLPS-Glm-2146	Glycine max	52.17	1e-35	125
LLPS-Trr-1306	Trichoderma reesei	51.22	2e-06	49.3
LLPS-Fuo-0751	Fusarium oxysporum	51.22	2e-06	49.7
LLPS-Trv-0800	Trichoderma virens	51.22	2e-06	49.3
LLPS-Fuv-0629	Fusarium verticillioides	51.22	1e-06	49.7
LLPS-Scs-0361	Sclerotinia sclerotiorum	51.22	8e-06	47.4
LLPS-Tra-2549	Triticum aestivum	51.22	6e-06	45.8
LLPS-Cus-2007	Cucumis sativus	50.43	2e-34	122
LLPS-Gor-1852	Gossypium raimondii	49.57	6e-33	117
LLPS-Pot-0255	Populus trichocarpa	49.57	2e-33	119
LLPS-Mae-1187	Manihot esculenta	49.57	2e-34	121
LLPS-Dos-0824	Dothistroma septosporum	48.72	2e-06	47.0
LLPS-Asg-0443	Ashbya gossypii	48.72	4e-06	46.6
LLPS-Sac-1076	Saccharomyces cerevisiae	48.72	7e-06	45.8
LLPS-Sol-1508	Solanum lycopersicum	48.7	2e-33	119
LLPS-Dac-1902	Daucus carota	48.28	8e-32	124
LLPS-Thc-1138	Theobroma cacao	47.86	2e-30	111
LLPS-Coc-1705	Corchorus capsularis	47.83	5e-32	115
LLPS-Nia-2036	Nicotiana attenuata	46.96	6e-33	117
LLPS-Sot-0996	Solanum tuberosum	46.96	2e-32	116
LLPS-Art-2620	Arabidopsis thaliana	44.35	2e-27	103
LLPS-Brr-2329	Brassica rapa	44.35	7e-28	104
LLPS-Mod-3834	Monodelphis domestica	43.55	8e-12	66.2
LLPS-Bro-0922	Brassica oleracea	43.48	9e-28	104
LLPS-Brn-2317	Brassica napus	43.48	9e-28	104
LLPS-Ors-2052	Oryza sativa	42.61	2e-26	101
LLPS-Orm-0337	Oryza meridionalis	42.61	3e-25	97.8
LLPS-Orr-0491	Oryza rufipogon	42.61	2e-24	98.6
LLPS-Org-1377	Oryza glaberrima	42.61	2e-26	101
LLPS-Ori-2227	Oryza indica	42.61	3e-25	97.8
LLPS-Orb-2108	Oryza barthii	42.61	3e-25	97.8
LLPS-Orni-1376	Oryza nivara	42.61	3e-25	97.8
LLPS-Mua-1037	Musa acuminata	42.61	1e-25	99.0
LLPS-Arl-1571	Arabidopsis lyrata	42.61	6e-27	102
LLPS-Drm-1801	Drosophila melanogaster	41.86	7e-06	45.8
LLPS-Orp-0606	Oryza punctata	41.74	2e-23	93.2
LLPS-Sob-0251	Sorghum bicolor	41.74	3e-25	98.2
LLPS-Zem-1490	Zea mays	41.74	8e-24	94.4
LLPS-Sei-0593	Setaria italica	41.74	8e-25	97.1
LLPS-Crn-0550	Cryptococcus neoformans	40.87	4e-19	82.0
LLPS-Cis-1188	Ciona savignyi	40.71	2e-22	90.5
LLPS-Lem-0347	Leptosphaeria maculans	40.66	1e-12	64.3
LLPS-Pug-0009	Puccinia graminis	40.0	6e-09	54.7
LLPS-Usm-1139	Ustilago maydis	40.0	5e-22	89.7
LLPS-Spr-0783	Sporisorium reilianum	40.0	8e-22	89.0
LLPS-Php-2030	Physcomitrella patens	40.0	3e-23	92.8
LLPS-Chr-1518	Chlamydomonas reinhardtii	40.0	7e-24	94.7
LLPS-Pap-1529	Pan paniscus	39.82	5e-22	89.7
LLPS-Pat-0056	Pan troglodytes	39.82	5e-22	89.7
LLPS-Rhb-3705	Rhinopithecus bieti	39.82	5e-22	89.7
LLPS-Cap-4319	Cavia porcellus	39.82	4e-22	89.7
LLPS-Mam-4595	Macaca mulatta	39.82	5e-22	89.7
LLPS-Nol-2139	Nomascus leucogenys	39.82	5e-22	89.7
LLPS-Chs-0174	Chlorocebus sabaeus	39.82	5e-22	89.7
LLPS-Mea-3991	Mesocricetus auratus	39.82	4e-22	89.7
LLPS-Mum-4923	Mus musculus	39.82	5e-22	89.7
LLPS-Maf-4678	Macaca fascicularis	39.82	5e-22	89.7
LLPS-Aon-4787	Aotus nancymaae	39.82	5e-22	89.7
LLPS-Cea-3977	Cercocebus atys	39.82	5e-22	89.7
LLPS-Sus-2520	Sus scrofa	39.82	5e-22	89.7
LLPS-Gog-0955	Gorilla gorilla	39.82	5e-22	89.7
LLPS-Caj-4162	Callithrix jacchus	39.82	5e-22	89.7
LLPS-Ran-2976	Rattus norvegicus	39.82	5e-22	89.7
LLPS-Myl-4342	Myotis lucifugus	39.82	5e-22	89.7
LLPS-Mal-1254	Mandrillus leucophaeus	39.82	5e-22	89.7
LLPS-Paa-3767	Papio anubis	39.82	5e-22	89.7
LLPS-Orbr-1137	Oryza brachyantha	39.13	2e-23	93.2
LLPS-Fec-0027	Felis catus	38.94	4e-21	87.0
LLPS-Hos-3865	Homo sapiens	38.94	4e-21	87.0
LLPS-Dar-1095	Danio rerio	38.94	4e-21	87.0
LLPS-Loa-3720	Loxodonta africana	38.94	2e-20	85.5
LLPS-Otg-1787	Otolemur garnettii	38.94	2e-21	87.8
LLPS-Orc-3132	Oryctolagus cuniculus	38.94	5e-21	87.0
LLPS-Eqc-2533	Equus caballus	38.94	3e-21	87.8
LLPS-Caf-3413	Canis familiaris	38.94	4e-21	87.0
LLPS-Gaga-1358	Gallus gallus	38.94	5e-22	89.7
LLPS-Ict-4632	Ictidomys tridecemlineatus	38.94	7e-22	89.4
LLPS-Cii-1170	Ciona intestinalis	38.94	6e-21	86.7
LLPS-Leo-3880	Lepisosteus oculatus	38.94	4e-21	87.4
LLPS-Fud-0358	Fukomys damarensis	38.94	2e-21	88.2
LLPS-Tut-2432	Tursiops truncatus	38.94	7e-22	89.4
LLPS-Bot-4673	Bos taurus	38.94	7e-22	89.4
LLPS-Aim-1058	Ailuropoda melanoleuca	38.94	3e-21	87.8
LLPS-Pes-3643	Pelodiscus sinensis	38.46	6e-17	75.9
LLPS-Fia-3276	Ficedula albicollis	38.39	8e-21	86.7
LLPS-Ova-0011	Ovis aries	38.39	2e-20	85.5
LLPS-Pof-3455	Poecilia formosa	38.05	2e-20	85.5
LLPS-Orn-0085	Oreochromis niloticus	38.05	3e-20	85.1
LLPS-Ten-2094	Tetraodon nigroviridis	38.05	2e-20	85.5
LLPS-Icp-4043	Ictalurus punctatus	38.05	7e-21	86.7
LLPS-Asm-0772	Astyanax mexicanus	38.05	5e-20	84.3
LLPS-Xim-1962	Xiphophorus maculatus	38.05	2e-20	85.1
LLPS-Scf-3035	Scleropages formosus	38.05	3e-21	87.4
LLPS-Gas-0170	Galdieria sulphuraria	37.93	4e-16	73.9
LLPS-Sem-1556	Selaginella moellendorffii	37.39	6e-19	81.6
LLPS-Cae-1738	Caenorhabditis elegans	37.39	5e-19	81.6
LLPS-Scm-3466	Scophthalmus maximus	37.17	1e-18	80.9
LLPS-Xet-3849	Xenopus tropicalis	37.17	2e-20	85.5
LLPS-Tar-3823	Takifugu rubripes	37.17	3e-19	82.4
LLPS-Lac-3987	Latimeria chalumnae	36.28	3e-19	82.4
LLPS-Poa-4532	Pongo abelii	36.28	4e-15	70.9
LLPS-Orl-0436	Oryzias latipes	36.28	2e-19	82.8
LLPS-Gaa-3900	Gasterosteus aculeatus	36.28	6e-18	79.0
LLPS-Ora-2590	Ornithorhynchus anatinus	36.11	1e-10	58.2
LLPS-Abg-0909	Absidia glauca	36.0	4e-16	73.9
LLPS-Kop-1348	Komagataella pastoris	35.9	2e-13	66.6
LLPS-Orgl-2302	Oryza glumaepatula	35.56	4e-23	93.2
LLPS-Miv-1027	Microbotryum violaceum	35.34	1e-15	72.8
LLPS-Osl-0301	Ostreococcus lucimarinus	35.09	2e-06	47.8
LLPS-Blg-0919	Blumeria graminis	35.04	5e-13	65.9
LLPS-Yal-1321	Yarrowia lipolytica	34.48	5e-15	71.2
LLPS-Mao-0037	Magnaporthe oryzae	33.91	5e-13	65.9
LLPS-Map-0522	Magnaporthe poae	33.91	2e-12	64.3
LLPS-Nec-0992	Neurospora crassa	33.91	1e-12	64.7
LLPS-Cas-0016	Carlito syrichta	33.63	8e-13	65.1
LLPS-Put-0231	Puccinia triticina	33.33	1e-09	57.0
LLPS-Tum-1406	Tuber melanosporum	33.04	3e-13	66.2
LLPS-Cym-0285	Cyanidioschyzon merolae	32.93	4e-06	48.5
LLPS-Scj-1593	Schizosaccharomyces japonicus	32.48	5e-16	73.9
LLPS-Coo-0588	Colletotrichum orbiculare	32.46	4e-11	60.5
LLPS-Aso-1260	Aspergillus oryzae	31.67	1e-09	56.6
LLPS-Asf-0835	Aspergillus flavus	31.67	1e-09	56.6
LLPS-Scp-1643	Schizosaccharomyces pombe	31.62	8e-13	65.1
LLPS-Cogr-0149	Colletotrichum graminicola	31.58	6e-08	51.6
LLPS-Asc-0650	Aspergillus clavatus	31.36	2e-11	61.2
LLPS-Zyt-0866	Zymoseptoria tritici	31.06	3e-11	61.6
LLPS-Man-2498	Macaca nemestrina	30.97	5e-11	60.1
LLPS-Sah-0333	Sarcophilus harrisii	30.91	5e-06	46.2
LLPS-Cog-0683	Colletotrichum gloeosporioides	30.7	3e-07	49.7
LLPS-Asfu-1388	Aspergillus fumigatus	30.51	4e-10	57.8
LLPS-Nef-1657	Neosartorya fischeri	30.43	5e-09	54.7
LLPS-Brd-0507	Brachypodium distachyon	29.84	6e-08	51.6
LLPS-Asni-0972	Aspergillus niger	29.41	1e-08	53.5
LLPS-Ere-0088	Erinaceus europaeus	29.2	9e-08	51.2
LLPS-Dio-2395	Dipodomys ordii	28.83	2e-07	50.4
LLPS-Mup-0417	Mustela putorius furo	27.87	4e-07	49.3
LLPS-Anc-2604	Anolis carolinensis	27.43	1e-06	47.8

LLPS-Met-095711429365

Protein Sequence

Nucleotide Sequence

LLPS-Met-0957
11429365