LLPS-Chr-0655
COPD1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Coatomer subunit delta |
| Gene Name: | COPD1, CHLRE_02g089100v5, CHLREDRAFT_195439 |
| Ensembl Gene: | CHLRE_02g089100v5 |
| Ensembl Protein: | PNW86500 |
| Organism: | Chlamydomonas reinhardtii |
| Taxa ID: | 3055 |
| LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, P-body | Predicted from orthologs | (View) |
▼ FUNCTION
| The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNW86500 | PNW86500 |
| UniProt | A8I901, A8I901_CHLRE | |
| GeneBank | CM008963, DS496114 | PNW86500.1, EDP06738.1 |
| RefSeq | XM_001701711.1 | XP_001701763.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MVVLAASIVS KTGKPLVSRQ YMEMSRIRIE GLLAAFPKLV GTGKQHTYVE TENVRYIYQP 60 61 MEGLYLLLIT NKQSNILEDL ETLRLLSKLV PEFSQSLEEE SVAGKAFELI FAFDEVISLG 120 121 HKENITVQQV KQNCEMESHE EKLHKLIIQS KINDTKDIMK KKAADIEKSK MEQKKIGLGN 180 181 ALTGFGSKAA SSILADLEPT PQYRPEPVPV PSVRPVAPVG GPKGPSKGMQ LGKAKKANDF 240 241 LESLAKEGEV VEIEVPKPTG GVSAVTVNAA TDPVSLAIEE KLSVTLNKQG GVENLEVQGT 300 301 MSLVVNTDEE AFIRIAVTSG ANKGFQFKTH PNIDKTLYSS SNVLGLKDPA RPFPTGSELG 360 361 VLKWRFQTKE ENLVPLSINC WPSVSGGESY VNIEYESTSD LDLQNVQIII PVPATGHAPT 420 421 VNQVDGEWRY DSRRGALIWT IELIDDTNRS GSMEFVTSAA DAEAFYPVEV AFTSNKTFCD 480 481 VAVASVEHTQ RGGPVKFSMK KQLETAEYSV V 511 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGTGGTGC TAGCTGCTTC CATCGTCTCC AAGACGGGGA AACCCCTCGT CTCGCGCCAG 60 61 TACATGGAGA TGAGCAGGAT CAGGATTGAA GGCCTGCTTG CTGCTTTCCC AAAGCTGGTG 120 121 GGGACAGGCA AGCAGCACAC CTATGTGGAG ACGGAGAATG TGCGCTACAT TTACCAGCCC 180 181 ATGGAGGGGC TGTACCTCCT GCTTATCACG AATAAGCAGA GCAACATCTT GGAGGACCTG 240 241 GAGACCCTGC GCCTGCTCAG CAAGCTGGTG CCGGAATTCA GCCAGAGCCT GGAGGAGGAG 300 301 TCAGTAGCGG GGAAAGCTTT CGAGCTCATT TTTGCGTTCG ACGAAGTCAT ATCACTCGGG 360 361 CATAAGGAGA ACATCACCGT GCAGCAGGTC AAGCAGAACT GCGAAATGGA GAGCCACGAG 420 421 GAGAAGCTGC ACAAGCTGAT CATTCAGAGC AAGATTAACG ACACTAAGGA CATTATGAAG 480 481 AAGAAGGCAG CGGACATTGA GAAGTCCAAA ATGGAGCAGA AGAAGATCGG GCTGGGCAAC 540 541 GCGCTCACAG GGTTTGGAAG CAAGGCGGCC AGCTCTATCC TCGCGGACCT GGAGCCCACC 600 601 CCCCAGTACC GGCCAGAGCC GGTGCCGGTG CCCAGCGTGC GGCCCGTGGC GCCCGTTGGC 660 661 GGGCCCAAGG GTCCGTCAAA GGGTATGCAG CTGGGCAAGG CCAAGAAGGC CAACGACTTC 720 721 CTGGAGAGCC TGGCGAAGGA GGGCGAGGTG GTGGAGATCG AGGTGCCGAA GCCCACGGGC 780 781 GGCGTGTCGG CGGTGACCGT GAACGCCGCC ACGGACCCGG TGTCGCTGGC CATCGAGGAG 840 841 AAGCTGTCGG TGACGCTCAA CAAGCAGGGC GGTGTGGAGA ACCTGGAGGT GCAGGGTACC 900 901 ATGTCGCTGG TGGTGAACAC GGACGAGGAG GCCTTCATCC GCATCGCCGT CACCAGCGGC 960 961 GCCAACAAGG GCTTCCAGTT CAAGACGCAC CCCAACATCG ACAAGACCCT GTACAGCAGC 1020 1021 TCCAACGTGC TGGGGCTCAA GGACCCCGCG CGGCCCTTCC CCACCGGCTC GGAGCTGGGC 1080 1081 GTCCTCAAGT GGCGCTTCCA GACCAAGGAG GAGAACCTGG TGCCGCTGTC CATCAACTGC 1140 1141 TGGCCCAGCG TGTCGGGCGG CGAGTCGTAC GTCAACATCG AGTACGAGTC CACCTCGGAC 1200 1201 CTGGACCTAC AGAACGTGCA GATCATCATC CCCGTCCCCG CCACTGGGCA CGCGCCCACC 1260 1261 GTCAACCAGG TGGACGGCGA GTGGCGGTAC GACTCGCGGC GCGGGGCGCT CATCTGGACC 1320 1321 ATCGAGCTCA TCGACGACAC CAACCGCAGC GGCTCCATGG AGTTCGTCAC GTCGGCGGCG 1380 1381 GACGCGGAGG CCTTCTACCC CGTGGAGGTG GCCTTCACCT CCAACAAGAC CTTCTGCGAC 1440 1441 GTGGCCGTGG CCAGCGTGGA GCACACGCAG CGCGGCGGGC CGGTGAAGTT CTCGATGAAG 1500 1501 AAGCAGCTCG AGACTGCGGA GTACAGCGTG GTGTAA 1536 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | COPI vesicle coat | |
Cellular Component | COPI-coated vesicle | |
Cellular Component | Cytosol | |
Cellular Component | Golgi membrane | |
Cellular Component | Plasmodesma | |
Biological Process | Endoplasmic reticulum to Golgi vesicle-mediated transport | |
Biological Process | Golgi localization | |
Biological Process | Protein transport | |
Biological Process | Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Vir-0272 | Vigna radiata | 87.64 | 4e-43 | 163 |
| LLPS-Nol-3220 | Nomascus leucogenys | 70.33 | 4e-35 | 141 |
| LLPS-Osl-0285 | Ostreococcus lucimarinus | 67.1 | 6e-64 | 220 |
| LLPS-Php-2539 | Physcomitrella patens | 62.64 | 0.0 | 644 |
| LLPS-Chc-1143 | Chondrus crispus | 62.18 | 1e-54 | 199 |
| LLPS-Anp-2126 | Anas platyrhynchos | 60.27 | 1e-58 | 197 |
| LLPS-Coc-1040 | Corchorus capsularis | 57.23 | 0.0 | 571 |
| LLPS-Prp-0561 | Prunus persica | 57.14 | 0.0 | 611 |
| LLPS-Viv-1086 | Vitis vinifera | 57.14 | 0.0 | 597 |
| LLPS-Mae-1034 | Manihot esculenta | 56.9 | 0.0 | 595 |
| LLPS-Dac-1206 | Daucus carota | 56.82 | 0.0 | 603 |
| LLPS-Amt-1688 | Amborella trichopoda | 56.4 | 0.0 | 597 |
| LLPS-Sol-1778 | Solanum lycopersicum | 56.36 | 0.0 | 591 |
| LLPS-Cus-0709 | Cucumis sativus | 56.31 | 0.0 | 601 |
| LLPS-Glm-1846 | Glycine max | 56.2 | 0.0 | 589 |
| LLPS-Phv-1395 | Phaseolus vulgaris | 55.83 | 0.0 | 584 |
| LLPS-Via-1854 | Vigna angularis | 55.72 | 0.0 | 583 |
| LLPS-Sei-0946 | Setaria italica | 55.68 | 0.0 | 573 |
| LLPS-Thc-0800 | Theobroma cacao | 55.64 | 0.0 | 590 |
| LLPS-Orbr-1249 | Oryza brachyantha | 55.62 | 0.0 | 582 |
| LLPS-Hea-1232 | Helianthus annuus | 55.53 | 0.0 | 595 |
| LLPS-Gor-1498 | Gossypium raimondii | 55.47 | 0.0 | 593 |
| LLPS-Orb-0539 | Oryza barthii | 55.43 | 0.0 | 583 |
| LLPS-Ori-0649 | Oryza indica | 55.34 | 0.0 | 580 |
| LLPS-Sem-1250 | Selaginella moellendorffii | 55.34 | 0.0 | 586 |
| LLPS-Orni-0353 | Oryza nivara | 55.34 | 0.0 | 579 |
| LLPS-Ors-0508 | Oryza sativa | 55.05 | 0.0 | 579 |
| LLPS-Sob-0028 | Sorghum bicolor | 54.96 | 0.0 | 572 |
| LLPS-Orp-1482 | Oryza punctata | 54.86 | 0.0 | 578 |
| LLPS-Nia-2346 | Nicotiana attenuata | 54.6 | 0.0 | 584 |
| LLPS-Brd-0080 | Brachypodium distachyon | 54.58 | 0.0 | 568 |
| LLPS-Zem-0866 | Zea mays | 54.58 | 0.0 | 575 |
| LLPS-Tru-0969 | Triticum urartu | 54.42 | 0.0 | 536 |
| LLPS-Org-2113 | Oryza glaberrima | 54.36 | 0.0 | 541 |
| LLPS-Orr-0766 | Oryza rufipogon | 54.29 | 0.0 | 563 |
| LLPS-Lep-1612 | Leersia perrieri | 54.25 | 0.0 | 562 |
| LLPS-Met-0695 | Medicago truncatula | 54.24 | 0.0 | 580 |
| LLPS-Tra-2206 | Triticum aestivum | 53.82 | 0.0 | 565 |
| LLPS-Hov-0706 | Hordeum vulgare | 53.82 | 0.0 | 558 |
| LLPS-Orm-0590 | Oryza meridionalis | 53.82 | 0.0 | 562 |
| LLPS-Brr-1601 | Brassica rapa | 53.57 | 0.0 | 537 |
| LLPS-Pot-0367 | Populus trichocarpa | 53.11 | 0.0 | 563 |
| LLPS-Mua-2095 | Musa acuminata | 53.0 | 0.0 | 561 |
| LLPS-Sot-0506 | Solanum tuberosum | 52.58 | 0.0 | 577 |
| LLPS-Leo-0425 | Lepisosteus oculatus | 52.54 | 1e-62 | 216 |
| LLPS-Bro-0476 | Brassica oleracea | 52.32 | 0.0 | 546 |
| LLPS-Brn-0526 | Brassica napus | 52.04 | 0.0 | 545 |
| LLPS-Orgl-0092 | Oryza glumaepatula | 51.34 | 1e-176 | 523 |
| LLPS-Art-0026 | Arabidopsis thaliana | 51.12 | 0.0 | 538 |
| LLPS-Arl-0230 | Arabidopsis lyrata | 50.93 | 0.0 | 534 |
| LLPS-Crn-0447 | Cryptococcus neoformans | 50.3 | 4e-51 | 181 |
| LLPS-Scp-0650 | Schizosaccharomyces pombe | 46.67 | 1e-49 | 176 |
| LLPS-Kop-0102 | Komagataella pastoris | 44.32 | 1e-42 | 165 |
| LLPS-Aon-1656 | Aotus nancymaae | 43.35 | 2e-148 | 444 |
| LLPS-Ict-0668 | Ictidomys tridecemlineatus | 43.35 | 2e-149 | 444 |
| LLPS-Fud-3351 | Fukomys damarensis | 43.33 | 4e-150 | 446 |
| LLPS-Dio-2128 | Dipodomys ordii | 43.27 | 3e-150 | 447 |
| LLPS-Chs-3433 | Chlorocebus sabaeus | 43.27 | 6e-150 | 446 |
| LLPS-Orc-2833 | Oryctolagus cuniculus | 43.27 | 1e-149 | 445 |
| LLPS-Paa-4116 | Papio anubis | 43.16 | 2e-148 | 444 |
| LLPS-Mal-2969 | Mandrillus leucophaeus | 43.16 | 2e-148 | 444 |
| LLPS-Cea-2614 | Cercocebus atys | 43.16 | 2e-148 | 444 |
| LLPS-Eqc-3845 | Equus caballus | 43.16 | 8e-149 | 444 |
| LLPS-Pap-3178 | Pan paniscus | 43.16 | 2e-148 | 444 |
| LLPS-Rhb-3429 | Rhinopithecus bieti | 43.16 | 1e-148 | 444 |
| LLPS-Gaa-0001 | Gasterosteus aculeatus | 43.11 | 2e-151 | 450 |
| LLPS-Mup-1132 | Mustela putorius furo | 43.08 | 2e-149 | 445 |
| LLPS-Ran-0847 | Rattus norvegicus | 43.08 | 3e-149 | 444 |
| LLPS-Mum-4448 | Mus musculus | 43.08 | 4e-149 | 444 |
| LLPS-Caf-0143 | Canis familiaris | 43.08 | 2e-149 | 445 |
| LLPS-Loa-3314 | Loxodonta africana | 43.08 | 3e-150 | 447 |
| LLPS-Cap-2572 | Cavia porcellus | 42.99 | 1e-150 | 448 |
| LLPS-Maf-2388 | Macaca fascicularis | 42.97 | 8e-148 | 442 |
| LLPS-Bot-2330 | Bos taurus | 42.94 | 3e-150 | 447 |
| LLPS-Ova-1870 | Ovis aries | 42.94 | 5e-150 | 446 |
| LLPS-Cas-0354 | Carlito syrichta | 42.94 | 4e-148 | 442 |
| LLPS-Fia-3274 | Ficedula albicollis | 42.94 | 1e-149 | 445 |
| LLPS-Mam-2151 | Macaca mulatta | 42.88 | 3e-145 | 436 |
| LLPS-Ora-2470 | Ornithorhynchus anatinus | 42.86 | 4e-148 | 441 |
| LLPS-Meg-2582 | Meleagris gallopavo | 42.83 | 4e-150 | 446 |
| LLPS-Sah-1829 | Sarcophilus harrisii | 42.8 | 1e-150 | 448 |
| LLPS-Gaga-2234 | Gallus gallus | 42.75 | 4e-150 | 446 |
| LLPS-Fec-2354 | Felis catus | 42.75 | 9e-148 | 442 |
| LLPS-Pes-2246 | Pelodiscus sinensis | 42.75 | 4e-148 | 441 |
| LLPS-Caj-0626 | Callithrix jacchus | 42.72 | 1e-145 | 436 |
| LLPS-Otg-2638 | Otolemur garnettii | 42.64 | 7e-150 | 446 |
| LLPS-Myl-1568 | Myotis lucifugus | 42.61 | 7e-149 | 443 |
| LLPS-Spr-0799 | Sporisorium reilianum | 42.57 | 8e-55 | 199 |
| LLPS-Hos-3067 | Homo sapiens | 42.5 | 4e-148 | 443 |
| LLPS-Ten-0971 | Tetraodon nigroviridis | 42.45 | 3e-151 | 449 |
| LLPS-Mod-3759 | Monodelphis domestica | 42.39 | 6e-151 | 449 |
| LLPS-Pof-3343 | Poecilia formosa | 42.39 | 1e-149 | 445 |
| LLPS-Aim-1829 | Ailuropoda melanoleuca | 42.33 | 6e-148 | 441 |
| LLPS-Sus-0832 | Sus scrofa | 42.33 | 1e-146 | 438 |
| LLPS-Gog-0258 | Gorilla gorilla | 42.31 | 5e-148 | 442 |
| LLPS-Pat-3871 | Pan troglodytes | 42.31 | 5e-148 | 442 |
| LLPS-Tut-1571 | Tursiops truncatus | 42.25 | 2e-145 | 434 |
| LLPS-Tar-1064 | Takifugu rubripes | 42.1 | 5e-150 | 446 |
| LLPS-Orn-0683 | Oreochromis niloticus | 42.1 | 4e-149 | 444 |
| LLPS-Scf-1398 | Scleropages formosus | 42.07 | 2e-147 | 439 |
| LLPS-Anc-0271 | Anolis carolinensis | 41.94 | 6e-144 | 432 |
| LLPS-Orl-1932 | Oryzias latipes | 41.87 | 2e-145 | 434 |
| LLPS-Asm-2282 | Astyanax mexicanus | 41.86 | 1e-149 | 446 |
| LLPS-Scj-0823 | Schizosaccharomyces japonicus | 41.84 | 8e-55 | 190 |
| LLPS-Urm-3139 | Ursus maritimus | 41.82 | 4e-137 | 412 |
| LLPS-Man-1552 | Macaca nemestrina | 41.81 | 1e-134 | 408 |
| LLPS-Scm-3153 | Scophthalmus maximus | 41.76 | 1e-149 | 446 |
| LLPS-Icp-0069 | Ictalurus punctatus | 41.7 | 3e-147 | 439 |
| LLPS-Xim-1974 | Xiphophorus maculatus | 41.67 | 6e-147 | 438 |
| LLPS-Dar-3045 | Danio rerio | 41.63 | 5e-145 | 433 |
| LLPS-Lac-1528 | Latimeria chalumnae | 41.54 | 3e-138 | 415 |
| LLPS-Sac-0965 | Saccharomyces cerevisiae | 41.48 | 4e-39 | 154 |
| LLPS-Cis-1418 | Ciona savignyi | 41.22 | 1e-134 | 407 |
| LLPS-Xet-2611 | Xenopus tropicalis | 41.18 | 2e-142 | 427 |
| LLPS-Gas-0998 | Galdieria sulphuraria | 40.7 | 3e-133 | 404 |
| LLPS-Scc-0722 | Schizosaccharomyces cryophilus | 40.68 | 6e-49 | 174 |
| LLPS-Cii-0095 | Ciona intestinalis | 40.61 | 6e-132 | 400 |
| LLPS-Drm-1002 | Drosophila melanogaster | 40.37 | 2e-129 | 394 |
| LLPS-Abg-0017 | Absidia glauca | 40.0 | 1e-118 | 379 |
| LLPS-Yal-0294 | Yarrowia lipolytica | 38.41 | 2e-94 | 303 |
| LLPS-Usm-1220 | Ustilago maydis | 37.7 | 1e-95 | 308 |
| LLPS-Poa-0392 | Pongo abelii | 37.27 | 2e-97 | 308 |
| LLPS-Mel-0284 | Melampsora laricipopulina | 36.9 | 3e-108 | 340 |
| LLPS-Mea-0134 | Mesocricetus auratus | 36.89 | 2e-96 | 305 |
| LLPS-Pug-1120 | Puccinia graminis | 36.38 | 2e-100 | 319 |
| LLPS-Put-0605 | Puccinia triticina | 36.28 | 3e-98 | 314 |
| LLPS-Cae-0275 | Caenorhabditis elegans | 36.26 | 1e-113 | 353 |
| LLPS-Tum-0939 | Tuber melanosporum | 35.84 | 1e-91 | 308 |
| LLPS-Miv-0586 | Microbotryum violaceum | 35.8 | 9e-93 | 300 |
| LLPS-Cogr-0652 | Colletotrichum graminicola | 35.23 | 8e-98 | 312 |
| LLPS-Nec-1049 | Neurospora crassa | 34.96 | 5e-92 | 296 |
| LLPS-Asfu-1462 | Aspergillus fumigatus | 34.93 | 4e-95 | 307 |
| LLPS-Fuv-0695 | Fusarium verticillioides | 34.88 | 6e-96 | 307 |
| LLPS-Ast-0692 | Aspergillus terreus | 34.87 | 4e-96 | 307 |
| LLPS-Asni-1316 | Aspergillus niger | 34.79 | 4e-94 | 302 |
| LLPS-Cym-0254 | Cyanidioschyzon merolae | 34.78 | 3e-97 | 313 |
| LLPS-Fuo-0544 | Fusarium oxysporum | 34.78 | 2e-78 | 260 |
| LLPS-Nef-0152 | Neosartorya fischeri | 34.53 | 2e-95 | 306 |
| LLPS-Mao-0160 | Magnaporthe oryzae | 34.38 | 2e-95 | 306 |
| LLPS-Trr-0103 | Trichoderma reesei | 34.31 | 2e-94 | 303 |
| LLPS-Fus-0150 | Fusarium solani | 34.11 | 4e-96 | 308 |
| LLPS-Trv-1373 | Trichoderma virens | 34.06 | 5e-96 | 307 |
| LLPS-Aso-1283 | Aspergillus oryzae | 33.79 | 2e-95 | 306 |
| LLPS-Blg-0140 | Blumeria graminis | 33.79 | 7e-95 | 304 |
| LLPS-Asf-0280 | Aspergillus flavus | 33.79 | 2e-95 | 306 |
| LLPS-Gag-0377 | Gaeumannomyces graminis | 33.79 | 4e-97 | 310 |
| LLPS-Ved-0716 | Verticillium dahliae | 33.79 | 8e-95 | 304 |
| LLPS-Asc-0649 | Aspergillus clavatus | 33.66 | 1e-93 | 302 |
| LLPS-Map-1251 | Magnaporthe poae | 33.59 | 1e-96 | 309 |
| LLPS-Cog-1239 | Colletotrichum gloeosporioides | 33.47 | 1e-85 | 279 |
| LLPS-Scs-0589 | Sclerotinia sclerotiorum | 33.33 | 8e-85 | 277 |
| LLPS-Coo-0293 | Colletotrichum orbiculare | 33.26 | 2e-86 | 281 |
| LLPS-Asn-0229 | Aspergillus nidulans | 33.14 | 1e-93 | 301 |
| LLPS-Phn-0440 | Phaeosphaeria nodorum | 32.95 | 2e-88 | 288 |
| LLPS-Beb-1159 | Beauveria bassiana | 32.87 | 8e-95 | 304 |
| LLPS-Lem-1295 | Leptosphaeria maculans | 32.44 | 9e-90 | 291 |
| LLPS-Dos-0054 | Dothistroma septosporum | 32.39 | 4e-92 | 297 |
| LLPS-Zyt-0728 | Zymoseptoria tritici | 32.35 | 1e-89 | 291 |
| LLPS-Pytr-0689 | Pyrenophora triticirepentis | 32.26 | 9e-78 | 259 |
| LLPS-Asg-1030 | Ashbya gossypii | 32.23 | 1e-76 | 257 |
| LLPS-Pyt-0068 | Pyrenophora teres | 32.19 | 2e-77 | 258 |