• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Chc-0519
CHC_T00008943001

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Gene Name: CHC_T00008943001
Ensembl Gene: CHC_T00008943001
Ensembl Protein: CDF41260
Organism: Chondrus crispus
Taxa ID: 2769
LLPS Type: Client


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ FUNCTION

Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblCDF41260CDF41260
UniProtR7QV80, R7QV80_CHOCR
GeneBankHG002333CDF41260.1
RefSeqXM_005711497.1XP_005711554.1

▼ SEQUENCE

Protein Sequence (FASTA)
1     MLLRPFAGRL  ARAIAAAPVR  ATRALSTSTS  KVGGYDVVDH  ETDVLVVGAG  GAGLRATIGA  60
61    CEAGLRTANV  TKLFPTRSHT  VAAQGGINGA  LGNMTPDDWR  WHMYDTVKGS  DWLGDQDAIH  120
121   YMCREAPATI  IELENYGVPF  SRTEDGRIYQ  RAFGGQSLDF  GKGGQAYRCA  AAADRTGHAM  180
181   LHTLYGQALK  HDAEFFVEYF  ALDLIMDPVD  GSCRGVTALC  MEDGSLHRFN  AHATIIATGG  240
241   YGRAYFSATS  AHTCTGDGNA  MVARAGIPLQ  DLEFVQFHPT  GIYGAGCLIT  EGSRGEGGFL  300
301   KNSEGERFME  RYAPSAKDLA  SRDVVSRSMT  MEIREGRGVG  PKKDHIHLHL  DHLEPSVLAE  360
361   RLPGISETAK  IFAGVDVTKE  PIPVLPTVHY  NMGGIPTNWR  GEVVTVKDGD  PNYVVPGLFA  420
421   AGEAACASVH  GANRLGANSL  LDIVVFGRAT  AMRCGEIIKP  DTPVRPLPKG  AGEEAIADMD  480
481   KVRYADGEIR  TSAIREDMQK  IMQDNAAVFR  TQESLSQGCK  LIDECYESFG  KVKITDRDMI  540
541   WNTDMVETLE  LRNLLQNAVI  TMHGAEARKE  SRGAHAREDF  TERDDEVWMK  HTLGWVSSHE  600
601   EKKNSRGFAH  IDYRPVVSKS  LDDSEQEAFP  PAKRVY  636
Nucleotide CDS Sequence (FASTA)
1     ATGCTTCTCC  GCCCCTTTGC  CGGTCGTCTA  GCGCGAGCGA  TTGCGGCCGC  GCCCGTTCGC  60
61    GCCACTCGCG  CCTTGTCGAC  GTCGACGTCA  AAGGTGGGCG  GGTACGACGT  GGTGGACCAT  120
121   GAAACGGACG  TACTGGTTGT  AGGCGCGGGC  GGAGCCGGCC  TGCGTGCGAC  GATCGGCGCC  180
181   TGCGAGGCCG  GCCTTCGCAC  CGCCAATGTG  ACCAAGCTCT  TCCCGACCCG  CTCGCACACG  240
241   GTCGCCGCGC  AGGGCGGCAT  CAACGGCGCC  TTGGGGAACA  TGACCCCGGA  CGATTGGCGC  300
301   TGGCATATGT  ACGATACCGT  CAAGGGTTCA  GACTGGCTGG  GCGATCAGGA  TGCCATTCAT  360
361   TATATGTGTC  GGGAGGCCCC  GGCCACCATT  ATCGAGCTCG  AGAACTACGG  CGTCCCGTTT  420
421   AGTCGCACCG  AGGATGGCCG  CATTTATCAG  AGGGCTTTTG  GAGGCCAGTC  ACTGGACTTT  480
481   GGAAAGGGGG  GACAGGCCTA  TCGTTGCGCC  GCCGCCGCGG  ATCGCACAGG  TCATGCTATG  540
541   TTGCATACAC  TGTATGGACA  GGCGCTCAAG  CATGATGCCG  AGTTTTTCGT  CGAGTACTTT  600
601   GCCTTGGATT  TAATCATGGA  CCCCGTGGAT  GGCAGCTGCA  GGGGTGTAAC  GGCGCTATGT  660
661   ATGGAGGACG  GGTCTTTACA  TCGCTTCAAT  GCCCATGCTA  CCATCATTGC  CACCGGGGGA  720
721   TACGGGCGCG  CGTATTTCAG  CGCAACATCT  GCACATACAT  GCACGGGCGA  TGGCAATGCC  780
781   ATGGTTGCGC  GAGCAGGCAT  TCCATTGCAG  GATCTTGAAT  TTGTGCAGTT  TCATCCGACG  840
841   GGAATATACG  GGGCTGGATG  TCTGATTACA  GAGGGGTCTC  GTGGGGAGGG  AGGATTTTTG  900
901   AAAAACTCGG  AGGGCGAACG  TTTCATGGAG  CGGTATGCGC  CCTCAGCGAA  AGATCTCGCT  960
961   TCTCGGGACG  TGGTGTCGCG  CTCGATGACT  ATGGAGATTC  GTGAAGGGCG  TGGAGTGGGG  1020
1021  CCGAAGAAGG  ACCACATTCA  TCTGCATCTC  GACCATTTGG  AGCCGTCGGT  GCTCGCCGAG  1080
1081  CGATTGCCCG  GTATATCTGA  AACGGCCAAG  ATCTTTGCTG  GTGTGGACGT  GACCAAGGAA  1140
1141  CCGATCCCCG  TATTGCCCAC  AGTGCATTAC  AACATGGGAG  GGATTCCGAC  AAACTGGCGT  1200
1201  GGGGAGGTTG  TGACGGTCAA  GGATGGAGAT  CCAAACTACG  TGGTTCCAGG  GCTTTTCGCA  1260
1261  GCCGGTGAGG  CGGCATGCGC  CAGCGTGCAT  GGTGCGAATC  GGCTCGGTGC  AAATTCCTTG  1320
1321  CTCGACATTG  TGGTATTTGG  GCGGGCAACG  GCGATGAGAT  GCGGAGAAAT  CATCAAACCG  1380
1381  GACACGCCAG  TGCGGCCTTT  ACCCAAGGGT  GCTGGGGAGG  AGGCGATCGC  GGACATGGAC  1440
1441  AAGGTGCGGT  ATGCGGACGG  AGAGATTCGG  ACGTCTGCGA  TTCGCGAGGA  CATGCAAAAG  1500
1501  ATCATGCAAG  ACAACGCGGC  GGTGTTCCGG  ACGCAAGAGT  CGCTGTCGCA  AGGGTGCAAG  1560
1561  CTAATCGATG  AGTGCTACGA  GAGCTTTGGC  AAGGTGAAAA  TCACGGACCG  GGACATGATC  1620
1621  TGGAACACAG  ACATGGTAGA  GACGCTGGAG  CTGCGAAACC  TCCTGCAGAA  CGCGGTGATC  1680
1681  ACGATGCACG  GGGCCGAGGC  GCGCAAGGAG  TCACGCGGGG  CGCATGCCCG  CGAGGACTTT  1740
1741  ACAGAGAGAG  ATGACGAGGT  ATGGATGAAG  CATACGCTGG  GTTGGGTGTC  GAGCCACGAA  1800
1801  GAAAAGAAGA  ACTCGCGAGG  GTTTGCGCAC  ATCGATTACC  GGCCGGTGGT  TTCGAAGAGC  1860
1861  TTGGATGATT  CGGAGCAGGA  AGCGTTCCCG  CCGGCGAAGC  GGGTGTATTA  G  1911

▼ KEYWORD

ID
Family
Complete proteome
Electron transport
FAD
Flavoprotein
Membrane
Oxidoreductase
Reference proteome
Transit peptide
Transport
Tricarboxylic acid cycle

▼ GENE ONTOLOGY

ID
Classification
Description
Cellular Component
Mitochondrial inner membrane
Cellular Component
Respiratory chain complex II
Molecular Function
Flavin adenine dinucleotide binding
Molecular Function
Succinate dehydrogenase (ubiquinone) activity
Biological Process
Electron transport chain
Biological Process
Tricarboxylic acid cycle

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Vir-1979Vigna radiata84.340.0 681
LLPS-Chr-1243Chlamydomonas reinhardtii77.570.0 926
LLPS-Php-2517Physcomitrella patens77.240.0 909
LLPS-Pot-2711Populus trichocarpa77.120.0 907
LLPS-Sem-1847Selaginella moellendorffii76.910.0 909
LLPS-Coc-2095Corchorus capsularis76.910.0 905
LLPS-Met-1965Medicago truncatula76.740.0 902
LLPS-Thc-1555Theobroma cacao76.740.0 907
LLPS-Prp-0627Prunus persica76.740.0 906
LLPS-Orbr-1879Oryza brachyantha76.670.0 901
LLPS-Brd-1086Brachypodium distachyon76.580.0 897
LLPS-Gor-1775Gossypium raimondii76.410.0 905
LLPS-Sol-1154Solanum lycopersicum76.380.0 907
LLPS-Cus-0848Cucumis sativus76.350.0 908
LLPS-Orm-1021Oryza meridionalis76.280.0 899
LLPS-Sot-1828Solanum tuberosum76.220.0 906
LLPS-Gas-1321Galdieria sulphuraria76.20.0 946
LLPS-Art-0648Arabidopsis thaliana76.190.0 904
LLPS-Orgl-1280Oryza glumaepatula76.140.0 905
LLPS-Orni-0995Oryza nivara76.140.0 905
LLPS-Ori-2287Oryza indica76.140.0 905
LLPS-Org-0766Oryza glaberrima76.140.0 905
LLPS-Orr-1524Oryza rufipogon76.140.0 905
LLPS-Mae-2474Manihot esculenta76.140.0 904
LLPS-Ors-1619Oryza sativa76.140.0 905
LLPS-Tru-0996Triticum urartu76.080.0 895
LLPS-Mua-0191Musa acuminata75.990.0 898
LLPS-Sei-1712Setaria italica75.980.0 904
LLPS-Orb-2386Oryza barthii75.980.0 905
LLPS-Arl-2707Arabidopsis lyrata75.860.0 902
LLPS-Hov-2121Hordeum vulgare75.860.0 857
LLPS-Orp-1165Oryza punctata75.820.0 903
LLPS-Viv-1303Vitis vinifera75.820.0 903
LLPS-Zem-0924Zea mays75.650.0 902
LLPS-Lep-0579Leersia perrieri75.580.0 888
LLPS-Via-1662Vigna angularis75.580.0 888
LLPS-Amt-2007Amborella trichopoda75.420.0 882
LLPS-Bro-1010Brassica oleracea75.370.0 897
LLPS-Tra-2726Triticum aestivum75.330.0 898
LLPS-Sob-2124Sorghum bicolor75.330.0 898
LLPS-Hea-0159Helianthus annuus75.240.0 905
LLPS-Brn-0204Brassica napus75.080.0 897
LLPS-Phv-0726Phaseolus vulgaris75.080.0 889
LLPS-Rhb-1638Rhinopithecus bieti75.01e-68 230
LLPS-Dac-2221Daucus carota74.920.0 899
LLPS-Cym-0357Cyanidioschyzon merolae74.920.0 928
LLPS-Brr-2931Brassica rapa74.920.0 888
LLPS-Pes-1080Pelodiscus sinensis74.92e-121 370
LLPS-Cis-1891Ciona savignyi74.651e-144 430
LLPS-Glm-2850Glycine max74.380.0 884
LLPS-Osl-1057Ostreococcus lucimarinus73.420.0 866
LLPS-Mal-1109Mandrillus leucophaeus73.112e-96 303
LLPS-Usm-1070Ustilago maydis72.010.0 870
LLPS-Mel-0652Melampsora laricipopulina71.780.0 852
LLPS-Abg-0717Absidia glauca71.760.0 858
LLPS-Spr-1410Sporisorium reilianum71.690.0 867
LLPS-Crn-0769Cryptococcus neoformans71.640.0 857
LLPS-Trr-0211Trichoderma reesei71.430.0 834
LLPS-Pug-1004Puccinia graminis71.220.0 850
LLPS-Gag-1202Gaeumannomyces graminis71.10.0 826
LLPS-Trv-1605Trichoderma virens70.930.0 828
LLPS-Orc-1339Oryctolagus cuniculus70.910.0 753
LLPS-Miv-1589Microbotryum violaceum70.890.0 846
LLPS-Asc-0458Aspergillus clavatus70.760.0 825
LLPS-Nef-1124Neosartorya fischeri70.760.0 823
LLPS-Map-0688Magnaporthe poae70.60.0 819
LLPS-Asn-1155Aspergillus nidulans70.430.0 821
LLPS-Dos-1554Dothistroma septosporum70.430.0 829
LLPS-Asfu-0063Aspergillus fumigatus70.430.0 823
LLPS-Tum-1234Tuber melanosporum70.350.0 767
LLPS-Blg-1119Blumeria graminis70.270.0 825
LLPS-Coo-1357Colletotrichum orbiculare70.270.0 806
LLPS-Fuo-1183Fusarium oxysporum70.270.0 815
LLPS-Beb-0486Beauveria bassiana70.270.0 804
LLPS-Mao-0513Magnaporthe oryzae70.20.0 821
LLPS-Zyt-1286Zymoseptoria tritici70.10.0 831
LLPS-Nec-0816Neurospora crassa70.10.0 820
LLPS-Asf-1276Aspergillus flavus70.10.0 818
LLPS-Aso-1357Aspergillus oryzae70.10.0 818
LLPS-Asni-1345Aspergillus niger70.10.0 820
LLPS-Ved-0165Verticillium dahliae70.10.0 824
LLPS-Fuv-0067Fusarium verticillioides69.930.0 813
LLPS-Cogr-1569Colletotrichum graminicola69.930.0 804
LLPS-Ast-0888Aspergillus terreus69.930.0 817
LLPS-Pyt-0302Pyrenophora teres69.770.0 816
LLPS-Pytr-1453Pyrenophora triticirepentis69.770.0 816
LLPS-Scj-0025Schizosaccharomyces japonicus69.440.0 828
LLPS-Yal-0932Yarrowia lipolytica69.270.0 808
LLPS-Lem-0658Leptosphaeria maculans69.10.0 815
LLPS-Cog-0639Colletotrichum gloeosporioides68.770.0 791
LLPS-Dar-3303Danio rerio68.660.0 823
LLPS-Scc-1207Schizosaccharomyces cryophilus68.520.0 839
LLPS-Asm-3918Astyanax mexicanus68.50.0 823
LLPS-Phn-1091Phaeosphaeria nodorum68.470.0 801
LLPS-Icp-0244Ictalurus punctatus68.340.0 823
LLPS-Asg-0871Ashbya gossypii68.330.0 806
LLPS-Gaa-3819Gasterosteus aculeatus68.170.0 820
LLPS-Orl-0189Oryzias latipes68.010.0 823
LLPS-Scm-0550Scophthalmus maximus68.010.0 823
LLPS-Put-1035Puccinia triticina67.940.0 727
LLPS-Scp-0948Schizosaccharomyces pombe67.820.0 825
LLPS-Scf-4072Scleropages formosus67.690.0 812
LLPS-Lac-1320Latimeria chalumnae67.590.0 790
LLPS-Xim-2114Xiphophorus maculatus67.530.0 814
LLPS-Tar-3095Takifugu rubripes67.210.0 816
LLPS-Orn-3153Oreochromis niloticus67.210.0 811
LLPS-Pof-3913Poecilia formosa67.150.0 808
LLPS-Cap-2413Cavia porcellus67.040.0 803
LLPS-Kop-0421Komagataella pastoris66.940.0 804
LLPS-Aim-2528Ailuropoda melanoleuca66.880.0 807
LLPS-Drm-1816Drosophila melanogaster66.880.0 805
LLPS-Tag-0573Taeniopygia guttata66.880.0 806
LLPS-Gaga-3798Gallus gallus66.880.0 805
LLPS-Fia-3058Ficedula albicollis66.880.0 806
LLPS-Sac-1428Saccharomyces cerevisiae66.830.0 808
LLPS-Myl-1328Myotis lucifugus66.720.0 802
LLPS-Ran-2990Rattus norvegicus66.720.0 806
LLPS-Sus-0787Sus scrofa66.720.0 800
LLPS-Mea-2951Mesocricetus auratus66.720.0 806
LLPS-Loa-1764Loxodonta africana66.720.0 802
LLPS-Anp-0248Anas platyrhynchos66.670.0 800
LLPS-Anc-1169Anolis carolinensis66.560.0 808
LLPS-Ten-0393Tetraodon nigroviridis66.560.0 808
LLPS-Fec-3903Felis catus66.560.0 803
LLPS-Dio-3917Dipodomys ordii66.40.0 803
LLPS-Tut-0157Tursiops truncatus66.40.0 799
LLPS-Sah-3756Sarcophilus harrisii66.40.0 800
LLPS-Mum-3932Mus musculus66.40.0 800
LLPS-Mod-3506Monodelphis domestica66.350.0 806
LLPS-Urm-1962Ursus maritimus66.350.0 806
LLPS-Maf-1168Macaca fascicularis66.320.0 725
LLPS-Ict-4068Ictidomys tridecemlineatus66.070.0 797
LLPS-Caf-1091Canis familiaris66.070.0 797
LLPS-Mam-1257Macaca mulatta66.030.0 801
LLPS-Caj-3812Callithrix jacchus65.870.0 801
LLPS-Otg-4106Otolemur garnettii65.870.0 799
LLPS-Hos-4087Homo sapiens65.870.0 799
LLPS-Pap-4181Pan paniscus65.870.0 798
LLPS-Eqc-1712Equus caballus65.760.0 797
LLPS-Bot-4736Bos taurus65.730.0 754
LLPS-Aon-0734Aotus nancymaae65.710.0 800
LLPS-Pat-1044Pan troglodytes65.710.0 799
LLPS-Poa-2207Pongo abelii65.610.0 754
LLPS-Ora-3364Ornithorhynchus anatinus65.590.0 796
LLPS-Ova-0484Ovis aries65.270.0 769
LLPS-Mup-1893Mustela putorius furo65.180.0 743
LLPS-Meg-3352Meleagris gallopavo64.940.0 766
LLPS-Cae-0808Caenorhabditis elegans62.620.0 749
LLPS-Paa-3263Papio anubis61.965e-170 500
LLPS-Cii-2338Ciona intestinalis61.830.0 655
LLPS-Leo-3513Lepisosteus oculatus58.628e-59 213
LLPS-Man-2863Macaca nemestrina58.130.0 654
LLPS-Gog-4025Gorilla gorilla57.528e-147 440
LLPS-Cea-3440Cercocebus atys52.744e-131 399