DrLLPS - Data resource of LLPS

LLPS-Caj-1645

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Small nuclear ribonucleoprotein G
Ensembl Gene:	ENSCJAG00000040628.1
Ensembl Protein:	ENSCJAP00000067488.1
Organism:	Callithrix jacchus
Taxa ID:	9483
LLPS Type:	Client

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Nucleolus	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-0702	P62309	Client	Nuclear speckle, Nucleolus	88.69	0.0	548

▼ FUNCTION

Plays role in pre-mRNA splicing as core component of the SMN-Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ENSCJAT00000044253.3	ENSCJAP00000067488.1
UniProt		A0A2R8N006, A0A2R8N006_CALJA

▼ SEQUENCE

Protein Sequence (FASTA)
1 MSKAHPPELK KFMDKKLSLK LNGGRYVQGI LRGFDPFMNL VMDECVEMAT SGQQNNIGMV 60 61 VIRGNSIIML EALERV 76
Nucleotide CDS Sequence (FASTA)
1 ATGAGCAAAG CTCACCCTCC CGAGTTGAAA AAATTTATGG ACAAGAAGTT ATCATTGAAA 60 61 TTAAATGGTG GCAGATACGT CCAAGGAATA TTGCGGGGAT TTGATCCCTT TATGAATCTT 120 121 GTGATGGATG AATGTGTGGA GATGGCGACT AGTGGACAAC AGAATAATAT TGGAATGGTG 180 181 GTAATACGCG GAAATAGTAT CATCATGTTA GAAGCCTTGG AACGAGTATA A 231

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0963	Cytoplasm
KW-0507	mRNA processing
KW-0508	mRNA splicing
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0687	Ribonucleoprotein
KW-0694	RNA-binding
KW-0747	Spliceosome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005829	Cellular Component	Cytosol
GO:0005681	Cellular Component	Spliceosomal complex
GO:0003723	Molecular Function	RNA binding
GO:0000387	Biological Process	Spliceosomal snRNP assembly

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Fec-2213	Felis catus	97.37	4e-48	153
LLPS-Loa-1168	Loxodonta africana	97.37	4e-48	153
LLPS-Rhb-0470	Rhinopithecus bieti	97.37	4e-48	153
LLPS-Cap-0541	Cavia porcellus	97.37	4e-48	153
LLPS-Poa-1730	Pongo abelii	97.37	4e-48	153
LLPS-Caf-0065	Canis familiaris	97.37	4e-48	153
LLPS-Ict-1868	Ictidomys tridecemlineatus	97.37	4e-48	153
LLPS-Chs-2425	Chlorocebus sabaeus	97.37	4e-48	153
LLPS-Mum-0702	Mus musculus	97.37	4e-48	153
LLPS-Mea-2587	Mesocricetus auratus	97.37	4e-48	153
LLPS-Sus-3174	Sus scrofa	97.37	4e-48	153
LLPS-Fud-2550	Fukomys damarensis	97.37	4e-48	153
LLPS-Bot-3737	Bos taurus	97.37	1e-47	152
LLPS-Dio-1221	Dipodomys ordii	97.37	4e-48	153
LLPS-Ran-1864	Rattus norvegicus	97.37	4e-48	153
LLPS-Mup-1179	Mustela putorius furo	97.37	4e-48	153
LLPS-Ova-4370	Ovis aries	97.37	4e-48	153
LLPS-Tut-2081	Tursiops truncatus	96.92	6e-39	129
LLPS-Aim-1012	Ailuropoda melanoleuca	96.67	8e-37	125
LLPS-Orc-0726	Oryctolagus cuniculus	96.05	3e-47	151
LLPS-Mam-2005	Macaca mulatta	96.05	4e-47	150
LLPS-Maf-3151	Macaca fascicularis	96.05	1e-47	152
LLPS-Myl-1708	Myotis lucifugus	96.05	2e-47	151
LLPS-Ere-0219	Erinaceus europaeus	95.95	2e-45	146
LLPS-Cea-0058	Cercocebus atys	95.89	2e-45	146
LLPS-Mal-3916	Mandrillus leucophaeus	95.89	2e-45	146
LLPS-Cas-0699	Carlito syrichta	95.24	8e-38	127
LLPS-Mod-2014	Monodelphis domestica	94.74	3e-46	148
LLPS-Gaga-1851	Gallus gallus	94.74	3e-46	148
LLPS-Aon-0938	Aotus nancymaae	94.74	3e-46	148
LLPS-Sah-3646	Sarcophilus harrisii	94.74	3e-46	148
LLPS-Urm-2747	Ursus maritimus	94.12	1e-39	132
LLPS-Leo-2152	Lepisosteus oculatus	93.42	7e-46	147
LLPS-Paa-2903	Papio anubis	93.42	9e-45	145
LLPS-Gaa-0947	Gasterosteus aculeatus	93.02	3e-22	86.3
LLPS-Man-1397	Macaca nemestrina	91.78	7e-42	137
LLPS-Lac-0761	Latimeria chalumnae	90.79	6e-44	142
LLPS-Pof-0529	Poecilia formosa	90.79	3e-44	143
LLPS-Xim-0978	Xiphophorus maculatus	90.79	3e-44	143
LLPS-Pap-0361	Pan paniscus	89.47	2e-40	134
LLPS-Scf-0591	Scleropages formosus	89.47	1e-43	142
LLPS-Nol-3941	Nomascus leucogenys	89.39	8e-36	122
LLPS-Anp-1481	Anas platyrhynchos	88.57	2e-37	125
LLPS-Fia-0269	Ficedula albicollis	88.57	7e-38	127
LLPS-Orl-0980	Oryzias latipes	88.33	4e-33	115
LLPS-Scm-0992	Scophthalmus maximus	88.16	7e-43	140
LLPS-Dar-0747	Danio rerio	88.16	1e-42	139
LLPS-Pat-1019	Pan troglodytes	88.16	6e-40	132
LLPS-Ten-2547	Tetraodon nigroviridis	88.16	2e-42	139
LLPS-Xet-1977	Xenopus tropicalis	88.16	3e-43	140
LLPS-Asm-0036	Astyanax mexicanus	86.89	5e-33	115
LLPS-Gog-3918	Gorilla gorilla	86.84	1e-38	129
LLPS-Eqc-1975	Equus caballus	86.76	2e-35	120
LLPS-Otg-0623	Otolemur garnettii	86.49	1e-39	132
LLPS-Tag-1223	Taeniopygia guttata	84.21	4e-39	130
LLPS-Icp-2284	Ictalurus punctatus	84.21	2e-37	125
LLPS-Anc-0147	Anolis carolinensis	82.89	4e-40	133
LLPS-Hos-0273	Homo sapiens	80.26	4e-37	125
LLPS-Tar-1588	Takifugu rubripes	72.5	2e-32	113
LLPS-Drm-0884	Drosophila melanogaster	72.37	6e-35	120
LLPS-Mua-2308	Musa acuminata	64.94	5e-27	99.8
LLPS-Cae-0605	Caenorhabditis elegans	64.47	1e-30	108
LLPS-Amt-0535	Amborella trichopoda	63.64	9e-26	96.7
LLPS-Php-0089	Physcomitrella patens	63.64	1e-26	98.6
LLPS-Fuo-1053	Fusarium oxysporum	62.86	1e-25	96.3
LLPS-Ors-1675	Oryza sativa	62.34	4e-25	94.7
LLPS-Sob-2118	Sorghum bicolor	62.34	2e-25	95.9
LLPS-Orbr-0992	Oryza brachyantha	62.34	3e-25	95.1
LLPS-Orr-0533	Oryza rufipogon	62.34	4e-25	94.7
LLPS-Org-2066	Oryza glaberrima	62.34	4e-25	94.7
LLPS-Ori-0995	Oryza indica	62.34	4e-25	94.7
LLPS-Orni-0866	Oryza nivara	62.34	4e-25	94.7
LLPS-Orgl-1473	Oryza glumaepatula	62.34	4e-25	94.7
LLPS-Lep-0600	Leersia perrieri	62.34	3e-25	95.1
LLPS-Sei-1369	Setaria italica	62.34	3e-25	95.1
LLPS-Nef-0293	Neosartorya fischeri	61.43	1e-23	91.3
LLPS-Ved-1346	Verticillium dahliae	61.43	5e-25	94.7
LLPS-Asc-1014	Aspergillus clavatus	61.43	1e-23	91.3
LLPS-Asf-0442	Aspergillus flavus	61.43	1e-23	90.9
LLPS-Brd-0483	Brachypodium distachyon	61.33	2e-24	92.8
LLPS-Brr-0566	Brassica rapa	61.04	1e-23	90.9
LLPS-Art-0608	Arabidopsis thaliana	61.04	6e-24	91.7
LLPS-Mae-0655	Manihot esculenta	61.04	2e-24	92.8
LLPS-Coc-0987	Corchorus capsularis	61.04	4e-24	92.4
LLPS-Prp-0016	Prunus persica	61.04	2e-24	92.8
LLPS-Bro-0493	Brassica oleracea	61.04	2e-23	90.5
LLPS-Zem-1460	Zea mays	61.04	2e-24	92.8
LLPS-Glm-0090	Glycine max	61.04	7e-25	94.4
LLPS-Brn-1027	Brassica napus	61.04	2e-23	90.5
LLPS-Arl-1803	Arabidopsis lyrata	61.04	2e-23	90.5
LLPS-Chr-0419	Chlamydomonas reinhardtii	60.53	3e-23	89.7
LLPS-Ast-1460	Aspergillus terreus	60.0	2e-23	90.5
LLPS-Trr-1345	Trichoderma reesei	60.0	2e-24	93.2
LLPS-Trv-0766	Trichoderma virens	60.0	2e-24	93.2
LLPS-Asfu-1175	Aspergillus fumigatus	60.0	2e-23	90.5
LLPS-Cogr-0050	Colletotrichum graminicola	60.0	1e-24	93.6
LLPS-Scs-0548	Sclerotinia sclerotiorum	60.0	2e-24	92.8
LLPS-Coo-1229	Colletotrichum orbiculare	60.0	1e-24	93.6
LLPS-Blg-1289	Blumeria graminis	60.0	4e-24	92.4
LLPS-Gor-0552	Gossypium raimondii	59.74	2e-23	90.5
LLPS-Viv-0029	Vitis vinifera	59.74	1e-23	90.9
LLPS-Sem-1971	Selaginella moellendorffii	59.74	8e-23	89.0
LLPS-Sol-1586	Solanum lycopersicum	59.74	1e-23	90.9
LLPS-Hea-1793	Helianthus annuus	59.74	1e-23	91.3
LLPS-Dac-1405	Daucus carota	59.74	7e-24	91.7
LLPS-Thc-0041	Theobroma cacao	59.74	2e-23	90.5
LLPS-Sot-0108	Solanum tuberosum	59.74	6e-24	92.0
LLPS-Cus-0858	Cucumis sativus	59.74	1e-23	90.9
LLPS-Asn-0186	Aspergillus nidulans	58.57	5e-23	89.4
LLPS-Tum-0931	Tuber melanosporum	58.57	6e-24	91.7
LLPS-Pot-1905	Populus trichocarpa	58.44	3e-23	90.1
LLPS-Orp-0729	Oryza punctata	58.44	8e-24	91.7
LLPS-Phv-0758	Phaseolus vulgaris	58.44	2e-23	90.5
LLPS-Orm-1156	Oryza meridionalis	58.44	7e-24	92.0
LLPS-Orb-1806	Oryza barthii	58.44	8e-24	91.7
LLPS-Met-0712	Medicago truncatula	58.44	1e-23	91.3
LLPS-Vir-0696	Vigna radiata	58.44	8e-23	90.5
LLPS-Aso-0990	Aspergillus oryzae	57.63	1e-15	71.2
LLPS-Cog-0643	Colletotrichum gloeosporioides	56.45	2e-19	80.9
LLPS-Put-0596	Puccinia triticina	55.84	1e-21	86.3
LLPS-Mel-0972	Melampsora laricipopulina	55.84	3e-21	84.7
LLPS-Beb-0954	Beauveria bassiana	55.71	3e-23	90.1
LLPS-Gag-0693	Gaeumannomyces graminis	55.71	6e-23	89.4
LLPS-Lem-0748	Leptosphaeria maculans	55.71	4e-23	89.7
LLPS-Nec-1140	Neurospora crassa	55.71	4e-23	89.7
LLPS-Crn-0053	Cryptococcus neoformans	55.41	9e-22	86.3
LLPS-Chc-0632	Chondrus crispus	54.93	5e-23	89.4
LLPS-Sac-1057	Saccharomyces cerevisiae	54.79	2e-18	77.8
LLPS-Tra-0731	Triticum aestivum	54.67	5e-19	79.3
LLPS-Pug-1293	Puccinia graminis	54.55	2e-21	85.5
LLPS-Phn-0789	Phaeosphaeria nodorum	54.29	3e-23	90.1
LLPS-Map-0419	Magnaporthe poae	54.29	7e-23	89.4
LLPS-Hov-1928	Hordeum vulgare	54.22	1e-20	84.0
LLPS-Osl-1122	Ostreococcus lucimarinus	53.12	8e-17	73.2
LLPS-Pytr-1112	Pyrenophora triticirepentis	52.86	3e-22	87.8
LLPS-Dos-0742	Dothistroma septosporum	52.86	1e-22	88.6
LLPS-Mao-0602	Magnaporthe oryzae	52.86	3e-21	85.1
LLPS-Pyt-0110	Pyrenophora teres	52.86	3e-22	87.8
LLPS-Asg-0102	Ashbya gossypii	51.43	6e-19	78.6
LLPS-Zyt-1160	Zymoseptoria tritici	51.43	1e-21	85.5
LLPS-Miv-0936	Microbotryum violaceum	50.7	9e-16	70.5
LLPS-Gas-0128	Galdieria sulphuraria	50.7	6e-21	84.0
LLPS-Scc-1001	Schizosaccharomyces cryophilus	50.0	4e-23	89.7
LLPS-Usm-0207	Ustilago maydis	48.81	6e-20	81.6
LLPS-Spr-0316	Sporisorium reilianum	48.81	5e-20	82.0
LLPS-Scj-0662	Schizosaccharomyces japonicus	48.68	1e-22	88.6
LLPS-Scp-0638	Schizosaccharomyces pombe	48.0	1e-21	85.9
LLPS-Asni-1169	Aspergillus niger	47.89	4e-17	74.7
LLPS-Kop-0447	Komagataella pastoris	45.71	5e-18	76.6
LLPS-Fus-0326	Fusarium solani	38.03	2e-12	63.2
LLPS-Fuv-0841	Fusarium verticillioides	38.03	2e-12	62.8
LLPS-Via-0041	Vigna angularis	37.33	2e-12	62.0
LLPS-Abg-1600	Absidia glauca	36.49	3e-11	59.7

LLPS-Caj-1645

Protein Sequence

Nucleotide Sequence