LLPS-Brn-0214
BnaA08g26520D
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Importin subunit alpha |
Gene Name: | BnaA08g26520D, GSBRNA2T00047183001 |
Ensembl Gene: | GSBRNA2T00047183001 |
Ensembl Protein: | CDY31102 |
Organism: | Brassica napus |
Taxa ID: | 3708 |
LLPS Type: | Regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
P-body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | CDY31102 | CDY31102 |
UniProt | A0A078H0W1, A0A078H0W1_BRANA | |
GeneBank | LK032267 | CDY31102.1 |
RefSeq | XM_013802233.1, XM_013802234.1 | XP_013657687.1, XP_013657688.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSLRPSTRAE LRKKIYKTGV DADEARRRRE DNLVEIRKNK REDSLLKKRR EGMMLQQQQQ 60 61 QPTGAGLDAL QSAAAVEKRL EGIPMMVQGV YSDDPQAQLE ATTQFRKLLS IERSPPIDEV 120 121 IKAGVIPRFV EFLGRQDHPQ LQFEAAWALT NVASGTSDHT RVVIEHGAVP IFVELLSSAS 180 181 DDVREQAVWA LGNVAGDSPN CRNLVLSCGA LIPLLSQLNE NSKLSMLRNA TWTLSNFCRG 240 241 KPPTPFEEVK PALPVLRQLI YLNDEEVLTD ACWALSYLSD GPNDKIQAVI QAGVCPRLVE 300 301 LLSHPSPTVL IPALRTVGNI VTGDDSQTQF IIDSGVLPHL YNLLTQNHKK SIKKEACWTI 360 361 SNITAGNQAQ IEAVVGAGLV LPLVHLLQNA EFDIKKEAAW AISNATSGGS HEQIQYLVNQ 420 421 GCIKPLCDLL ICPDPRIVTV CLEGLENILK ISEADKEMGL NGGVNLYAQI IEESDGLDKI 480 481 ENLQSHDNNE IYEKAVKILE KYWAEEEDEE QILTDGGNEN PQQGFSFGNN QPAAPPGGFK 540 541 FG 542 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCGCTGA GGCCGAGCAC ACGCGCGGAG CTGAGGAAGA AGATATACAA GACAGGTGTT 60 61 GACGCCGATG AAGCTAGGCG GAGGAGAGAG GACAACCTCG TCGAGATCAG AAAAAACAAA 120 121 CGCGAGGACA GTCTCCTCAA GAAACGCCGC GAAGGAATGA TGCTCCAGCA GCAGCAGCAG 180 181 CAGCCTACCG GAGCTGGTCT CGACGCCCTC CAGAGCGCTG CCGCCGTTGA GAAACGATTG 240 241 GAAGGTATCC CAATGATGGT GCAAGGTGTT TATTCTGATG ATCCCCAAGC TCAGCTAGAA 300 301 GCCACTACTC AATTTAGAAA GTTGTTATCT ATAGAGCGTA GTCCTCCTAT AGATGAAGTG 360 361 ATCAAAGCTG GTGTTATCCC ACGTTTTGTT GAGTTTCTTG GAAGGCAAGA CCATCCACAA 420 421 CTTCAGTTTG AGGCTGCATG GGCTTTGACC AACGTTGCGT CAGGGACATC AGATCATACT 480 481 CGTGTTGTGA TTGAACATGG GGCGGTACCT ATCTTCGTTG AGCTTCTTAG CTCTGCTAGT 540 541 GATGACGTTC GAGAGCAGGC GGTGTGGGCC TTGGGGAATG TTGCTGGAGA CTCGCCAAAC 600 601 TGCAGGAATC TTGTTCTCAG CTGCGGTGCT CTTATACCGT TGCTGTCTCA GTTAAACGAA 660 661 AATTCAAAGT TATCTATGCT AAGGAATGCT ACATGGACCT TGTCCAACTT TTGTCGTGGG 720 721 AAACCACCAA CACCATTTGA AGAGGTGAAG CCTGCCCTGC CAGTTCTTCG GCAACTTATC 780 781 TATCTAAATG ATGAAGAAGT TCTCACAGAT GCTTGCTGGG CTCTCTCCTA CCTTTCAGAT 840 841 GGCCCCAATG ATAAGATCCA GGCTGTGATC CAGGCTGGTG TCTGTCCACG ACTTGTGGAG 900 901 CTTCTGAGTC ATCCATCACC TACGGTTCTC ATTCCTGCAC TTCGAACTGT TGGGAACATT 960 961 GTAACTGGTG ATGATTCTCA GACACAGTTT ATAATTGATA GTGGCGTACT TCCACACCTT 1020 1021 TATAATTTAC TTACACAAAA TCACAAGAAA AGTATTAAAA AAGAAGCTTG TTGGACTATC 1080 1081 TCAAATATCA CTGCTGGTAA CCAAGCTCAG ATAGAGGCTG TGGTTGGTGC TGGATTAGTA 1140 1141 CTTCCTCTTG TGCACTTGCT CCAGAACGCT GAGTTCGATA TAAAGAAAGA AGCTGCATGG 1200 1201 GCCATTTCCA ATGCCACATC AGGAGGGTCT CACGAGCAGA TTCAATATTT GGTGAACCAA 1260 1261 GGCTGCATCA AACCTCTATG TGATCTCCTA ATCTGCCCTG ATCCTAGGAT TGTGACTGTG 1320 1321 TGCCTCGAAG GGCTTGAAAA CATTCTCAAG ATCAGTGAGG CTGACAAGGA GATGGGACTA 1380 1381 AACGGTGGGG TGAATCTCTA TGCTCAGATA ATAGAAGAGT CCGATGGACT AGACAAAATC 1440 1441 GAAAACCTTC AGTCACATGA CAACAACGAG ATATATGAGA AGGCTGTTAA GATCTTGGAG 1500 1501 AAATATTGGG CTGAAGAAGA AGATGAAGAG CAGATTCTGA CAGACGGTGG GAACGAGAAT 1560 1561 CCACAACAGG GCTTCAGTTT CGGTAATAAC CAGCCAGCTG CTCCTCCTGG TGGATTTAAG 1620 1621 TTTGGCTAA 1629 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Bro-1448 | Brassica oleracea | 99.08 | 0.0 | 1026 |
LLPS-Brr-0552 | Brassica rapa | 96.31 | 0.0 | 1000 |
LLPS-Arl-2466 | Arabidopsis lyrata | 93.91 | 0.0 | 968 |
LLPS-Art-1596 | Arabidopsis thaliana | 92.62 | 0.0 | 946 |
LLPS-Gor-0277 | Gossypium raimondii | 85.45 | 0.0 | 899 |
LLPS-Coc-1938 | Corchorus capsularis | 84.53 | 0.0 | 890 |
LLPS-Thc-0417 | Theobroma cacao | 84.25 | 0.0 | 889 |
LLPS-Mae-1182 | Manihot esculenta | 83.95 | 0.0 | 870 |
LLPS-Pot-1576 | Populus trichocarpa | 83.03 | 0.0 | 874 |
LLPS-Sot-0788 | Solanum tuberosum | 83.03 | 0.0 | 868 |
LLPS-Sol-0061 | Solanum lycopersicum | 82.84 | 0.0 | 866 |
LLPS-Viv-0579 | Vitis vinifera | 82.69 | 0.0 | 870 |
LLPS-Nia-0168 | Nicotiana attenuata | 82.1 | 0.0 | 857 |
LLPS-Prp-2002 | Prunus persica | 81.55 | 0.0 | 859 |
LLPS-Cus-1937 | Cucumis sativus | 80.85 | 0.0 | 848 |
LLPS-Glm-1206 | Glycine max | 76.34 | 0.0 | 786 |
LLPS-Zem-2589 | Zea mays | 75.2 | 0.0 | 745 |
LLPS-Php-1721 | Physcomitrella patens | 75.14 | 0.0 | 768 |
LLPS-Mua-1560 | Musa acuminata | 74.95 | 0.0 | 779 |
LLPS-Vir-0910 | Vigna radiata | 74.86 | 0.0 | 765 |
LLPS-Via-2184 | Vigna angularis | 74.26 | 0.0 | 760 |
LLPS-Met-1230 | Medicago truncatula | 74.26 | 0.0 | 761 |
LLPS-Amt-1823 | Amborella trichopoda | 74.17 | 0.0 | 771 |
LLPS-Hea-1740 | Helianthus annuus | 73.94 | 0.0 | 753 |
LLPS-Phv-2356 | Phaseolus vulgaris | 73.53 | 0.0 | 755 |
LLPS-Brd-2420 | Brachypodium distachyon | 73.27 | 0.0 | 740 |
LLPS-Tru-1091 | Triticum urartu | 73.08 | 0.0 | 744 |
LLPS-Tra-1247 | Triticum aestivum | 73.08 | 0.0 | 744 |
LLPS-Orp-1406 | Oryza punctata | 72.52 | 0.0 | 736 |
LLPS-Lep-1207 | Leersia perrieri | 72.51 | 0.0 | 755 |
LLPS-Orgl-1316 | Oryza glumaepatula | 72.34 | 0.0 | 737 |
LLPS-Orb-0437 | Oryza barthii | 72.34 | 0.0 | 737 |
LLPS-Orm-0572 | Oryza meridionalis | 72.32 | 0.0 | 751 |
LLPS-Org-0778 | Oryza glaberrima | 72.32 | 0.0 | 751 |
LLPS-Ors-1730 | Oryza sativa | 72.32 | 0.0 | 750 |
LLPS-Ori-0779 | Oryza indica | 72.16 | 0.0 | 726 |
LLPS-Orr-0629 | Oryza rufipogon | 71.75 | 0.0 | 736 |
LLPS-Sob-0362 | Sorghum bicolor | 71.22 | 0.0 | 746 |
LLPS-Hov-1230 | Hordeum vulgare | 71.22 | 0.0 | 734 |
LLPS-Orbr-0801 | Oryza brachyantha | 71.03 | 0.0 | 729 |
LLPS-Sei-0627 | Setaria italica | 70.48 | 0.0 | 735 |
LLPS-Sem-1193 | Selaginella moellendorffii | 70.35 | 0.0 | 731 |
LLPS-Orni-2330 | Oryza nivara | 69.93 | 0.0 | 726 |
LLPS-Dac-2249 | Daucus carota | 65.24 | 0.0 | 719 |
LLPS-Chr-1314 | Chlamydomonas reinhardtii | 62.98 | 0.0 | 630 |
LLPS-Osl-0501 | Ostreococcus lucimarinus | 61.92 | 0.0 | 607 |
LLPS-Phn-1333 | Phaeosphaeria nodorum | 61.86 | 2e-176 | 514 |
LLPS-Gas-0099 | Galdieria sulphuraria | 60.71 | 0.0 | 591 |
LLPS-Cog-0318 | Colletotrichum gloeosporioides | 60.31 | 0.0 | 550 |
LLPS-Mel-0289 | Melampsora laricipopulina | 60.15 | 0.0 | 564 |
LLPS-Pug-0310 | Puccinia graminis | 60.12 | 0.0 | 546 |
LLPS-Fuo-0668 | Fusarium oxysporum | 60.0 | 0.0 | 554 |
LLPS-Fuv-1029 | Fusarium verticillioides | 60.0 | 0.0 | 554 |
LLPS-Pytr-0295 | Pyrenophora triticirepentis | 59.96 | 0.0 | 533 |
LLPS-Cogr-0059 | Colletotrichum graminicola | 59.96 | 0.0 | 549 |
LLPS-Fus-1103 | Fusarium solani | 59.81 | 0.0 | 553 |
LLPS-Trv-1149 | Trichoderma virens | 59.77 | 0.0 | 550 |
LLPS-Beb-0176 | Beauveria bassiana | 59.77 | 0.0 | 555 |
LLPS-Nec-0625 | Neurospora crassa | 59.76 | 0.0 | 533 |
LLPS-Coo-1424 | Colletotrichum orbiculare | 59.69 | 0.0 | 546 |
LLPS-Pyt-0403 | Pyrenophora teres | 59.64 | 0.0 | 535 |
LLPS-Trr-0178 | Trichoderma reesei | 59.57 | 0.0 | 549 |
LLPS-Lem-0538 | Leptosphaeria maculans | 59.52 | 0.0 | 539 |
LLPS-Mao-1285 | Magnaporthe oryzae | 59.49 | 0.0 | 544 |
LLPS-Fia-0569 | Ficedula albicollis | 59.39 | 1e-171 | 500 |
LLPS-Blg-0677 | Blumeria graminis | 59.34 | 0.0 | 535 |
LLPS-Asn-0636 | Aspergillus nidulans | 59.34 | 0.0 | 556 |
LLPS-Dos-0786 | Dothistroma septosporum | 59.24 | 0.0 | 528 |
LLPS-Chc-0767 | Chondrus crispus | 59.22 | 0.0 | 582 |
LLPS-Asc-0429 | Aspergillus clavatus | 59.22 | 0.0 | 555 |
LLPS-Aon-2404 | Aotus nancymaae | 59.17 | 2e-174 | 509 |
LLPS-Aso-0120 | Aspergillus oryzae | 59.11 | 0.0 | 551 |
LLPS-Asf-0705 | Aspergillus flavus | 59.11 | 0.0 | 551 |
LLPS-Ved-1391 | Verticillium dahliae | 59.08 | 0.0 | 531 |
LLPS-Asfu-0373 | Aspergillus fumigatus | 59.03 | 0.0 | 555 |
LLPS-Nef-0967 | Neosartorya fischeri | 59.03 | 0.0 | 554 |
LLPS-Gag-1206 | Gaeumannomyces graminis | 59.03 | 0.0 | 552 |
LLPS-Zyt-0523 | Zymoseptoria tritici | 58.84 | 1e-179 | 525 |
LLPS-Crn-0453 | Cryptococcus neoformans | 58.67 | 0.0 | 533 |
LLPS-Map-0249 | Magnaporthe poae | 58.64 | 0.0 | 552 |
LLPS-Ast-0980 | Aspergillus terreus | 58.45 | 0.0 | 549 |
LLPS-Put-0181 | Puccinia triticina | 57.59 | 5e-169 | 497 |
LLPS-Tum-0208 | Tuber melanosporum | 57.25 | 4e-179 | 523 |
LLPS-Tag-0575 | Taeniopygia guttata | 57.17 | 3e-173 | 508 |
LLPS-Leo-0867 | Lepisosteus oculatus | 57.05 | 1e-173 | 509 |
LLPS-Gaga-0927 | Gallus gallus | 56.97 | 1e-169 | 506 |
LLPS-Anp-2248 | Anas platyrhynchos | 56.97 | 4e-173 | 508 |
LLPS-Anc-2101 | Anolis carolinensis | 56.94 | 6e-172 | 504 |
LLPS-Sah-1405 | Sarcophilus harrisii | 56.94 | 6e-172 | 505 |
LLPS-Spr-0381 | Sporisorium reilianum | 56.92 | 0.0 | 529 |
LLPS-Usm-0637 | Ustilago maydis | 56.61 | 2e-179 | 524 |
LLPS-Pes-2513 | Pelodiscus sinensis | 56.52 | 6e-172 | 507 |
LLPS-Miv-0546 | Microbotryum violaceum | 56.36 | 0.0 | 528 |
LLPS-Abg-1931 | Absidia glauca | 56.36 | 4e-177 | 518 |
LLPS-Icp-3416 | Ictalurus punctatus | 56.35 | 6e-172 | 505 |
LLPS-Eqc-3148 | Equus caballus | 55.9 | 1e-170 | 501 |
LLPS-Mal-3637 | Mandrillus leucophaeus | 55.89 | 3e-173 | 508 |
LLPS-Paa-0703 | Papio anubis | 55.89 | 3e-173 | 508 |
LLPS-Maf-4713 | Macaca fascicularis | 55.89 | 3e-173 | 508 |
LLPS-Asm-1163 | Astyanax mexicanus | 55.89 | 7e-173 | 508 |
LLPS-Cap-1657 | Cavia porcellus | 55.88 | 1e-178 | 521 |
LLPS-Bot-4382 | Bos taurus | 55.88 | 4e-179 | 523 |
LLPS-Fud-4196 | Fukomys damarensis | 55.88 | 2e-178 | 521 |
LLPS-Xet-0948 | Xenopus tropicalis | 55.86 | 5e-177 | 517 |
LLPS-Mod-1939 | Monodelphis domestica | 55.77 | 3e-173 | 508 |
LLPS-Loa-1637 | Loxodonta africana | 55.71 | 1e-174 | 511 |
LLPS-Ict-3964 | Ictidomys tridecemlineatus | 55.69 | 4e-178 | 520 |
LLPS-Fec-2996 | Felis catus | 55.69 | 9e-178 | 520 |
LLPS-Urm-3078 | Ursus maritimus | 55.69 | 9e-178 | 520 |
LLPS-Orc-0219 | Oryctolagus cuniculus | 55.69 | 6e-178 | 520 |
LLPS-Dio-0622 | Dipodomys ordii | 55.69 | 3e-176 | 518 |
LLPS-Tut-1114 | Tursiops truncatus | 55.69 | 8e-177 | 517 |
LLPS-Ran-2079 | Rattus norvegicus | 55.69 | 2e-178 | 521 |
LLPS-Sus-3408 | Sus scrofa | 55.69 | 5e-178 | 520 |
LLPS-Mum-4601 | Mus musculus | 55.69 | 2e-178 | 521 |
LLPS-Meg-1227 | Meleagris gallopavo | 55.64 | 5e-178 | 520 |
LLPS-Ten-1239 | Tetraodon nigroviridis | 55.58 | 5e-177 | 518 |
LLPS-Gaa-3659 | Gasterosteus aculeatus | 55.58 | 1e-175 | 514 |
LLPS-Xim-2775 | Xiphophorus maculatus | 55.56 | 5e-172 | 505 |
LLPS-Ova-2943 | Ovis aries | 55.56 | 5e-177 | 518 |
LLPS-Mam-0582 | Macaca mulatta | 55.49 | 4e-176 | 516 |
LLPS-Hos-0720 | Homo sapiens | 55.49 | 2e-176 | 516 |
LLPS-Scf-0245 | Scleropages formosus | 55.49 | 4e-170 | 500 |
LLPS-Myl-2774 | Myotis lucifugus | 55.49 | 8e-177 | 517 |
LLPS-Chs-3058 | Chlorocebus sabaeus | 55.49 | 2e-176 | 516 |
LLPS-Scm-3715 | Scophthalmus maximus | 55.38 | 6e-176 | 515 |
LLPS-Orn-2860 | Oreochromis niloticus | 55.38 | 2e-176 | 516 |
LLPS-Caf-0779 | Canis familiaris | 55.36 | 2e-175 | 514 |
LLPS-Pap-1025 | Pan paniscus | 55.36 | 8e-174 | 510 |
LLPS-Pat-1464 | Pan troglodytes | 55.36 | 8e-174 | 510 |
LLPS-Aim-3211 | Ailuropoda melanoleuca | 55.36 | 1e-175 | 514 |
LLPS-Gog-1859 | Gorilla gorilla | 55.36 | 8e-174 | 509 |
LLPS-Dar-4244 | Danio rerio | 55.34 | 3e-175 | 513 |
LLPS-Caj-1763 | Callithrix jacchus | 55.29 | 2e-175 | 514 |
LLPS-Cas-1312 | Carlito syrichta | 55.23 | 4e-174 | 510 |
LLPS-Pof-1605 | Poecilia formosa | 55.23 | 2e-170 | 501 |
LLPS-Tar-2551 | Takifugu rubripes | 55.19 | 6e-175 | 512 |
LLPS-Orl-0830 | Oryzias latipes | 54.97 | 2e-171 | 503 |
LLPS-Lac-2517 | Latimeria chalumnae | 54.51 | 2e-173 | 508 |
LLPS-Poa-0362 | Pongo abelii | 54.39 | 2e-167 | 493 |
LLPS-Nol-3937 | Nomascus leucogenys | 54.39 | 1e-167 | 494 |
LLPS-Man-1350 | Macaca nemestrina | 54.39 | 2e-167 | 493 |
LLPS-Rhb-3243 | Rhinopithecus bieti | 54.39 | 2e-167 | 493 |
LLPS-Cea-3714 | Cercocebus atys | 54.39 | 2e-167 | 493 |
LLPS-Mup-2014 | Mustela putorius furo | 54.19 | 6e-168 | 494 |
LLPS-Yal-0529 | Yarrowia lipolytica | 53.82 | 6e-170 | 499 |
LLPS-Scj-0572 | Schizosaccharomyces japonicus | 53.71 | 2e-171 | 504 |