LLPS-Bot-1827
TUBB5
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Tubulin beta-5 chain |
Gene Name: | TUBB5 |
Ensembl Gene: | ENSBTAG00000006969.5 |
Ensembl Protein: | ENSBTAP00000009158.4 |
Organism: | Bos taurus |
Taxa ID: | 9913 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, Postsynaptic density | Predicted from orthologs | (View) |
▼ FUNCTION
Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity). |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSBTAT00000009158.5 | ENSBTAP00000009158.4 |
UniProt | Q2KJD0, TBB5_BOVIN, A5D9A3 | |
GeneBank | BC105401, BT030522 | ABQ12962.1, AAI05402.1 |
RefSeq | NM_001046549.2 | NP_001040014.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MREIVHIQAG QCGNQIGAKF WEVISDEHGI DPTGTYHGDS DLQLDRISVY YNEATGGKYV 60 61 PRAILVDLEP GTMDSVRSGP FGQIFRPDNF VFGQSGAGNN WAKGHYTEGA ELVDSVLDVV 120 121 RKEAESCDCL QGFQLTHSLG GGTGSGMGTL LISKIREEYP DRIMNTFSVV PSPKVSDTVV 180 181 EPYNATLSVH QLVENTDETY CIDNEALYDI CFRTLKLTTP TYGDLNHLVS ATMSGVTTCL 240 241 RFPGQLNADL RKLAVNMVPF PRLHFFMPGF APLTSRGSQQ YRALTVPELT QQVFDAKNMM 300 301 AACDPRHGRY LTVAAVFRGR MSMKEVDEQM LNVQNKNSSY FVEWIPNNVK TAVCDIPPRG 360 361 LKMAVTFIGN STAIQELFKR ISEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS 420 421 EYQQYQDATA EEEEDFGEEA EEEA 444 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAGGGAAA TCGTGCACAT CCAGGCCGGT CAGTGTGGCA ATCAGATCGG TGCCAAGTTC 60 61 TGGGAGGTGA TCAGTGATGA ACATGGCATC GACCCCACCG GCACCTATCA TGGGGACAGC 120 121 GACCTACAAC TGGACCGCAT CTCCGTGTAC TACAATGAAG CCACAGGTGG CAAATATGTC 180 181 CCTCGTGCTA TCTTGGTGGA TCTAGAACCC GGAACCATGG ACTCTGTTCG CTCAGGTCCT 240 241 TTTGGTCAGA TCTTCAGACC AGACAACTTT GTTTTTGGTC AGTCCGGGGC AGGCAACAAC 300 301 TGGGCCAAGG GCCACTATAC AGAGGGAGCC GAGCTGGTTG ACTCGGTCCT GGATGTGGTT 360 361 CGGAAGGAGG CCGAGAGCTG TGACTGCCTG CAGGGCTTCC AGCTGACCCA CTCGCTGGGT 420 421 GGGGGCACTG GCTCCGGAAT GGGCACCTTG CTCATCAGCA AGATCCGTGA AGAGTATCCC 480 481 GACCGCATCA TGAACACCTT CAGCGTGGTG CCCTCACCCA AAGTTTCCGA CACTGTGGTT 540 541 GAGCCCTACA ACGCCACCCT CTCTGTCCAT CAGCTGGTGG AGAACACTGA TGAAACCTAC 600 601 TGCATTGACA ACGAGGCCCT TTACGACATA TGTTTCCGCA CCCTCAAGCT GACCACACCA 660 661 ACCTATGGAG ACCTGAACCA CCTCGTCTCG GCCACCATGA GTGGAGTCAC CACTTGCCTC 720 721 CGCTTTCCTG GCCAGCTCAA TGCTGACCTC CGCAAGCTGG CCGTCAACAT GGTGCCCTTC 780 781 CCACGCCTCC ACTTCTTCAT GCCTGGCTTT GCCCCTCTTA CCAGCCGTGG CAGCCAGCAG 840 841 TATCGGGCCC TCACTGTCCC TGAGCTCACC CAGCAGGTCT TCGATGCCAA GAACATGATG 900 901 GCTGCCTGTG ACCCCCGCCA TGGCCGGTAC CTCACCGTGG CTGCTGTGTT CCGTGGGCGG 960 961 ATGTCCATGA AGGAGGTAGA TGAGCAGATG CTCAACGTGC AGAATAAGAA CAGCAGCTAC 1020 1021 TTCGTGGAAT GGATCCCCAA CAACGTCAAG ACAGCTGTTT GCGACATCCC ACCCCGTGGT 1080 1081 CTGAAGATGG CAGTCACCTT CATTGGCAAC AGCACAGCCA TCCAGGAGCT GTTCAAGCGC 1140 1141 ATCTCGGAGC AGTTCACGGC CATGTTCCGC CGGAAGGCCT TCCTCCACTG GTACACAGGT 1200 1201 GAGGGCATGG ACGAGATGGA GTTCACCGAG GCTGAGAGCA ACATGAACGA CCTCGTCTCC 1260 1261 GAGTACCAGC AGTACCAGGA TGCCACCGCA GAAGAGGAAG AGGATTTCGG TGAGGAGGCC 1320 1321 GAAGAGGAGG CCTAA 1335 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cell body | |
Cellular Component | Cytoplasm | |
Cellular Component | Cytoplasmic ribonucleoprotein granule | |
Cellular Component | Microtubule | |
Cellular Component | Nuclear envelope lumen | |
Molecular Function | GTP binding | |
Molecular Function | GTPase activity | |
Molecular Function | MHC class I protein binding | |
Molecular Function | Structural constituent of cytoskeleton | |
Molecular Function | Ubiquitin protein ligase binding | |
Biological Process | Microtubule cytoskeleton organization | |
Biological Process | Microtubule-based process | |
Biological Process | Mitotic cell cycle | |
Biological Process | Regulation of synapse organization | |
Biological Process | Spindle assembly |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Cas-0144 | Carlito syrichta | 100.0 | 0.0 | 856 |
LLPS-Xet-2638 | Xenopus tropicalis | 100.0 | 0.0 | 856 |
LLPS-Gaga-0956 | Gallus gallus | 100.0 | 0.0 | 856 |
LLPS-Nol-3585 | Nomascus leucogenys | 100.0 | 0.0 | 856 |
LLPS-Ict-0371 | Ictidomys tridecemlineatus | 100.0 | 0.0 | 856 |
LLPS-Cap-2266 | Cavia porcellus | 100.0 | 0.0 | 856 |
LLPS-Caf-1898 | Canis familiaris | 100.0 | 0.0 | 856 |
LLPS-Poa-2450 | Pongo abelii | 100.0 | 0.0 | 856 |
LLPS-Mam-1384 | Macaca mulatta | 100.0 | 0.0 | 856 |
LLPS-Rhb-0035 | Rhinopithecus bieti | 100.0 | 0.0 | 856 |
LLPS-Fec-0714 | Felis catus | 100.0 | 0.0 | 856 |
LLPS-Mod-1514 | Monodelphis domestica | 100.0 | 0.0 | 856 |
LLPS-Hos-2586 | Homo sapiens | 100.0 | 0.0 | 856 |
LLPS-Urm-3705 | Ursus maritimus | 100.0 | 0.0 | 856 |
LLPS-Pat-3341 | Pan troglodytes | 100.0 | 0.0 | 856 |
LLPS-Man-2333 | Macaca nemestrina | 100.0 | 0.0 | 856 |
LLPS-Ran-0387 | Rattus norvegicus | 100.0 | 0.0 | 856 |
LLPS-Ova-2492 | Ovis aries | 100.0 | 0.0 | 856 |
LLPS-Paa-2063 | Papio anubis | 100.0 | 0.0 | 815 |
LLPS-Mal-0435 | Mandrillus leucophaeus | 100.0 | 0.0 | 856 |
LLPS-Dio-3081 | Dipodomys ordii | 100.0 | 0.0 | 856 |
LLPS-Gog-0740 | Gorilla gorilla | 100.0 | 0.0 | 856 |
LLPS-Caj-4022 | Callithrix jacchus | 100.0 | 0.0 | 856 |
LLPS-Chs-2404 | Chlorocebus sabaeus | 100.0 | 0.0 | 856 |
LLPS-Mum-2220 | Mus musculus | 100.0 | 0.0 | 856 |
LLPS-Maf-1203 | Macaca fascicularis | 100.0 | 0.0 | 856 |
LLPS-Mea-0977 | Mesocricetus auratus | 100.0 | 0.0 | 856 |
LLPS-Aon-0745 | Aotus nancymaae | 100.0 | 0.0 | 856 |
LLPS-Cea-2760 | Cercocebus atys | 100.0 | 0.0 | 856 |
LLPS-Sah-2303 | Sarcophilus harrisii | 100.0 | 0.0 | 856 |
LLPS-Ten-2857 | Tetraodon nigroviridis | 99.77 | 0.0 | 854 |
LLPS-Orn-1311 | Oreochromis niloticus | 99.77 | 0.0 | 854 |
LLPS-Scm-0346 | Scophthalmus maximus | 99.77 | 0.0 | 854 |
LLPS-Dar-0751 | Danio rerio | 99.77 | 0.0 | 854 |
LLPS-Pof-2149 | Poecilia formosa | 99.77 | 0.0 | 854 |
LLPS-Xim-3736 | Xiphophorus maculatus | 99.77 | 0.0 | 853 |
LLPS-Scf-1527 | Scleropages formosus | 99.77 | 0.0 | 854 |
LLPS-Gaa-1416 | Gasterosteus aculeatus | 99.77 | 0.0 | 854 |
LLPS-Icp-3812 | Ictalurus punctatus | 99.77 | 0.0 | 854 |
LLPS-Orl-3812 | Oryzias latipes | 99.77 | 0.0 | 854 |
LLPS-Orc-2133 | Oryctolagus cuniculus | 99.53 | 0.0 | 851 |
LLPS-Lac-1301 | Latimeria chalumnae | 99.53 | 0.0 | 853 |
LLPS-Mup-3390 | Mustela putorius furo | 99.53 | 0.0 | 851 |
LLPS-Eqc-1937 | Equus caballus | 99.51 | 0.0 | 813 |
LLPS-Fud-1632 | Fukomys damarensis | 99.3 | 0.0 | 850 |
LLPS-Anc-3698 | Anolis carolinensis | 98.36 | 0.0 | 845 |
LLPS-Tar-2601 | Takifugu rubripes | 98.13 | 0.0 | 847 |
LLPS-Asm-3759 | Astyanax mexicanus | 98.13 | 0.0 | 846 |
LLPS-Cii-2095 | Ciona intestinalis | 98.13 | 0.0 | 846 |
LLPS-Leo-2361 | Lepisosteus oculatus | 98.13 | 0.0 | 845 |
LLPS-Cis-0796 | Ciona savignyi | 98.13 | 0.0 | 846 |
LLPS-Anp-3174 | Anas platyrhynchos | 98.0 | 0.0 | 784 |
LLPS-Sus-0286 | Sus scrofa | 97.82 | 0.0 | 803 |
LLPS-Otg-1654 | Otolemur garnettii | 97.42 | 0.0 | 839 |
LLPS-Fia-0318 | Ficedula albicollis | 97.42 | 0.0 | 842 |
LLPS-Pap-1145 | Pan paniscus | 97.42 | 0.0 | 839 |
LLPS-Myl-2541 | Myotis lucifugus | 97.42 | 0.0 | 839 |
LLPS-Aim-3912 | Ailuropoda melanoleuca | 97.42 | 0.0 | 842 |
LLPS-Tut-2274 | Tursiops truncatus | 97.42 | 0.0 | 842 |
LLPS-Pes-0306 | Pelodiscus sinensis | 97.19 | 0.0 | 840 |
LLPS-Tag-2634 | Taeniopygia guttata | 96.96 | 0.0 | 838 |
LLPS-Ere-0293 | Erinaceus europaeus | 96.96 | 0.0 | 833 |
LLPS-Ora-3257 | Ornithorhynchus anatinus | 96.96 | 0.0 | 837 |
LLPS-Drm-0325 | Drosophila melanogaster | 96.32 | 0.0 | 793 |
LLPS-Cae-1271 | Caenorhabditis elegans | 95.32 | 0.0 | 825 |
LLPS-Loa-2963 | Loxodonta africana | 94.85 | 0.0 | 815 |
LLPS-Chr-0860 | Chlamydomonas reinhardtii | 89.93 | 0.0 | 790 |
LLPS-Php-1447 | Physcomitrella patens | 89.46 | 0.0 | 791 |
LLPS-Orbr-1685 | Oryza brachyantha | 88.29 | 0.0 | 773 |
LLPS-Sem-1389 | Selaginella moellendorffii | 88.06 | 0.0 | 782 |