DrLLPS - Data resource of LLPS

LLPS-Ast-0481
LSM3

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	U6 snRNA-associated Sm-like protein LSm3
Gene Name:	LSM3, ATEG_02012
Ensembl Gene:	ATEG_02012
Ensembl Protein:	EAU36974
Organism:	Aspergillus terreus
Taxa ID:	341663
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, P-body, Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Saccharomyces cerevisiae	LLPS-Sac-0139	P57743	Client	P-body, Stress granule	53.16	1e-18	79.3
Homo sapiens	LLPS-Hos-0925	P62310	Client	Stress granule	51.06	2e-21	87.0
Mus musculus	LLPS-Mum-1136	P62311	Client	Nuclear speckle	51.06	2e-21	87.0

▼ FUNCTION

Binds specifically to the 3'-terminal U-tract of U6 snRNA.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	EAU36974	EAU36974
UniProt		Q0CWC2, Q0CWC2_ASPTN
GeneBank	CH476596	EAU36974.1
RefSeq	XM_001211190.1	XP_001211190.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MADTEDAGSA PSVSEPLDLV RLSLDEIVFV KLRGDRELKG RLHAYDSHCN LVLGDVEETI 60 61 YVVEDDENEE ETIRTIKKQE EMLFVRGDSV VLISPQA 97

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0507	mRNA processing
KW-0508	mRNA splicing
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0687	Ribonucleoprotein
KW-0694	RNA-binding
KW-0747	Spliceosome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0071013	Cellular Component	Catalytic step 2 spliceosome
GO:1990726	Cellular Component	Lsm1-7-Pat1 complex
GO:0000932	Cellular Component	P-body
GO:0046540	Cellular Component	U4/U6 x U5 tri-snRNP complex
GO:0005688	Cellular Component	U6 snRNP
GO:0003723	Molecular Function	RNA binding
GO:0033962	Biological Process	Cytoplasmic mRNA processing body assembly
GO:0000398	Biological Process	MRNA splicing, via spliceosome
GO:0000956	Biological Process	Nuclear-transcribed mRNA catabolic process

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Asc-0713	Aspergillus clavatus	95.95	1e-35	122
LLPS-Asfu-0397	Aspergillus fumigatus	94.59	8e-35	120
LLPS-Nef-0774	Neosartorya fischeri	94.59	1e-34	120
LLPS-Asni-0955	Aspergillus niger	93.81	1e-58	181
LLPS-Asf-0142	Aspergillus flavus	92.78	3e-51	162
LLPS-Asn-0926	Aspergillus nidulans	92.78	6e-57	177
LLPS-Dos-0282	Dothistroma septosporum	81.25	1e-49	159
LLPS-Tum-0405	Tuber melanosporum	80.43	1e-45	148
LLPS-Lem-0783	Leptosphaeria maculans	79.52	2e-39	133
LLPS-Phn-0694	Phaeosphaeria nodorum	78.31	3e-38	129
LLPS-Pyt-1188	Pyrenophora teres	78.31	2e-40	135
LLPS-Zyt-0727	Zymoseptoria tritici	78.12	2e-46	150
LLPS-Nec-0552	Neurospora crassa	77.08	4e-40	134
LLPS-Cogr-0037	Colletotrichum graminicola	76.47	6e-35	121
LLPS-Trr-0843	Trichoderma reesei	74.67	5e-32	113
LLPS-Trv-0424	Trichoderma virens	73.96	1e-39	133
LLPS-Beb-0550	Beauveria bassiana	73.96	6e-41	136
LLPS-Fuo-1201	Fusarium oxysporum	73.63	2e-37	127
LLPS-Ved-0616	Verticillium dahliae	73.2	5e-38	129
LLPS-Cog-0812	Colletotrichum gloeosporioides	73.2	1e-36	125
LLPS-Coo-0318	Colletotrichum orbiculare	73.2	2e-37	127
LLPS-Gaga-1754	Gallus gallus	71.88	3e-09	54.3
LLPS-Fuv-0972	Fusarium verticillioides	71.88	7e-37	126
LLPS-Mao-0302	Magnaporthe oryzae	70.0	8e-37	126
LLPS-Gag-0907	Gaeumannomyces graminis	70.0	1e-35	123
LLPS-Fus-0200	Fusarium solani	69.47	4e-36	124
LLPS-Blg-0127	Blumeria graminis	69.07	5e-39	131
LLPS-Map-0210	Magnaporthe poae	68.89	1e-35	123
LLPS-Spr-1174	Sporisorium reilianum	67.82	2e-36	125
LLPS-Scp-0434	Schizosaccharomyces pombe	67.05	4e-36	124
LLPS-Orm-0017	Oryza meridionalis	66.67	2e-21	86.3
LLPS-Art-2395	Arabidopsis thaliana	65.88	5e-33	116
LLPS-Scc-0801	Schizosaccharomyces cryophilus	64.77	2e-33	117
LLPS-Glm-2417	Glycine max	64.71	5e-32	114
LLPS-Lep-1018	Leersia perrieri	64.62	5e-22	89.7
LLPS-Org-0787	Oryza glaberrima	64.29	3e-31	112
LLPS-Orp-0490	Oryza punctata	64.29	3e-31	112
LLPS-Ors-0447	Oryza sativa	64.29	3e-31	112
LLPS-Orni-0458	Oryza nivara	64.29	3e-31	112
LLPS-Ori-0097	Oryza indica	64.29	3e-31	112
LLPS-Orr-1139	Oryza rufipogon	64.0	2e-25	100
LLPS-Orgl-0797	Oryza glumaepatula	63.77	6e-22	90.5
LLPS-Usm-0166	Ustilago maydis	63.64	1e-38	130
LLPS-Phv-0450	Phaseolus vulgaris	63.53	6e-32	113
LLPS-Sob-1377	Sorghum bicolor	63.53	7e-32	113
LLPS-Orbr-0437	Oryza brachyantha	63.53	2e-31	112
LLPS-Gor-0037	Gossypium raimondii	63.53	7e-32	113
LLPS-Sei-1237	Setaria italica	63.53	7e-32	113
LLPS-Via-0042	Vigna angularis	63.53	7e-32	113
LLPS-Mua-1217	Musa acuminata	63.53	2e-31	112
LLPS-Drm-0840	Drosophila melanogaster	63.1	3e-30	109
LLPS-Arl-0342	Arabidopsis lyrata	62.5	2e-33	117
LLPS-Orb-0204	Oryza barthii	62.5	1e-28	105
LLPS-Tru-1157	Triticum urartu	62.35	3e-31	112
LLPS-Prp-0465	Prunus persica	62.35	2e-31	112
LLPS-Mae-0346	Manihot esculenta	62.35	2e-31	112
LLPS-Hov-0856	Hordeum vulgare	62.35	5e-31	112
LLPS-Cus-1413	Cucumis sativus	62.35	2e-31	112
LLPS-Tra-0837	Triticum aestivum	62.35	3e-31	112
LLPS-Brd-0373	Brachypodium distachyon	62.35	2e-31	112
LLPS-Thc-1641	Theobroma cacao	62.35	2e-31	112
LLPS-Mel-0358	Melampsora laricipopulina	62.03	2e-25	96.7
LLPS-Amt-0983	Amborella trichopoda	61.9	6e-30	108
LLPS-Miv-0174	Microbotryum violaceum	61.8	1e-32	115
LLPS-Scj-0925	Schizosaccharomyces japonicus	61.8	3e-24	93.6
LLPS-Pug-0460	Puccinia graminis	61.54	2e-29	107
LLPS-Chr-1194	Chlamydomonas reinhardtii	61.54	1e-32	115
LLPS-Bro-2951	Brassica oleracea	61.46	6e-33	116
LLPS-Pot-1472	Populus trichocarpa	61.18	1e-30	110
LLPS-Sot-0956	Solanum tuberosum	61.18	2e-30	109
LLPS-Dac-0175	Daucus carota	61.18	2e-30	110
LLPS-Hea-1146	Helianthus annuus	61.18	8e-31	110
LLPS-Sol-0155	Solanum lycopersicum	61.18	2e-30	109
LLPS-Put-1113	Puccinia triticina	60.82	7e-30	109
LLPS-Abg-0103	Absidia glauca	60.61	4e-33	117
LLPS-Brr-2541	Brassica rapa	60.42	2e-32	114
LLPS-Met-1239	Medicago truncatula	60.42	2e-32	114
LLPS-Brn-3055	Brassica napus	60.42	3e-32	114
LLPS-Osl-0529	Ostreococcus lucimarinus	60.0	2e-25	97.1
LLPS-Orl-0715	Oryzias latipes	59.79	3e-32	114
LLPS-Leo-1768	Lepisosteus oculatus	59.79	3e-32	114
LLPS-Cae-1508	Caenorhabditis elegans	59.77	3e-27	101
LLPS-Asg-0739	Ashbya gossypii	59.76	1e-25	97.1
LLPS-Gas-0427	Galdieria sulphuraria	59.52	2e-28	104
LLPS-Anp-0816	Anas platyrhynchos	59.09	5e-31	111
LLPS-Meg-0694	Meleagris gallopavo	59.09	4e-31	111
LLPS-Dio-1255	Dipodomys ordii	59.09	6e-31	111
LLPS-Bot-0421	Bos taurus	59.09	4e-31	111
LLPS-Kop-0632	Komagataella pastoris	59.04	2e-26	99.4
LLPS-Ten-1173	Tetraodon nigroviridis	58.76	7e-32	113
LLPS-Orn-0058	Oreochromis niloticus	58.76	6e-32	114
LLPS-Pof-1909	Poecilia formosa	58.76	6e-32	114
LLPS-Scm-2276	Scophthalmus maximus	58.76	6e-32	114
LLPS-Gaa-0530	Gasterosteus aculeatus	58.76	6e-32	114
LLPS-Scf-1337	Scleropages formosus	58.76	4e-32	114
LLPS-Xim-2864	Xiphophorus maculatus	58.76	6e-32	114
LLPS-Asm-0477	Astyanax mexicanus	58.76	4e-32	114
LLPS-Dar-0151	Danio rerio	58.51	2e-32	115
LLPS-Icp-1341	Ictalurus punctatus	58.51	4e-32	114
LLPS-Php-0016	Physcomitrella patens	58.33	4e-30	108
LLPS-Sem-1061	Selaginella moellendorffii	58.33	3e-27	101
LLPS-Anc-1669	Anolis carolinensis	57.73	2e-31	112
LLPS-Tag-0407	Taeniopygia guttata	57.73	2e-31	112
LLPS-Fia-0978	Ficedula albicollis	57.73	2e-31	112
LLPS-Pes-2407	Pelodiscus sinensis	57.73	2e-31	112
LLPS-Mod-0019	Monodelphis domestica	57.73	1e-31	113
LLPS-Ora-0330	Ornithorhynchus anatinus	57.73	1e-31	113
LLPS-Xet-3309	Xenopus tropicalis	57.45	8e-32	113
LLPS-Cas-1618	Carlito syrichta	57.45	4e-32	114
LLPS-Cis-0553	Ciona savignyi	57.45	3e-31	112
LLPS-Ict-3478	Ictidomys tridecemlineatus	57.14	4e-31	111
LLPS-Loa-1373	Loxodonta africana	57.14	3e-31	112
LLPS-Ova-2354	Ovis aries	57.14	3e-31	112
LLPS-Tar-0438	Takifugu rubripes	56.96	2e-22	90.5
LLPS-Yal-0584	Yarrowia lipolytica	56.84	8e-26	97.8
LLPS-Vir-1611	Vigna radiata	56.52	9e-09	52.0
LLPS-Nol-2637	Nomascus leucogenys	56.38	2e-31	112
LLPS-Mam-1529	Macaca mulatta	56.38	2e-31	112
LLPS-Poa-0737	Pongo abelii	56.38	2e-31	112
LLPS-Cap-2648	Cavia porcellus	56.38	2e-31	112
LLPS-Eqc-0410	Equus caballus	56.38	2e-31	112
LLPS-Orc-0323	Oryctolagus cuniculus	56.38	2e-31	112
LLPS-Rhb-0934	Rhinopithecus bieti	56.38	2e-31	112
LLPS-Otg-0772	Otolemur garnettii	56.38	2e-31	112
LLPS-Man-1373	Macaca nemestrina	56.38	2e-31	112
LLPS-Hos-0925	Homo sapiens	56.38	2e-31	112
LLPS-Pat-1385	Pan troglodytes	56.38	2e-31	112
LLPS-Pap-0257	Pan paniscus	56.38	2e-31	112
LLPS-Urm-1494	Ursus maritimus	56.38	2e-31	112
LLPS-Fec-0891	Felis catus	56.38	2e-31	112
LLPS-Paa-1754	Papio anubis	56.38	2e-31	112
LLPS-Mal-2225	Mandrillus leucophaeus	56.38	2e-31	112
LLPS-Aim-2410	Ailuropoda melanoleuca	56.38	2e-31	112
LLPS-Myl-1689	Myotis lucifugus	56.38	2e-31	112
LLPS-Ran-0969	Rattus norvegicus	56.38	2e-31	112
LLPS-Tut-0901	Tursiops truncatus	56.38	2e-31	112
LLPS-Fud-2079	Fukomys damarensis	56.38	2e-31	112
LLPS-Gog-1558	Gorilla gorilla	56.38	2e-31	112
LLPS-Sus-2187	Sus scrofa	56.38	2e-31	112
LLPS-Aon-3137	Aotus nancymaae	56.38	2e-31	112
LLPS-Cea-3244	Cercocebus atys	56.38	2e-31	112
LLPS-Maf-3511	Macaca fascicularis	56.38	2e-31	112
LLPS-Mum-1136	Mus musculus	56.38	2e-31	112
LLPS-Chc-0807	Chondrus crispus	56.1	3e-08	51.6
LLPS-Caf-0667	Canis familiaris	55.32	2e-30	109
LLPS-Viv-1746	Vitis vinifera	54.44	4e-24	94.0
LLPS-Sac-0139	Saccharomyces cerevisiae	53.16	9e-21	84.7
LLPS-Mup-2137	Mustela putorius furo	52.13	2e-25	96.7
LLPS-Chs-0179	Chlorocebus sabaeus	52.13	8e-27	100
LLPS-Cym-0814	Cyanidioschyzon merolae	50.59	1e-23	92.8
LLPS-Crn-0269	Cryptococcus neoformans	50.55	1e-22	89.7
LLPS-Caj-0561	Callithrix jacchus	47.87	7e-23	91.3
LLPS-Zem-0514	Zea mays	45.65	3e-16	73.9
LLPS-Coc-0717	Corchorus capsularis	44.66	1e-16	75.1
LLPS-Nia-2256	Nicotiana attenuata	31.71	6e-08	50.8

LLPS-Ast-0481LSM3

Protein Sequence

Nucleotide Sequence

LLPS-Ast-0481
LSM3