Vigna angularis      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 341 genes.  Reviewed (0 or Unreviewed (341

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Via-0566
LR48_Vigan307s001400
A0A0L9T9E7
EIF6
2
LLPS-Via-0889
LR48_Vigan02g155600
A0A0L9TY18
FEN1
3
LLPS-Via-0137
LR48_Vigan01g014600
A0A0L9TJJ7
LR48_Vigan01g014600
4
LLPS-Via-0643
LR48_Vigan01g018200
A0A0L9TJ31
LR48_Vigan01g018200
5
LLPS-Via-0318
LR48_Vigan01g048800
A0A0L9TJY7
LR48_Vigan01g048800
6
LLPS-Via-0577
LR48_Vigan01g050200
A0A0L9TKK0
LR48_Vigan01g050200
7
LLPS-Via-0328
LR48_Vigan01g060500
A0A0L9TKH7
LR48_Vigan01g060500
8
LLPS-Via-0875
LR48_Vigan01g066900
A0A0L9TLT4
LR48_Vigan01g066900
9
LLPS-Via-1192
LR48_Vigan01g085900
A0A0L9TMB5
LR48_Vigan01g085900
10
LLPS-Via-0953
LR48_Vigan01g092500
A0A0L9TLE1
LR48_Vigan01g092500
11
LLPS-Via-0845
LR48_Vigan01g120900
A0A0L9TNA5
LR48_Vigan01g120900
12
LLPS-Via-1393
LR48_Vigan01g126800
A0A0L9TM90
LR48_Vigan01g126800
13
LLPS-Via-0498
LR48_Vigan01g128200
A0A0L9TMQ3
LR48_Vigan01g128200
14
LLPS-Via-0652
LR48_Vigan01g131800
A0A0L9TME2
LR48_Vigan01g131800
15
LLPS-Via-0417
LR48_Vigan01g140900
A0A0L9TMN4
LR48_Vigan01g140900
16
LLPS-Via-0699
LR48_Vigan01g175500
A0A0L9TPU8
LR48_Vigan01g175500
17
LLPS-Via-0914
LR48_Vigan01g179100
A0A0L9TNV5
LR48_Vigan01g179100
18
LLPS-Via-1471
LR48_Vigan01g179400
A0A0L9TNS8
LR48_Vigan01g179400
19
LLPS-Via-0177
LR48_Vigan01g187600
A0A0L9TP42
LR48_Vigan01g187600
20
LLPS-Via-0062
LR48_Vigan01g190500
A0A0L9TQA4
LR48_Vigan01g190500
21
LLPS-Via-1297
LR48_Vigan01g195300
A0A0L9TPJ8
LR48_Vigan01g195300
22
LLPS-Via-1886
LR48_Vigan01g206800
A0A0L9TQ28
LR48_Vigan01g206800
23
LLPS-Via-1939
LR48_Vigan01g209300
A0A0L9TQ50
LR48_Vigan01g209300
24
LLPS-Via-0195
LR48_Vigan01g213500
A0A0L9TQY5
LR48_Vigan01g213500
25
LLPS-Via-0670
LR48_Vigan01g221700
A0A0L9TQA7
LR48_Vigan01g221700
26
LLPS-Via-2303
LR48_Vigan01g222300
A0A0L9TQH7
LR48_Vigan01g222300
27
LLPS-Via-1892
LR48_Vigan01g228200
A0A0L9TQG9
LR48_Vigan01g228200
28
LLPS-Via-0346
LR48_Vigan01g234700
A0A0L9TQM8
LR48_Vigan01g234700
29
LLPS-Via-2206
LR48_Vigan01g240600
A0A0L9TQL2
LR48_Vigan01g240600
30
LLPS-Via-1419
LR48_Vigan01g247400
A0A0L9TQQ3
LR48_Vigan01g247400
31
LLPS-Via-0648
LR48_Vigan01g248100
A0A0L9TQU1
LR48_Vigan01g248100
32
LLPS-Via-0521
LR48_Vigan01g249800
A0A0L9TRB0
LR48_Vigan01g249800
33
LLPS-Via-2423
LR48_Vigan01g253200
A0A0L9TR73
LR48_Vigan01g253200
34
LLPS-Via-2305
LR48_Vigan01g263500
A0A0L9TSF1
LR48_Vigan01g263500
35
LLPS-Via-0290
LR48_Vigan01g266200
A0A0L9TRI8
LR48_Vigan01g266200
36
LLPS-Via-0838
LR48_Vigan01g272700
A0A0L9TRQ5
LR48_Vigan01g272700
37
LLPS-Via-0672
LR48_Vigan01g277700
A0A0L9TRV7
LR48_Vigan01g277700
38
LLPS-Via-1218
LR48_Vigan01g277800
A0A0L9TRZ7
LR48_Vigan01g277800
39
LLPS-Via-0476
LR48_Vigan01g282100
A0A0L9TRV3
LR48_Vigan01g282100
40
LLPS-Via-0423
LR48_Vigan01g287500
A0A0L9TT25
LR48_Vigan01g287500
41
LLPS-Via-1559
LR48_Vigan01g296800
A0A0L9TSK8
LR48_Vigan01g296800
42
LLPS-Via-0714
LR48_Vigan01g297300
A0A0L9TSL6
LR48_Vigan01g297300
43
LLPS-Via-1295
LR48_Vigan01g304000
A0A0L9TTK9
LR48_Vigan01g304000
44
LLPS-Via-0472
LR48_Vigan01g315100
A0A0L9UYR6
LR48_Vigan01g315100
45
LLPS-Via-2417
LR48_Vigan01g335700
A0A0L9TTH0
LR48_Vigan01g335700
46
LLPS-Via-0562
LR48_Vigan02g007000
A0A0L9TTP7
LR48_Vigan02g007000
47
LLPS-Via-0257
LR48_Vigan02g025600
A0A0L9TUD0
LR48_Vigan02g025600
48
LLPS-Via-1123
LR48_Vigan02g029100
A0A0L9TUG2
LR48_Vigan02g029100
49
LLPS-Via-1571
LR48_Vigan02g037800
A0A0L9TUG0
LR48_Vigan02g037800
50
LLPS-Via-1610
LR48_Vigan02g045200
A0A0L9TV59
LR48_Vigan02g045200
51
LLPS-Via-0876
LR48_Vigan02g059100
A0A0L9TVE6
LR48_Vigan02g059100
52
LLPS-Via-1497
LR48_Vigan02g065700
A0A0L9TVT6
LR48_Vigan02g065700
53
LLPS-Via-1127
LR48_Vigan02g090400
A0A0L9TX42
LR48_Vigan02g090400
54
LLPS-Via-0252
LR48_Vigan02g097700
A0A0L9TWM5
LR48_Vigan02g097700
55
LLPS-Via-0564
LR48_Vigan02g098500
A0A0L9TWA6
LR48_Vigan02g098500
56
LLPS-Via-1408
LR48_Vigan02g098600
A0A0L9TWG1
LR48_Vigan02g098600
57
LLPS-Via-1847
LR48_Vigan02g121000
A0A0L9TX01
LR48_Vigan02g121000
58
LLPS-Via-1182
LR48_Vigan02g166600
A0A0L9TYE5
LR48_Vigan02g166600
59
LLPS-Via-2375
LR48_Vigan02g171900
A0A0L9TZH4
LR48_Vigan02g171900
60
LLPS-Via-2041
LR48_Vigan02g183500
A0A0L9TYR7
LR48_Vigan02g183500
61
LLPS-Via-1212
LR48_Vigan02g198900
A0A0L9U095
LR48_Vigan02g198900
62
LLPS-Via-0140
LR48_Vigan02g209200
A0A0L9TZX4
LR48_Vigan02g209200
63
LLPS-Via-1340
LR48_Vigan02g211100
A0A0L9TZP6
LR48_Vigan02g211100
64
LLPS-Via-0740
LR48_Vigan02g215000
A0A0L9TZP1
LR48_Vigan02g215000
65
LLPS-Via-1345
LR48_Vigan02g215900
A0A0L9U0T4
LR48_Vigan02g215900
66
LLPS-Via-0891
LR48_Vigan02g229700
A0A0L9U0F2
LR48_Vigan02g229700
67
LLPS-Via-1002
LR48_Vigan02g237400
A0A0L9U1C0
LR48_Vigan02g237400
68
LLPS-Via-1854
LR48_Vigan02g251400
A0A0L9U1S0
LR48_Vigan02g251400
69
LLPS-Via-1603
LR48_Vigan02g253200
A0A0L9U117
LR48_Vigan02g253200
70
LLPS-Via-1196
LR48_Vigan02g255900
A0A0L9U1W8
LR48_Vigan02g255900
71
LLPS-Via-0437
LR48_Vigan02g256200
A0A0L9U149
LR48_Vigan02g256200
72
LLPS-Via-1484
LR48_Vigan02g256300
A0A0L9U0R3
LR48_Vigan02g256300
73
LLPS-Via-2248
LR48_Vigan02g263100
A0A0L9U150
LR48_Vigan02g263100
74
LLPS-Via-0793
LR48_Vigan02g264400
A0A0L9U272
LR48_Vigan02g264400
75
LLPS-Via-0221
LR48_Vigan02g266000
A0A0L9U161
LR48_Vigan02g266000
76
LLPS-Via-1090
LR48_Vigan02g268200
A0A0L9U1J3
LR48_Vigan02g268200
77
LLPS-Via-0156
LR48_Vigan02g272800
A0A0L9U180
LR48_Vigan02g272800
78
LLPS-Via-0308
LR48_Vigan02g273100
A0A0L9U1D9
LR48_Vigan02g273100
79
LLPS-Via-2198
LR48_Vigan02g273300
A0A0L9U185
LR48_Vigan02g273300
80
LLPS-Via-1500
LR48_Vigan03g004600
A0A0L9U1K5
LR48_Vigan03g004600
81
LLPS-Via-1241
LR48_Vigan03g006500
A0A0L9VGD2
LR48_Vigan03g006500
82
LLPS-Via-1078
LR48_Vigan03g011800
A0A0L9U235
LR48_Vigan03g011800
83
LLPS-Via-2218
LR48_Vigan03g012900
A0A0L9U1Q0
LR48_Vigan03g012900
84
LLPS-Via-0483
LR48_Vigan03g037600
A0A0L9U2J0
LR48_Vigan03g037600
85
LLPS-Via-0163
LR48_Vigan03g064000
A0A0L9U4C7
LR48_Vigan03g064000
86
LLPS-Via-1703
LR48_Vigan03g064700
A0A0L9U3B3
LR48_Vigan03g064700
87
LLPS-Via-0803
LR48_Vigan03g085000
A0A0L9U3T2
LR48_Vigan03g085000
88
LLPS-Via-0065
LR48_Vigan03g118400
A0A0L9U547
LR48_Vigan03g118400
89
LLPS-Via-0271
LR48_Vigan03g125900
A0A0L9U5A9
LR48_Vigan03g125900
90
LLPS-Via-0558
LR48_Vigan03g144000
A0A0L9U5F7
LR48_Vigan03g144000
91
LLPS-Via-1143
LR48_Vigan03g155600
A0A0L9U6V1
LR48_Vigan03g155600
92
LLPS-Via-1302
LR48_Vigan03g165700
A0A0L9U662
LR48_Vigan03g165700
93
LLPS-Via-0760
LR48_Vigan03g207500
A0A0L9U7B0
LR48_Vigan03g207500
94
LLPS-Via-0578
LR48_Vigan03g207600
A0A0L9U8B1
LR48_Vigan03g207600
95
LLPS-Via-0181
LR48_Vigan03g212000
A0A0L9U7E8
LR48_Vigan03g212000
96
LLPS-Via-0421
LR48_Vigan03g223700
A0A0L9U7Q4
LR48_Vigan03g223700
97
LLPS-Via-0572
LR48_Vigan03g230200
A0A0L9U7W6
LR48_Vigan03g230200
98
LLPS-Via-1216
LR48_Vigan03g232700
A0A0L9U833
LR48_Vigan03g232700
99
LLPS-Via-1012
LR48_Vigan03g242800
A0A0L9U8J2
LR48_Vigan03g242800
100
LLPS-Via-0511
LR48_Vigan03g245000
A0A0L9U8H9
LR48_Vigan03g245000
101
LLPS-Via-1956
LR48_Vigan03g256900
A0A0L9U9B5
LR48_Vigan03g256900
102
LLPS-Via-0030
LR48_Vigan03g264300
A0A0L9U970
LR48_Vigan03g264300
103
LLPS-Via-0748
LR48_Vigan03g274600
A0A0L9UA05
LR48_Vigan03g274600
104
LLPS-Via-1551
LR48_Vigan03g283500
A0A0L9U9P5
LR48_Vigan03g283500
105
LLPS-Via-0970
LR48_Vigan03g290800
A0A0L9UA23
LR48_Vigan03g290800
106
LLPS-Via-0171
LR48_Vigan03g292300
A0A0L9UMD2
LR48_Vigan03g292300
107
LLPS-Via-0199
LR48_Vigan03g295000
A0A0L9U9Z9
LR48_Vigan03g295000
108
LLPS-Via-0024
LR48_Vigan03g310200
A0A0L9U9X5
LR48_Vigan03g310200
109
LLPS-Via-1440
LR48_Vigan04g010900
A0A0L9UB27
LR48_Vigan04g010900
110
LLPS-Via-0598
LR48_Vigan04g011100
A0A0L9UAY7
LR48_Vigan04g011100
111
LLPS-Via-2039
LR48_Vigan04g013300
A0A0L9UAH2
LR48_Vigan04g013300
112
LLPS-Via-0729
LR48_Vigan04g029700
A0A0L9UC54
LR48_Vigan04g029700
113
LLPS-Via-0626
LR48_Vigan04g033600
A0A0L9UBK3
LR48_Vigan04g033600
114
LLPS-Via-1096
LR48_Vigan04g043800
A0A0L9UBC4
LR48_Vigan04g043800
115
LLPS-Via-0964
LR48_Vigan04g046600
A0A0L9UBX6
LR48_Vigan04g046600
116
LLPS-Via-1468
LR48_Vigan04g063700
A0A0L9UD58
LR48_Vigan04g063700
117
LLPS-Via-1117
LR48_Vigan04g064700
A0A0L9UD65
LR48_Vigan04g064700
118
LLPS-Via-1010
LR48_Vigan04g086600
A0A0L9UD32
LR48_Vigan04g086600
119
LLPS-Via-1748
LR48_Vigan04g088300
A0A0L9UCM7
LR48_Vigan04g088300
120
LLPS-Via-0647
LR48_Vigan04g094500
A0A0L9UDX5
LR48_Vigan04g094500
121
LLPS-Via-0836
LR48_Vigan04g116100
A0A0L9UE15
LR48_Vigan04g116100
122
LLPS-Via-0210
LR48_Vigan04g116200
A0A0L9UEK3
LR48_Vigan04g116200
123
LLPS-Via-0194
LR48_Vigan04g121300
A0A0L9UDN3
LR48_Vigan04g121300
124
LLPS-Via-1496
LR48_Vigan04g139600
A0A0L9UEM5
LR48_Vigan04g139600
125
LLPS-Via-2300
LR48_Vigan04g163000
A0A0L9UFT9
LR48_Vigan04g163000
126
LLPS-Via-0389
LR48_Vigan04g166000
A0A0L9UFY8
LR48_Vigan04g166000
127
LLPS-Via-1930
LR48_Vigan04g171400
A0A0L9UFP1
LR48_Vigan04g171400
128
LLPS-Via-1504
LR48_Vigan04g171900
A0A0L9UFP6
LR48_Vigan04g171900
129
LLPS-Via-0083
LR48_Vigan04g186800
A0A0L9UFI5
LR48_Vigan04g186800
130
LLPS-Via-0618
LR48_Vigan04g192600
A0A0L9UG55
LR48_Vigan04g192600
131
LLPS-Via-2376
LR48_Vigan04g198000
A0A0L9UGT6
LR48_Vigan04g198000
132
LLPS-Via-1334
LR48_Vigan04g198300
A0A0L9UFU6
LR48_Vigan04g198300
133
LLPS-Via-0949
LR48_Vigan04g202500
A0A0L9UGX7
LR48_Vigan04g202500
134
LLPS-Via-1023
LR48_Vigan04g207900
A0A0L9UGN8
LR48_Vigan04g207900
135
LLPS-Via-0079
LR48_Vigan04g211000
A0A0L9UH67
LR48_Vigan04g211000
136
LLPS-Via-0822
LR48_Vigan04g215600
A0A0L9UVB1
LR48_Vigan04g215600
137
LLPS-Via-1362
LR48_Vigan04g220900
A0A0L9UH66
LR48_Vigan04g220900
138
LLPS-Via-0054
LR48_Vigan04g224000
A0A0L9UHK5
LR48_Vigan04g224000
139
LLPS-Via-1330
LR48_Vigan04g227700
A0A0L9UHR2
LR48_Vigan04g227700
140
LLPS-Via-1151
LR48_Vigan04g229600
A0A0L9UH68
LR48_Vigan04g229600
141
LLPS-Via-0132
LR48_Vigan04g242500
A0A0L9UI38
LR48_Vigan04g242500
142
LLPS-Via-0908
LR48_Vigan05g005100
A0A0L9UIT1
LR48_Vigan05g005100
143
LLPS-Via-0897
LR48_Vigan05g007900
A0A0L9UHX3
LR48_Vigan05g007900
144
LLPS-Via-1529
LR48_Vigan05g008200
A0A0L9UIB6
LR48_Vigan05g008200
145
LLPS-Via-1967
LR48_Vigan05g014800
A0A0L9UJ16
LR48_Vigan05g014800
146
LLPS-Via-0422
LR48_Vigan05g021700
A0A0L9UIM6
LR48_Vigan05g021700
147
LLPS-Via-0989
LR48_Vigan05g022600
A0A0L9UJ87
LR48_Vigan05g022600
148
LLPS-Via-0727
LR48_Vigan05g041000
A0A0L9UJD1
LR48_Vigan05g041000
149
LLPS-Via-0045
LR48_Vigan05g067300
A0A0L9UKJ2
LR48_Vigan05g067300
150
LLPS-Via-0393
LR48_Vigan05g067400
A0A0L9UJL8
LR48_Vigan05g067400
151
LLPS-Via-2008
LR48_Vigan05g097600
A0A0L9ULC4
LR48_Vigan05g097600
152
LLPS-Via-1868
LR48_Vigan05g099500
A0A0L9UL19
LR48_Vigan05g099500
153
LLPS-Via-0238
LR48_Vigan05g100700
A0A0L9UKW5
LR48_Vigan05g100700
154
LLPS-Via-0007
LR48_Vigan05g132700
A0A0L9UMC8
LR48_Vigan05g132700
155
LLPS-Via-2001
LR48_Vigan05g159500
A0A0L9UM86
LR48_Vigan05g159500
156
LLPS-Via-2190
LR48_Vigan05g166100
A0A0L9UMY8
LR48_Vigan05g166100
157
LLPS-Via-1338
LR48_Vigan05g192600
A0A0L9UNM6
LR48_Vigan05g192600
158
LLPS-Via-0170
LR48_Vigan05g221300
A0A0L9UPE8
LR48_Vigan05g221300
159
LLPS-Via-0954
LR48_Vigan05g228500
A0A0L9UP52
LR48_Vigan05g228500
160
LLPS-Via-2363
LR48_Vigan05g230000
A0A0L9UP66
LR48_Vigan05g230000
161
LLPS-Via-0924
LR48_Vigan06g011100
A0A0L9UPH2
LR48_Vigan06g011100
162
LLPS-Via-2403
LR48_Vigan06g012900
A0A0L9UQ01
LR48_Vigan06g012900
163
LLPS-Via-0095
LR48_Vigan06g017200
A0A0L9UQ75
LR48_Vigan06g017200
164
LLPS-Via-1089
LR48_Vigan06g040400
A0A0L9UQS2
LR48_Vigan06g040400
165
LLPS-Via-1146
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339
LLPS-Via-1044
LR48_Vigan11g007600
A0A0L9VQM5
LSM1
340
LLPS-Via-0304
LR48_Vigan03g279100
A0A0L9UA49
MCM7
341
LLPS-Via-0697
LR48_Vigan10g005300
A0A0L9VGJ1
PFK